Dunja Simicic

Affiliations

CIBM Center for Biomedical Imaging, Lausanne, Switzerland.
Animal Imaging and Technology, Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland.
Laboratory of Functional and Metabolic Imaging (LIFMET), Ecole Polytechnique Federale de Lausanne (EPFL), Lausanne, Switzerland.

Publications (23)

Late post-natal neurometabolic development in healthy male rats using

Journal of neurochemistry

Avec: Veronika Račkayová , Dunja Simicic , Guillaume Donati , Olivier Braissant , Rolf Gruetter , Valérie A McLin , Cristina Cudalbu

Noise-reduction techniques for

NMR in biomedicine

Avec: Brayan Alves , Dunja Simicic , Jessie Mosso , Thanh Phong Lê , Guillaume Briand , Wolfgang Bogner , Bernard Lanz , Bernhard Strasser , Antoine Klauser , Cristina Cudalbu

Diffusion-weighted SPECIAL improves the detection of J-coupled metabolites at ultrahigh magnetic field.

Magnetic resonance in medicine

Avec: Jessie Mosso , Dunja Simicic , Bernard Lanz , Rolf Gruetter , Cristina Cudalbu

Reproducibility Made Easy: A Tool for Methodological Transparency and Efficient Standardized Reporting based on the proposed MRSinMRS Consensus.

ArXiv

Avec: Antonia Susnjar , Antonia Kaiser , Dunja Simicic , Gianna Nossa , Alexander Lin , Georg Oeltzschner , Aaron Gudmundson

In vivo macromolecule signals in rat brain

Magnetic resonance in medicine

Avec: Dunja Simicic , Veronika Rackayova , Lijing Xin , Ivan Tkáč , Tamas Borbath , Zenon Starcuk , Jana Starcukova , Bernard Lanz , Cristina Cudalbu

Inhibition of urease-mediated ammonia production by 2-octynohydroxamic acid in hepatic encephalopathy.

Nature communications

Avec: Diana Evstafeva , Filip Ilievski , Yinyin Bao , Zhi Luo , Boris Abramovic , Sunghyun Kang , Christian Steuer , Elita Montanari , Tommaso Casalini , Dunja Simicic , Dario Sessa , Stefanita-Octavian Mitrea , Katarzyna Pierzchala , Cristina Cudalbu , Chelsie E Armbruster , Jean-Christophe Leroux

GABA-edited MEGA-PRESS at 3 T: Does a measured macromolecule background improve linear combination modeling?

Magnetic resonance in medicine

Avec: Christopher W Davies-Jenkins , Helge J Zöllner , Dunja Simicic , Steve C N Hui , Yulu Song , Kathleen E Hupfeld , James J Prisciandaro , Richard A E Edden , Georg Oeltzschner

Metabolite T

NMR in biomedicine

Avec: Saipavitra Murali-Manohar , Aaron T Gudmundson , Kathleen E Hupfeld , Helge J Zöllner , Steve C N Hui , Yulu Song , Dunja Simicic , Christopher W Davies-Jenkins , Tao Gong , Guangbin Wang , Georg Oeltzschner , Richard A E Edden

Data-driven determination of

bioRxiv : the preprint server for biology

Avec: Christopher W Davies-Jenkins , Helge J Zöllner , Dunja Simicic , Seyma Alcicek , Richard A E Edden , Georg Oeltzschner

Central nervous system and systemic oxidative stress interplay with inflammation in a bile duct ligation rat model of type C hepatic encephalopathy.

Free radical biology & medicine

Avec: K Pierzchala , D Simicic , A Sienkiewicz , D Sessa , S Mitrea , O Braissant , V A McLin , R Gruetter , C Cudalbu

Abnormal brain oxygen homeostasis in an animal model of liver disease.

JHEP reports : innovation in hepatology

Avec: Anna Hadjihambi , Cristina Cudalbu , Katarzyna Pierzchala , Dunja Simicic , Chris Donnelly , Christos Konstantinou , Nathan Davies , Abeba Habtesion , Alexander V Gourine , Rajiv Jalan , Patrick S Hosford

Model-based frequency-and-phase correction of

bioRxiv : the preprint server for biology

Avec: Dunja Simicic , Helge J Zöllner , Christopher W Davies-Jenkins , Kathleen E Hupfeld , Richard A E Edden , Georg Oeltzschner

Model-based frequency-and-phase correction of

Magnetic resonance in medicine

Avec: Dunja Simicic , Helge J Zöllner , Christopher W Davies-Jenkins , Kathleen E Hupfeld , Richard A E Edden , Georg Oeltzschner

Metabolite T

Magnetic resonance in medicine

Avec: Kathleen E Hupfeld , Saipavitra Murali-Manohar , Helge J Zöllner , Yulu Song , Christopher W Davies-Jenkins , Aaron T Gudmundson , Dunja Simicic , Gizeaddis Lamesgin Simegn , Emily E Carter , Steve C N Hui , Vivek Yedavalli , Georg Oeltzschner , Eric C Porges , Richard A E Edden

Contribution of macromolecules to brain

NMR in biomedicine

Avec: Cristina Cudalbu , Kevin L Behar , Pallab K Bhattacharyya , Wolfgang Bogner , Tamas Borbath , Robin A de Graaf , Rolf Gruetter , Anke Henning , Christoph Juchem , Roland Kreis , Phil Lee , Hongxia Lei , Małgorzata Marjańska , Ralf Mekle , Saipavitra Murali-Manohar , Michal Považan , Veronika Rackayová , Dunja Simicic , Johannes Slotboom , Brian J Soher , Zenon Starčuk , Jana Starčuková , Ivan Tkáč , Stephen Williams , Martin Wilson , Andrew Martin Wright , Lijing Xin , Vladimír Mlynárik

A new rat model of creatine transporter deficiency reveals behavioral disorder and altered brain metabolism.

Scientific reports

Avec: Lara Duran-Trio , Gabriella Fernandes-Pires , Dunja Simicic , Jocelyn Grosse , Clothilde Roux-Petronelli , Stephen J Bruce , Pierre-Alain Binz , Carmen Sandi , Cristina Cudalbu , Olivier Braissant

PET CMR

Analytical biochemistry

Avec: Jessie Mosso , Ting Yin , Carole Poitry-Yamate , Dunja Simicic , Mario Lepore , Valérie A McLin , Olivier Braissant , Cristina Cudalbu , Bernard Lanz

Overview of oxidative stress findings in hepatic encephalopathy: From cellular and ammonium-based animal models to human data.

Analytical biochemistry

Avec: D Simicic , C Cudalbu , K Pierzchala

MP-PCA denoising for diffusion MRS data: promises and pitfalls.

NeuroImage

Avec: Jessie Mosso , Dunja Simicic , Kadir Şimşek , Roland Kreis , Cristina Cudalbu , Ileana O Jelescu

Neurometabolic changes in a rat pup model of type C hepatic encephalopathy depend on age at liver disease onset.

Metabolic brain disease

Avec: Dunja Simicic , Veronika Rackayova , Olivier Braissant , Christian Toso , Graziano Oldani , Dario Sessa , Valérie A McLin , Cristina Cudalbu

Simultaneous multi-transient linear-combination modeling of MRS data improves uncertainty estimation.

Magnetic resonance in medicine

Avec: Helge Jörn Zöllner , Christopher Davies-Jenkins , Dunja Simicic , Assaf Tal , Jeremias Sulam , Georg Oeltzschner

Diffusion of brain metabolites highlights altered brain microstructure in type C hepatic encephalopathy: a 9.4 T preliminary study.

Frontiers in neuroscience

Avec: Jessie Mosso , Guillaume Briand , Katarzyna Pierzchala , Dunja Simicic , Alejandra Sierra , Ali Abdollahzadeh , Ileana O Jelescu , Cristina Cudalbu

Simultaneous multi-transient linear-combination modeling of MRS data improves uncertainty estimation.

bioRxiv : the preprint server for biology

Avec: Helge J Zöllner , Christopher Davies-Jenkins , Dunja Simicic , Assaf Tal , Jeremias Sulam , Georg Oeltzschner

Réseau de co-auteurs

Cristina Cudalbu 12 collaborations

Georg Oeltzschner 9 collaborations

Helge J Zöllner 7 collaborations

Christopher W Davies-Jenkins 6 collaborations

Richard A E Edden 6 collaborations

Jessie Mosso 5 collaborations

Kathleen E Hupfeld 5 collaborations

Olivier Braissant 4 collaborations

Bernard Lanz 4 collaborations

Rolf Gruetter 3 collaborations

Valérie A McLin 3 collaborations

Katarzyna Pierzchala 3 collaborations

Steve C N Hui 3 collaborations

Yulu Song 3 collaborations

Saipavitra Murali-Manohar 3 collaborations

Guillaume Briand 2 collaborations

Wolfgang Bogner 2 collaborations

Veronika Rackayova 2 collaborations

Lijing Xin 2 collaborations

Ivan Tkáč 2 collaborations

Tamas Borbath 2 collaborations

Dario Sessa 2 collaborations

Aaron T Gudmundson 2 collaborations

K Pierzchala 2 collaborations

D Simicic 2 collaborations

C Cudalbu 2 collaborations

Roland Kreis 2 collaborations

Ileana O Jelescu 2 collaborations

Christopher Davies-Jenkins 2 collaborations

Assaf Tal 2 collaborations

Jeremias Sulam 2 collaborations

Veronika Račkayová 1 collaboration

Guillaume Donati 1 collaboration

Brayan Alves 1 collaboration

Thanh Phong Lê 1 collaboration

Bernhard Strasser 1 collaboration

Antoine Klauser 1 collaboration

Antonia Susnjar 1 collaboration

Antonia Kaiser 1 collaboration

Gianna Nossa 1 collaboration

Alexander Lin 1 collaboration

Aaron Gudmundson 1 collaboration

Zenon Starcuk 1 collaboration

Jana Starcukova 1 collaboration

Diana Evstafeva 1 collaboration

Filip Ilievski 1 collaboration

Yinyin Bao 1 collaboration

Zhi Luo 1 collaboration

Boris Abramovic 1 collaboration

Sunghyun Kang 1 collaboration

Christian Steuer 1 collaboration

Elita Montanari 1 collaboration

Tommaso Casalini 1 collaboration

Stefanita-Octavian Mitrea 1 collaboration

Chelsie E Armbruster 1 collaboration

Jean-Christophe Leroux 1 collaboration

James J Prisciandaro 1 collaboration

Tao Gong 1 collaboration

Guangbin Wang 1 collaboration

Seyma Alcicek 1 collaboration

A Sienkiewicz 1 collaboration

D Sessa 1 collaboration

S Mitrea 1 collaboration

O Braissant 1 collaboration

V A McLin 1 collaboration

R Gruetter 1 collaboration

Anna Hadjihambi 1 collaboration

Chris Donnelly 1 collaboration

Christos Konstantinou 1 collaboration

Nathan Davies 1 collaboration

Abeba Habtesion 1 collaboration

Alexander V Gourine 1 collaboration

Rajiv Jalan 1 collaboration

Patrick S Hosford 1 collaboration

Gizeaddis Lamesgin Simegn 1 collaboration

Emily E Carter 1 collaboration

Vivek Yedavalli 1 collaboration

Eric C Porges 1 collaboration

Kevin L Behar 1 collaboration

Pallab K Bhattacharyya 1 collaboration

Robin A de Graaf 1 collaboration

Anke Henning 1 collaboration

Christoph Juchem 1 collaboration

Phil Lee 1 collaboration

Hongxia Lei 1 collaboration

Małgorzata Marjańska 1 collaboration

Ralf Mekle 1 collaboration

Michal Považan 1 collaboration

Veronika Rackayová 1 collaboration

Johannes Slotboom 1 collaboration

Brian J Soher 1 collaboration

Zenon Starčuk 1 collaboration

Jana Starčuková 1 collaboration

Stephen Williams 1 collaboration

Martin Wilson 1 collaboration

Andrew Martin Wright 1 collaboration

Vladimír Mlynárik 1 collaboration

Lara Duran-Trio 1 collaboration

Gabriella Fernandes-Pires 1 collaboration

Jocelyn Grosse 1 collaboration

Clothilde Roux-Petronelli 1 collaboration

Stephen J Bruce 1 collaboration

Pierre-Alain Binz 1 collaboration

Carmen Sandi 1 collaboration

Ting Yin 1 collaboration

Carole Poitry-Yamate 1 collaboration

Mario Lepore 1 collaboration

Kadir Şimşek 1 collaboration

Christian Toso 1 collaboration

Graziano Oldani 1 collaboration

Helge Jörn Zöllner 1 collaboration

Alejandra Sierra 1 collaboration

Ali Abdollahzadeh 1 collaboration