Daniel Zeiberg

Affiliations

Khoury College of Computer Sciences, Northeastern University, Boston, MA, USA.

Publications (6)

Critical assessment of variant prioritization methods for rare disease diagnosis within the Rare Genomes Project.

medRxiv : the preprint server for health sciences

Avec: Sarah L Stenton , Melanie O'Leary , Gabrielle Lemire , Grace E VanNoy , Stephanie DiTroia , Vijay S Ganesh , Emily Groopman , Emily O'Heir , Brian Mangilog , Ikeoluwa Osei-Owusu , Lynn S Pais , Jillian Serrano , Moriel Singer-Berk , Ben Weisburd , Michael Wilson , Christina Austin-Tse , Marwa Abdelhakim , Azza Althagafi , Giulia Babbi , Riccardo Bellazzi , Samuele Bovo , Maria Giulia Carta , Rita Casadio , Pieter-Jan Coenen , Federica De Paoli , Matteo Floris , Manavalan Gajapathy , Robert Hoehndorf , Julius O B Jacobsen , Thomas Joseph , Akash Kamandula , Panagiotis Katsonis , Cyrielle Kint , Olivier Lichtarge , Ivan Limongelli , Yulan Lu , Paolo Magni , Tarun Karthik Kumar Mamidi , Pier Luigi Martelli , Marta Mulargia , Giovanna Nicora , Keith Nykamp , Vikas Pejaver , Yisu Peng , Thi Hong Cam Pham , Maurizio S Podda , Aditya Rao , Ettore Rizzo , Vangala G Saipradeep , Castrense Savojardo , Peter Schols , Yang Shen , Naveen Sivadasan , Damian Smedley , Dorian Soru , Rajgopal Srinivasan , Yuanfei Sun , Uma Sunderam , Wuwei Tan , Naina Tiwari , Xiao Wang , Yaqiong Wang , Amanda Williams , Elizabeth A Worthey , Rujie Yin , Yuning You , Daniel Zeiberg , Susanna Zucca , Constantina Bakolitsa , Steven E Brenner , Stephanie M Fullerton , Predrag Radivojac , Heidi L Rehm , Anne O'Donnell-Luria

Evaluation of enzyme activity predictions for variants of unknown significance in Arylsulfatase A.

bioRxiv : the preprint server for biology

Avec: Shantanu Jain , Marena Trinidad , Thanh Binh Nguyen , Kaiya Jones , Santiago Diaz Neto , Fang Ge , Ailin Glagovsky , Cameron Jones , Giankaleb Moran , Boqi Wang , Kobra Rahimi , Sümeyra Zeynep Çalıcı , Luis R Cedillo , Silvia Berardelli , Buse Özden , Ken Chen , Panagiotis Katsonis , Amanda Williams , Olivier Lichtarge , Sadhna Rana , Swatantra Pradhan , Rajgopal Srinivasan , Rakshanda Sajeed , Dinesh Joshi , Eshel Faraggi , Robert Jernigan , Andrzej Kloczkowski , Jierui Xu , Zigang Song , Selen Özkan , Natàlia Padilla , Xavier de la Cruz , Rocio Acuna-Hidalgo , Andrea Grafmüller , Laura T Jiménez Barrón , Matteo Manfredi , Castrense Savojardo , Giulia Babbi , Pier Luigi Martelli , Rita Casadio , Yuanfei Sun , Shaowen Zhu , Yang Shen , Fabrizio Pucci , Marianne Rooman , Gabriel Cia , Daniele Raimondi , Pauline Hermans , Sofia Kwee , Ella Chen , Courtnery Astore , Akash Kamandula , Vikas Pejaver , Rashika Ramola , Michelle Velyunskiy , Daniel Zeiberg , Reet Mishra , Teague Sterling , Jennifer L Goldstein , Jose Lugo-Martinez , Sufyan Kazi , Sindy Li , Kinsey Long , Steven E Brenner , Constantina Bakolitsa , Predrag Radivojac , Dean Suhr , Teryn Suhr , Wyatt T Clark

Multi-objective prioritization of genes for high-throughput functional assays towards improved clinical variant classification.

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing

Avec: Yile Chen , Shantanu Jain , Daniel Zeiberg , Lilia M Iakoucheva , Sean D Mooney , Predrag Radivojac , Vikas Pejaver

Classification in biological networks with hypergraphlet kernels.

Bioinformatics (Oxford, England)

Avec: Jose Lugo-Martinez , Daniel Zeiberg , Thomas Gaudelet , Noël Malod-Dognin , Natasa Przulj , Predrag Radivojac

Critical assessment of variant prioritization methods for rare disease diagnosis within the rare genomes project.

Human genomics

Avec: Sarah L Stenton , Melanie C O'Leary , Gabrielle Lemire , Grace E VanNoy , Stephanie DiTroia , Vijay S Ganesh , Emily Groopman , Emily O'Heir , Brian Mangilog , Ikeoluwa Osei-Owusu , Lynn S Pais , Jillian Serrano , Moriel Singer-Berk , Ben Weisburd , Michael W Wilson , Christina Austin-Tse , Marwa Abdelhakim , Azza Althagafi , Giulia Babbi , Riccardo Bellazzi , Samuele Bovo , Maria Giulia Carta , Rita Casadio , Pieter-Jan Coenen , Federica De Paoli , Matteo Floris , Manavalan Gajapathy , Robert Hoehndorf , Julius O B Jacobsen , Thomas Joseph , Akash Kamandula , Panagiotis Katsonis , Cyrielle Kint , Olivier Lichtarge , Ivan Limongelli , Yulan Lu , Paolo Magni , Tarun Karthik Kumar Mamidi , Pier Luigi Martelli , Marta Mulargia , Giovanna Nicora , Keith Nykamp , Vikas Pejaver , Yisu Peng , Thi Hong Cam Pham , Maurizio S Podda , Aditya Rao , Ettore Rizzo , Vangala G Saipradeep , Castrense Savojardo , Peter Schols , Yang Shen , Naveen Sivadasan , Damian Smedley , Dorian Soru , Rajgopal Srinivasan , Yuanfei Sun , Uma Sunderam , Wuwei Tan , Naina Tiwari , Xiao Wang , Yaqiong Wang , Amanda Williams , Elizabeth A Worthey , Rujie Yin , Yuning You , Daniel Zeiberg , Susanna Zucca , Constantina Bakolitsa , Steven E Brenner , Stephanie M Fullerton , Predrag Radivojac , Heidi L Rehm , Anne O'Donnell-Luria

Machine learning for patient risk stratification for acute respiratory distress syndrome.

PloS one

Avec: Daniel Zeiberg , Tejas Prahlad , Brahmajee K Nallamothu , Theodore J Iwashyna , Jenna Wiens , Michael W Sjoding

Réseau de co-auteurs

Predrag Radivojac 5 collaborations

Vikas Pejaver 4 collaborations

Giulia Babbi 3 collaborations

Rita Casadio 3 collaborations

Akash Kamandula 3 collaborations

Panagiotis Katsonis 3 collaborations

Olivier Lichtarge 3 collaborations

Pier Luigi Martelli 3 collaborations

Castrense Savojardo 3 collaborations

Yang Shen 3 collaborations

Rajgopal Srinivasan 3 collaborations

Yuanfei Sun 3 collaborations

Amanda Williams 3 collaborations

Constantina Bakolitsa 3 collaborations

Steven E Brenner 3 collaborations

Sarah L Stenton 2 collaborations

Gabrielle Lemire 2 collaborations

Grace E VanNoy 2 collaborations

Stephanie DiTroia 2 collaborations

Vijay S Ganesh 2 collaborations

Emily Groopman 2 collaborations

Emily O'Heir 2 collaborations

Brian Mangilog 2 collaborations

Ikeoluwa Osei-Owusu 2 collaborations

Lynn S Pais 2 collaborations

Jillian Serrano 2 collaborations

Moriel Singer-Berk 2 collaborations

Ben Weisburd 2 collaborations

Christina Austin-Tse 2 collaborations

Marwa Abdelhakim 2 collaborations

Azza Althagafi 2 collaborations

Riccardo Bellazzi 2 collaborations

Samuele Bovo 2 collaborations

Maria Giulia Carta 2 collaborations

Pieter-Jan Coenen 2 collaborations

Federica De Paoli 2 collaborations

Matteo Floris 2 collaborations

Manavalan Gajapathy 2 collaborations

Robert Hoehndorf 2 collaborations

Julius O B Jacobsen 2 collaborations

Thomas Joseph 2 collaborations

Cyrielle Kint 2 collaborations

Ivan Limongelli 2 collaborations

Yulan Lu 2 collaborations

Paolo Magni 2 collaborations

Tarun Karthik Kumar Mamidi 2 collaborations

Marta Mulargia 2 collaborations

Giovanna Nicora 2 collaborations

Keith Nykamp 2 collaborations

Yisu Peng 2 collaborations

Thi Hong Cam Pham 2 collaborations

Maurizio S Podda 2 collaborations

Aditya Rao 2 collaborations

Ettore Rizzo 2 collaborations

Vangala G Saipradeep 2 collaborations

Peter Schols 2 collaborations

Naveen Sivadasan 2 collaborations

Damian Smedley 2 collaborations

Dorian Soru 2 collaborations

Uma Sunderam 2 collaborations

Wuwei Tan 2 collaborations

Naina Tiwari 2 collaborations

Xiao Wang 2 collaborations

Yaqiong Wang 2 collaborations

Elizabeth A Worthey 2 collaborations

Rujie Yin 2 collaborations

Yuning You 2 collaborations

Susanna Zucca 2 collaborations

Stephanie M Fullerton 2 collaborations

Heidi L Rehm 2 collaborations

Anne O'Donnell-Luria 2 collaborations

Shantanu Jain 2 collaborations

Jose Lugo-Martinez 2 collaborations

Melanie O'Leary 1 collaboration

Michael Wilson 1 collaboration

Marena Trinidad 1 collaboration

Thanh Binh Nguyen 1 collaboration

Kaiya Jones 1 collaboration

Santiago Diaz Neto 1 collaboration

Fang Ge 1 collaboration

Ailin Glagovsky 1 collaboration

Cameron Jones 1 collaboration

Giankaleb Moran 1 collaboration

Boqi Wang 1 collaboration

Kobra Rahimi 1 collaboration

Sümeyra Zeynep Çalıcı 1 collaboration

Luis R Cedillo 1 collaboration

Silvia Berardelli 1 collaboration

Buse Özden 1 collaboration

Ken Chen 1 collaboration

Sadhna Rana 1 collaboration

Swatantra Pradhan 1 collaboration

Rakshanda Sajeed 1 collaboration

Dinesh Joshi 1 collaboration

Eshel Faraggi 1 collaboration

Robert Jernigan 1 collaboration

Andrzej Kloczkowski 1 collaboration

Jierui Xu 1 collaboration

Zigang Song 1 collaboration

Selen Özkan 1 collaboration

Natàlia Padilla 1 collaboration

Xavier de la Cruz 1 collaboration

Rocio Acuna-Hidalgo 1 collaboration

Andrea Grafmüller 1 collaboration

Laura T Jiménez Barrón 1 collaboration

Matteo Manfredi 1 collaboration

Shaowen Zhu 1 collaboration

Fabrizio Pucci 1 collaboration

Marianne Rooman 1 collaboration

Gabriel Cia 1 collaboration

Daniele Raimondi 1 collaboration

Pauline Hermans 1 collaboration

Sofia Kwee 1 collaboration

Ella Chen 1 collaboration

Courtnery Astore 1 collaboration

Rashika Ramola 1 collaboration

Michelle Velyunskiy 1 collaboration

Reet Mishra 1 collaboration

Teague Sterling 1 collaboration

Jennifer L Goldstein 1 collaboration

Sufyan Kazi 1 collaboration

Sindy Li 1 collaboration

Kinsey Long 1 collaboration

Dean Suhr 1 collaboration

Teryn Suhr 1 collaboration

Wyatt T Clark 1 collaboration

Yile Chen 1 collaboration

Lilia M Iakoucheva 1 collaboration

Sean D Mooney 1 collaboration

Thomas Gaudelet 1 collaboration

Noël Malod-Dognin 1 collaboration

Natasa Przulj 1 collaboration

Melanie C O'Leary 1 collaboration

Michael W Wilson 1 collaboration

Tejas Prahlad 1 collaboration

Brahmajee K Nallamothu 1 collaboration

Theodore J Iwashyna 1 collaboration

Jenna Wiens 1 collaboration

Michael W Sjoding 1 collaboration