Daniel Wüthrich

Affiliations

Interfaculty Bioinformatics Unit, University of Bern, Bern, Switzerland.

Publications (24)

Publisher Correction: Engineering bacterial symbionts of nematodes improves their biocontrol potential to counter the western corn rootworm.

Nature biotechnology

Avec: Ricardo A R Machado , Lisa Thönen , Carla C M Arce , Vanitha Theepan , Fausto Prada , Daniel Wüthrich , Christelle A M Robert , Evangelia Vogiatzaki , Yi-Ming Shi , Olivier P Schaeren , Matheus Notter , Rémy Bruggmann , Siegfried Hapfelmeier , Helge B Bode , Matthias Erb

A Novel Lineage of Ceftriaxone-resistant Salmonella Typhi From India That Is Closely Related to XDR S. Typhi Found in Pakistan.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Ranjit Sah , Suzanne Donovan , Helena M B Seth-Smith , Guido Bloemberg , Daniel Wüthrich , Roger Stephan , Sushila Kataria , Mahadevan Kumar , Sonam Singla , Vikas Deswal , Amarjeet Kaur , Andreas Neumayr , Vladimira Hinic , Adrian Egli , Esther Kuenzli

Effects of the novel concept 'outdoor veal calf' on antimicrobial use, mortality and weight gain in Switzerland.

Preventive veterinary medicine

Avec: J Becker , G Schüpbach-Regula , A Steiner , V Perreten , D Wüthrich , A Hausherr , M Meylan

Nosocomial transmission of a

Infection control and hospital epidemiology

Avec: Andrea C Büchler , Daniel Wüthrich , Melanie Wicki Jauslin , Adrian Egli , Andreas F Widmer

Rapid and Ultrasensitive Detection of Mutations and Genes Relevant to Antimicrobial Resistance in Bacteria.

Global challenges (Hoboken, NJ)

Avec: François Huber , Hans Peter Lang , Daniela Lang , Daniel Wüthrich , Vladimira Hinić , Christoph Gerber , Adrian Egli , Ernst Meyer

Optimization of

Applied radiation and isotopes : including data, instrumentation and methods for use in agriculture, industry and medicine

Avec: S Braccini , T S Carzaniga , G Dellepiane , P V Grundler , P Scampoli , N P van der Meulen , D Wüthrich

Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study.

Genome medicine

Avec: Aline Cuénod , Daniel Wüthrich , Helena M B Seth-Smith , Chantal Ott , Christian Gehringer , Frédéric Foucault , Roxanne Mouchet , Ali Kassim , Gunturu Revathi , Deborah R Vogt , Stefanie von Felten , Stefano Bassetti , Sarah Tschudin-Sutter , Timm Hettich , Götz Schlotterbeck , Christina Homberger , Carlo Casanova , Jacob Moran-Gilad , Orli Sagi , Belén Rodríguez-Sánchez , Franco Müller , Martina Aerni , Valeria Gaia , Helke van Dessel , Greetje A Kampinga , Claudia Müller , Claudia Daubenberger , Valentin Pflüger , Adrian Egli

A dataset of floating debris accumulation at bridges after July 2021 flood in Germany and Belgium.

Scientific data

Avec: Sébastien Erpicum , Daan Poppema , Lisa Burghardt , Loïc Benet , Davide Wüthrich , Elena-Maria Klopries , Benjamin Dewals

Prototyping a Tool for Processing Genetic Meta-Data in Microbiological Laboratories.

Studies in health technology and informatics

Avec: Jan Aeschimann , Silvan Huber , Daniel Wüthrich , Helena Seth-Smith , Jürgen Holm , Thomas Bürkle , Murat Sariyar

Antibiotic and quaternary ammonium compound resistance in Escherichia coli from calves at the beginning of the -fattening period in Switzerland (2017).

Schweizer Archiv fur Tierheilkunde

Avec: A Hausherr , J Becker , M Meylan , D Wüthrich , A Collaud , A Rossano , V Perreten

Gene expression in chronic granulomatous disease and interferon-γ receptor-deficient cells treated in vitro with interferon-γ.

Journal of cellular biochemistry

Avec: Josias B Frazão , Martino Colombo , Cedric Simillion , Adem Bilican , Irene Keller , Daniel Wüthrich , Zhiqing Zhu , Michal J Okoniewski , Rémy Bruggmann , Antonio Condino-Neto , Peter E Newburger

Evaluation of two workflows for whole genome sequencing-based typing of influenza A viruses.

Journal of virological methods

Avec: Daniel Wüthrich , Daniela Lang , Nicola F Müller , Richard A Neher , Tanja Stadler , Adrian Egli

Interferon-λ Enhances the Differentiation of Naive B Cells into Plasmablasts via the mTORC1 Pathway.

Cell reports

Avec: Mohammedyaseen Syedbasha , Ferdinando Bonfiglio , Janina Linnik , Claudia Stuehler , Daniel Wüthrich , Adrian Egli

A rationally designed oral vaccine induces immunoglobulin A in the murine gut that directs the evolution of attenuated Salmonella variants.

Nature microbiology

Avec: Médéric Diard , Erik Bakkeren , Verena Lentsch , Andrea Rocker , Nahimi Amare Bekele , Daniel Hoces , Selma Aslani , Markus Arnoldini , Flurina Böhi , Kathrin Schumann-Moor , Jozef Adamcik , Luca Piccoli , Antonio Lanzavecchia , Beth M Stadtmueller , Nicholas Donohue , Marjan W van der Woude , Alyson Hockenberry , Patrick H Viollier , Laurent Falquet , Daniel Wüthrich , Ferdinando Bonfiglio , Claude Loverdo , Adrian Egli , Giorgia Zandomeneghi , Raffaele Mezzenga , Otto Holst , Beat H Meier , Wolf-Dietrich Hardt , Emma Slack

Influence of optimisation parameters on directly deliverable Pareto fronts explored for prostate cancer.

Physica medica : PM : an international journal devoted to the applications of physics to medicine and biology : official journal of the Italian Association of Biomedical Physics (AIFB)

Avec: Diana Wüthrich , Michele Zeverino , Jean Bourhis , François Bochud , Raphaël Moeckli

Identification of influenza urban transmission patterns by geographical, epidemiological and whole genome sequencing data: protocol for an observational study.

BMJ open

Avec: Adrian Egli , Claudia Saalfrank , Nina Goldman , Myrta Brunner , Yvonne Hollenstein , Thomas Vogel , Noémie Augustin , Daniel Wüthrich , Helena M B Seth-Smith , Elisa Roth , Mohammedyaseen Syedbasha , Nicola F Mueller , Dominik Vogt , Jan Bauer , Nadezhda Amar-Sliwa , Dominik M Meinel , Olivier Dubuis , Michael Naegele , Sarah Tschudin-Sutter , Andreas Buser , Christian H Nickel , Andreas Zeller , Nicole Ritz , Manuel Battegay , Tanja Stadler , Rita Schneider-Sliwa

Carbon source regulates polysaccharide capsule biosynthesis in

The Journal of biological chemistry

Avec: Lukas J Troxler , Joel P Werren , Thierry O Schaffner , Nadezda Mostacci , Peter Vermathen , Martina Vermathen , Daniel Wüthrich , Cedric Simillion , Silvio D Brugger , Rémy Bruggmann , Lucy J Hathaway , Julien Furrer , Markus Hilty

Air-conditioner cooling towers as complex reservoirs and continuous source of

Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin

Avec: Daniel Wüthrich , Sylvia Gautsch , Ruth Spieler-Denz , Olivier Dubuis , Valeria Gaia , Jacob Moran-Gilad , Vladimira Hinic , Helena Mb Seth-Smith , Christian H Nickel , Sarah Tschudin-Sutter , Stefano Bassetti , Monika Haenggi , Peter Brodmann , Simon Fuchs , Adrian Egli

A Novel Trimethoprim Resistance Gene,

mSphere

Avec: Dominik Wüthrich , Michael Brilhante , Anna Hausherr , Jens Becker , Mireille Meylan , Vincent Perreten

In Silico Comparison Shows that the Pan-Genome of a Dairy-Related Bacterial Culture Collection Covers Most Reactions Annotated to Human Microbiomes.

Microorganisms

Avec: Thomas Roder , Daniel Wüthrich , Cornelia Bär , Zahra Sattari , Ueli von Ah , Francesca Ronchi , Andrew J Macpherson , Stephanie C Ganal-Vonarburg , Rémy Bruggmann , Guy Vergères

Siblings with typhoid fever: An investigation of intrafamilial transmission, clonality, and antibiotic susceptibility.

Travel medicine and infectious disease

Avec: Patrick M Meyer Sauteur , Marc J A Stevens , Paolo Paioni , Daniel Wüthrich , Adrian Egli , Roger Stephan , Christoph Berger , Guido V Bloemberg

Prosthetic valve endocarditis caused by Pseudomonas aeruginosa with variable antibacterial resistance profiles: a diagnostic challenge.

BMC infectious diseases

Avec: Nicolas Gürtler , Michael Osthoff , Florian Rueter , Daniel Wüthrich , Lukas Zimmerli , Adrian Egli , Stefano Bassetti

Ensemble-statistical approach in the measurement of air-water flow properties in highly unsteady breaking bores.

The Review of scientific instruments

Avec: Davide Wüthrich , Rui Shi , Hubert Chanson

Impact of Copper-Doped Mesoporous Bioactive Glass Nanospheres on the Polymerisation Kinetics and Shrinkage Stress of Dental Resin Composites.

International journal of molecular sciences

Avec: Danijela Marovic , Matej Par , Tobias T Tauböck , Håvard J Haugen , Visnja Negovetic Mandic , Damian Wüthrich , Phoebe Burrer , Kai Zheng , Thomas Attin , Zrinka Tarle , Aldo R Boccaccini

Réseau de co-auteurs

Adrian Egli 11 collaborations

Rémy Bruggmann 4 collaborations

Helena M B Seth-Smith 3 collaborations

D Wüthrich 3 collaborations

Stefano Bassetti 3 collaborations

Sarah Tschudin-Sutter 3 collaborations

Roger Stephan 2 collaborations

Vladimira Hinic 2 collaborations

J Becker 2 collaborations

V Perreten 2 collaborations

A Hausherr 2 collaborations

M Meylan 2 collaborations

Daniela Lang 2 collaborations

Jacob Moran-Gilad 2 collaborations

Valeria Gaia 2 collaborations

Davide Wüthrich 2 collaborations

Cedric Simillion 2 collaborations

Tanja Stadler 2 collaborations

Mohammedyaseen Syedbasha 2 collaborations

Ferdinando Bonfiglio 2 collaborations

Olivier Dubuis 2 collaborations

Christian H Nickel 2 collaborations

Ricardo A R Machado 1 collaboration

Lisa Thönen 1 collaboration

Carla C M Arce 1 collaboration

Vanitha Theepan 1 collaboration

Fausto Prada 1 collaboration

Christelle A M Robert 1 collaboration

Evangelia Vogiatzaki 1 collaboration

Yi-Ming Shi 1 collaboration

Olivier P Schaeren 1 collaboration

Matheus Notter 1 collaboration

Siegfried Hapfelmeier 1 collaboration

Helge B Bode 1 collaboration

Matthias Erb 1 collaboration

Ranjit Sah 1 collaboration

Suzanne Donovan 1 collaboration

Guido Bloemberg 1 collaboration

Sushila Kataria 1 collaboration

Mahadevan Kumar 1 collaboration

Sonam Singla 1 collaboration

Vikas Deswal 1 collaboration

Amarjeet Kaur 1 collaboration

Andreas Neumayr 1 collaboration

Esther Kuenzli 1 collaboration

G Schüpbach-Regula 1 collaboration

A Steiner 1 collaboration

Andrea C Büchler 1 collaboration

Melanie Wicki Jauslin 1 collaboration

Andreas F Widmer 1 collaboration

François Huber 1 collaboration

Hans Peter Lang 1 collaboration

Vladimira Hinić 1 collaboration

Christoph Gerber 1 collaboration

Ernst Meyer 1 collaboration

S Braccini 1 collaboration

T S Carzaniga 1 collaboration

G Dellepiane 1 collaboration

P V Grundler 1 collaboration

P Scampoli 1 collaboration

N P van der Meulen 1 collaboration

Aline Cuénod 1 collaboration

Chantal Ott 1 collaboration

Christian Gehringer 1 collaboration

Frédéric Foucault 1 collaboration

Roxanne Mouchet 1 collaboration

Ali Kassim 1 collaboration

Gunturu Revathi 1 collaboration

Deborah R Vogt 1 collaboration

Stefanie von Felten 1 collaboration

Timm Hettich 1 collaboration

Götz Schlotterbeck 1 collaboration

Christina Homberger 1 collaboration

Carlo Casanova 1 collaboration

Orli Sagi 1 collaboration

Belén Rodríguez-Sánchez 1 collaboration

Franco Müller 1 collaboration

Martina Aerni 1 collaboration

Helke van Dessel 1 collaboration

Greetje A Kampinga 1 collaboration

Claudia Müller 1 collaboration

Claudia Daubenberger 1 collaboration

Valentin Pflüger 1 collaboration

Sébastien Erpicum 1 collaboration

Daan Poppema 1 collaboration

Lisa Burghardt 1 collaboration

Loïc Benet 1 collaboration

Elena-Maria Klopries 1 collaboration

Benjamin Dewals 1 collaboration

Jan Aeschimann 1 collaboration

Silvan Huber 1 collaboration

Helena Seth-Smith 1 collaboration

Jürgen Holm 1 collaboration

Thomas Bürkle 1 collaboration

Murat Sariyar 1 collaboration

A Collaud 1 collaboration

A Rossano 1 collaboration

Josias B Frazão 1 collaboration

Martino Colombo 1 collaboration

Adem Bilican 1 collaboration

Irene Keller 1 collaboration

Zhiqing Zhu 1 collaboration

Michal J Okoniewski 1 collaboration

Antonio Condino-Neto 1 collaboration

Peter E Newburger 1 collaboration

Nicola F Müller 1 collaboration

Richard A Neher 1 collaboration

Janina Linnik 1 collaboration

Claudia Stuehler 1 collaboration

Médéric Diard 1 collaboration

Erik Bakkeren 1 collaboration

Verena Lentsch 1 collaboration

Andrea Rocker 1 collaboration

Nahimi Amare Bekele 1 collaboration

Daniel Hoces 1 collaboration

Selma Aslani 1 collaboration

Markus Arnoldini 1 collaboration

Flurina Böhi 1 collaboration

Kathrin Schumann-Moor 1 collaboration

Jozef Adamcik 1 collaboration

Luca Piccoli 1 collaboration

Antonio Lanzavecchia 1 collaboration

Beth M Stadtmueller 1 collaboration

Nicholas Donohue 1 collaboration

Marjan W van der Woude 1 collaboration

Alyson Hockenberry 1 collaboration

Patrick H Viollier 1 collaboration

Laurent Falquet 1 collaboration

Claude Loverdo 1 collaboration

Giorgia Zandomeneghi 1 collaboration

Raffaele Mezzenga 1 collaboration

Otto Holst 1 collaboration

Beat H Meier 1 collaboration

Wolf-Dietrich Hardt 1 collaboration

Emma Slack 1 collaboration

Diana Wüthrich 1 collaboration

Michele Zeverino 1 collaboration

Jean Bourhis 1 collaboration

François Bochud 1 collaboration

Raphaël Moeckli 1 collaboration

Claudia Saalfrank 1 collaboration

Nina Goldman 1 collaboration

Myrta Brunner 1 collaboration

Yvonne Hollenstein 1 collaboration

Thomas Vogel 1 collaboration

Noémie Augustin 1 collaboration

Elisa Roth 1 collaboration

Nicola F Mueller 1 collaboration

Dominik Vogt 1 collaboration

Jan Bauer 1 collaboration

Nadezhda Amar-Sliwa 1 collaboration

Dominik M Meinel 1 collaboration

Michael Naegele 1 collaboration

Andreas Buser 1 collaboration

Andreas Zeller 1 collaboration

Nicole Ritz 1 collaboration

Manuel Battegay 1 collaboration

Rita Schneider-Sliwa 1 collaboration

Lukas J Troxler 1 collaboration

Joel P Werren 1 collaboration

Thierry O Schaffner 1 collaboration

Nadezda Mostacci 1 collaboration

Peter Vermathen 1 collaboration

Martina Vermathen 1 collaboration

Silvio D Brugger 1 collaboration

Lucy J Hathaway 1 collaboration

Julien Furrer 1 collaboration

Markus Hilty 1 collaboration

Sylvia Gautsch 1 collaboration

Ruth Spieler-Denz 1 collaboration

Helena Mb Seth-Smith 1 collaboration

Monika Haenggi 1 collaboration

Peter Brodmann 1 collaboration

Simon Fuchs 1 collaboration

Dominik Wüthrich 1 collaboration

Michael Brilhante 1 collaboration

Anna Hausherr 1 collaboration

Jens Becker 1 collaboration

Mireille Meylan 1 collaboration

Vincent Perreten 1 collaboration

Thomas Roder 1 collaboration

Cornelia Bär 1 collaboration

Zahra Sattari 1 collaboration

Ueli von Ah 1 collaboration

Francesca Ronchi 1 collaboration

Andrew J Macpherson 1 collaboration

Stephanie C Ganal-Vonarburg 1 collaboration

Guy Vergères 1 collaboration

Patrick M Meyer Sauteur 1 collaboration

Marc J A Stevens 1 collaboration

Paolo Paioni 1 collaboration

Christoph Berger 1 collaboration

Guido V Bloemberg 1 collaboration

Nicolas Gürtler 1 collaboration

Michael Osthoff 1 collaboration

Florian Rueter 1 collaboration

Lukas Zimmerli 1 collaboration

Rui Shi 1 collaboration

Hubert Chanson 1 collaboration

Danijela Marovic 1 collaboration

Matej Par 1 collaboration

Tobias T Tauböck 1 collaboration

Håvard J Haugen 1 collaboration

Visnja Negovetic Mandic 1 collaboration

Damian Wüthrich 1 collaboration

Phoebe Burrer 1 collaboration

Kai Zheng 1 collaboration

Thomas Attin 1 collaboration

Zrinka Tarle 1 collaboration

Aldo R Boccaccini 1 collaboration