Benjamin Chidester

Affiliations

Computational Biology Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA, USA.

Publications (5)

Rotation equivariant and invariant neural networks for microscopy image analysis.

Bioinformatics (Oxford, England)

Avec: Benjamin Chidester , Tianming Zhou , Minh N Do , Jian Ma

A Multi-Organ Nucleus Segmentation Challenge.

IEEE transactions on medical imaging

Avec: Neeraj Kumar , Ruchika Verma , Deepak Anand , Yanning Zhou , Omer Fahri Onder , Efstratios Tsougenis , Hao Chen , Pheng-Ann Heng , Jiahui Li , Zhiqiang Hu , Yunzhi Wang , Navid Alemi Koohbanani , Mostafa Jahanifar , Neda Zamani Tajeddin , Ali Gooya , Nasir Rajpoot , Xuhua Ren , Sihang Zhou , Qian Wang , Dinggang Shen , Cheng-Kun Yang , Chi-Hung Weng , Wei-Hsiang Yu , Chao-Yuan Yeh , Shuang Yang , Shuoyu Xu , Pak Hei Yeung , Peng Sun , Amirreza Mahbod , Gerald Schaefer , Isabella Ellinger , Rupert Ecker , Orjan Smedby , Chunliang Wang , Benjamin Chidester , That-Vinh Ton , Minh-Triet Tran , Jian Ma , Minh N Do , Simon Graham , Quoc Dang Vu , Jin Tae Kwak , Akshaykumar Gunda , Raviteja Chunduri , Corey Hu , Xiaoyang Zhou , Dariush Lotfi , Reza Safdari , Antanas Kascenas , Alison O'Neil , Dennis Eschweiler , Johannes Stegmaier , Yanping Cui , Baocai Yin , Kailin Chen , Xinmei Tian , Philipp Gruening , Erhardt Barth , Elad Arbel , Itay Remer , Amir Ben-Dor , Ekaterina Sirazitdinova , Matthias Kohl , Stefan Braunewell , Yuexiang Li , Xinpeng Xie , Linlin Shen , Jun Ma , Krishanu Das Baksi , Mohammad Azam Khan , Jaegul Choo , Adrian Colomer , Valery Naranjo , Linmin Pei , Khan M Iftekharuddin , Kaushiki Roy , Debotosh Bhattacharjee , Anibal Pedraza , Maria Gloria Bueno , Sabarinathan Devanathan , Saravanan Radhakrishnan , Praveen Koduganty , Zihan Wu , Guanyu Cai , Xiaojie Liu , Yuqin Wang , Amit Sethi

SPICEMIX enables integrative single-cell spatial modeling of cell identity.

Nature genetics

Avec: Benjamin Chidester , Tianming Zhou , Shahul Alam , Jian Ma

Discovery and generalization of tissue structures from spatial omics data.

Cell reports methods

Avec: Zhenqin Wu , Ayano Kondo , Monee McGrady , Ethan A G Baker , Benjamin Chidester , Eric Wu , Maha K Rahim , Nathan A Bracey , Vivek Charu , Raymond J Cho , Jeffrey B Cheng , Maryam Afkarian , James Zou , Aaron T Mayer , Alexandro E Trevino

Ultrasensitive Three-Dimensional Orientation Imaging of Single Molecules on Plasmonic Nanohole Arrays Using Second Harmonic Generation.

Nano letters

Avec: Sushant P Sahu , Amirreza Mahigir , Benjamin Chidester , Georgios Veronis , Manas Ranjan Gartia

Réseau de co-auteurs

Jian Ma 3 collaborations

Tianming Zhou 2 collaborations

Minh N Do 2 collaborations

Neeraj Kumar 1 collaboration

Ruchika Verma 1 collaboration

Deepak Anand 1 collaboration

Yanning Zhou 1 collaboration

Omer Fahri Onder 1 collaboration

Efstratios Tsougenis 1 collaboration

Hao Chen 1 collaboration

Pheng-Ann Heng 1 collaboration

Jiahui Li 1 collaboration

Zhiqiang Hu 1 collaboration

Yunzhi Wang 1 collaboration

Navid Alemi Koohbanani 1 collaboration

Mostafa Jahanifar 1 collaboration

Neda Zamani Tajeddin 1 collaboration

Ali Gooya 1 collaboration

Nasir Rajpoot 1 collaboration

Xuhua Ren 1 collaboration

Sihang Zhou 1 collaboration

Qian Wang 1 collaboration

Dinggang Shen 1 collaboration

Cheng-Kun Yang 1 collaboration

Chi-Hung Weng 1 collaboration

Wei-Hsiang Yu 1 collaboration

Chao-Yuan Yeh 1 collaboration

Shuang Yang 1 collaboration

Shuoyu Xu 1 collaboration

Pak Hei Yeung 1 collaboration

Peng Sun 1 collaboration

Amirreza Mahbod 1 collaboration

Gerald Schaefer 1 collaboration

Isabella Ellinger 1 collaboration

Rupert Ecker 1 collaboration

Orjan Smedby 1 collaboration

Chunliang Wang 1 collaboration

That-Vinh Ton 1 collaboration

Minh-Triet Tran 1 collaboration

Simon Graham 1 collaboration

Quoc Dang Vu 1 collaboration

Jin Tae Kwak 1 collaboration

Akshaykumar Gunda 1 collaboration

Raviteja Chunduri 1 collaboration

Corey Hu 1 collaboration

Xiaoyang Zhou 1 collaboration

Dariush Lotfi 1 collaboration

Reza Safdari 1 collaboration

Antanas Kascenas 1 collaboration

Alison O'Neil 1 collaboration

Dennis Eschweiler 1 collaboration

Johannes Stegmaier 1 collaboration

Yanping Cui 1 collaboration

Baocai Yin 1 collaboration

Kailin Chen 1 collaboration

Xinmei Tian 1 collaboration

Philipp Gruening 1 collaboration

Erhardt Barth 1 collaboration

Elad Arbel 1 collaboration

Itay Remer 1 collaboration

Amir Ben-Dor 1 collaboration

Ekaterina Sirazitdinova 1 collaboration

Matthias Kohl 1 collaboration

Stefan Braunewell 1 collaboration

Yuexiang Li 1 collaboration

Xinpeng Xie 1 collaboration

Linlin Shen 1 collaboration

Jun Ma 1 collaboration

Krishanu Das Baksi 1 collaboration

Mohammad Azam Khan 1 collaboration

Jaegul Choo 1 collaboration

Adrian Colomer 1 collaboration

Valery Naranjo 1 collaboration

Linmin Pei 1 collaboration

Khan M Iftekharuddin 1 collaboration

Kaushiki Roy 1 collaboration

Debotosh Bhattacharjee 1 collaboration

Anibal Pedraza 1 collaboration

Maria Gloria Bueno 1 collaboration

Sabarinathan Devanathan 1 collaboration

Saravanan Radhakrishnan 1 collaboration

Praveen Koduganty 1 collaboration

Zihan Wu 1 collaboration

Guanyu Cai 1 collaboration

Xiaojie Liu 1 collaboration

Yuqin Wang 1 collaboration

Amit Sethi 1 collaboration

Shahul Alam 1 collaboration

Zhenqin Wu 1 collaboration

Ayano Kondo 1 collaboration

Monee McGrady 1 collaboration

Ethan A G Baker 1 collaboration

Eric Wu 1 collaboration

Maha K Rahim 1 collaboration

Nathan A Bracey 1 collaboration

Vivek Charu 1 collaboration

Raymond J Cho 1 collaboration

Jeffrey B Cheng 1 collaboration

Maryam Afkarian 1 collaboration

James Zou 1 collaboration

Aaron T Mayer 1 collaboration

Alexandro E Trevino 1 collaboration

Sushant P Sahu 1 collaboration

Amirreza Mahigir 1 collaboration

Georgios Veronis 1 collaboration

Manas Ranjan Gartia 1 collaboration