Jacques Colinge

Affiliations

IRCM, Université de Montpellier, ICM, Montpellier, France.

Publications (22)

Notch inhibition overcomes resistance to tyrosine kinase inhibitors in EGFR-driven lung adenocarcinoma.

The Journal of clinical investigation

Avec: Emilie Bousquet Mur , Sara Bernardo , Laura Papon , Maicol Mancini , Eric Fabbrizio , Marion Goussard , Irene Ferrer , Anais Giry , Xavier Quantin , Jean-Louis Pujol , Olivier Calvayrac , Herwig P Moll , Yaël Glasson , Nelly Pirot , Andrei Turtoi , Marta Cañamero , Kwok-Kin Wong , Yosef Yarden , Emilio Casanova , Jean-Charles Soria , Jacques Colinge , Christian W Siebel , Julien Mazieres , Gilles Favre , Luis Paz-Ares , Antonio Maraver

Machine Learning-Assisted Evaluation of Circulating DNA Quantitative Analysis for Cancer Screening.

Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Avec: Rita Tanos , Guillaume Tosato , Amaelle Otandault , Zahra Al Amir Dache , Laurence Pique Lasorsa , Geoffroy Tousch , Safia El Messaoudi , Romain Meddeb , Mona Diab Assaf , Marc Ychou , Stanislas Du Manoir , Denis Pezet , Johan Gagnière , Pierre-Emmanuel Colombo , William Jacot , Eric Assénat , Marie Dupuy , Antoine Adenis , Thibault Mazard , Caroline Mollevi , José María Sayagués , Jacques Colinge , Alain R Thierry

Design and selection of optimal ErbB-targeting bispecific antibodies in pancreatic cancer.

Frontiers in immunology

Avec: Emilia Rabia , Véronique Garambois , Christine Dhommée , Christel Larbouret , Laurie Lajoie , Yoan Buscail , Gabriel Jimenez-Dominguez , Sylvie Choblet-Thery , Emmanuelle Liaudet-Coopman , Martine Cerutti , Marta Jarlier , Patrice Ravel , Laurent Gros , Nelly Pirot , Gilles Thibault , Eugene A Zhukovsky , Pierre-Emmanuel Gérard , André Pèlegrin , Jacques Colinge , Thierry Chardès

In Vivo Large-Scale Mapping of Protein Turnover in Human Cerebrospinal Fluid.

Analytical chemistry

Avec: Sylvain Lehmann , Christophe Hirtz , Jérôme Vialaret , Maxence Ory , Guillaume Gras Combes , Marine Le Corre , Stéphanie Badiou , Jean-Paul Cristol , Olivier Hanon , Emmanuel Cornillot , Luc Bauchet , Audrey Gabelle , Jacques Colinge

Prediction of response to promising first-line chemotherapy in ovarian cancer patients with residual peritoneal tumors: practical biomarkers and robust multiplex models.

International journal of clinical oncology

Avec: Reika Kawabata-Iwakawa , Norihiro Iwasa , Kenichi Satoh , Jacques Colinge , Muneaki Shimada , Satoshi Takeuchi , Hiroyuki Fujiwara , Hidetaka Eguchi , Tetsuro Oishi , Toru Sugiyama , Mitsuaki Suzuki , Kosei Hasegawa , Keiichi Fujiwara , Masahiko Nishiyama

FT-GPI, a highly sensitive and accurate predictor of GPI-anchored proteins, reveals the composition and evolution of the GPI proteome in Plasmodium species.

Malaria journal

Avec: Lena M Sauer , Rodrigo Canovas , Daniel Roche , Hosam Shams-Eldin , Patrice Ravel , Jacques Colinge , Ralph T Schwarz , Choukri Ben Mamoun , Eric Rivals , Emmanuel Cornillot

The Prognostic Impact of the Aryl Hydrocarbon Receptor (AhR) in Primary Breast Cancer Depends on the Lymph Node Status.

International journal of molecular sciences

Avec: Udo Jeschke , Xi Zhang , Christina Kuhn , Stéphan Jalaguier , Jacques Colinge , Kristina Pfender , Doris Mayr , Nina Ditsch , Nadia Harbeck , Sven Mahner , Sophie Sixou , Vincent Cavaillès

Modular response analysis reformulated as a multilinear regression problem.

Bioinformatics (Oxford, England)

Avec: Jean-Pierre Borg , Jacques Colinge , Patrice Ravel

Modeling the Simultaneous Dynamics of Proteins in Blood Plasma and the Cerebrospinal Fluid in Human

Journal of proteome research

Avec: Pierre Giroux , Jérôme Vialaret , Jana Kindermans , Audrey Gabelle , Luc Bauchet , Christophe Hirtz , Sylvain Lehmann , Jacques Colinge

Detection of soluble biomarkers of pancreatic cancer in endoscopic ultrasound-guided fine-needle aspiration samples.

Endoscopy

Avec: Régis Souche , Guillaume Tosato , Benjamin Rivière , Jean-Christophe Valats , Antoine Debourdeau , Nicolas Flori , Didier Pourquier , Jean-Michel Fabre , Eric Assenat , Jacques Colinge , Andrei Turtoi

Mechanisms underlying the cooperation between loss of epithelial polarity and Notch signaling during neoplastic growth in Drosophila.

Development (Cambridge, England)

Avec: Rémi Logeay , Charles Géminard , Patrice Lassus , Miriam Rodríguez-Vázquez , Diala Kantar , Lisa Heron-Milhavet , Bettina Fischer , Sarah J Bray , Jacques Colinge , Alexandre Djiane

Application of modular response analysis to medium- to large-size biological systems.

PLoS computational biology

Avec: Meriem Mekedem , Patrice Ravel , Jacques Colinge

Circulating DNA reveals a specific and higher fragmentation of the Y chromosome.

Human genetics

Avec: Alain R Thierry , Cynthia Sanchez , Jacques Colinge , Ekaterina Pisareva

SingleCellSignalR: inference of intercellular networks from single-cell transcriptomics.

Nucleic acids research

Avec: Simon Cabello-Aguilar , Mélissa Alame , Fabien Kon-Sun-Tack , Caroline Fau , Matthieu Lacroix , Jacques Colinge

Distinct oncogenes drive different genome and epigenome alterations in human mammary epithelial cells.

International journal of cancer

Avec: Claire Fonti , Anne Saumet , Amanda Abi-Khalil , Béatrice Orsetti , Elouan Cleroux , Ambre Bender , Michael Dumas , Emeline Schmitt , Jacques Colinge , William Jacot , Michael Weber , Claude Sardet , Stanislas du Manoir , Charles Theillet

An R package for generic modular response analysis and its application to estrogen and retinoic acid receptor crosstalk.

Scientific reports

Avec: Gabriel Jimenez-Dominguez , Patrice Ravel , Stéphan Jalaguier , Vincent Cavaillès , Jacques Colinge

Transcriptomic and genomic heterogeneity in blastic plasmacytoid dendritic cell neoplasms: from ontogeny to oncogenesis.

Blood advances

Avec: Florian Renosi , Anne Roggy , Ambre Giguelay , Lou Soret , Pierre-Julien Viailly , Meyling Cheok , Sabeha Biichle , Fanny Angelot-Delettre , Vahid Asnafi , Elizabeth Macintyre , Sandrine Geffroy , Mary Callanan , Tony Petrella , Eric Deconinck , Etienne Daguindau , Véronique Harrivel , Sabrina Bouyer , Véronique Salaun , Pascale Saussoy , Jean Feuillard , Pascal Fuseau , Philippe Saas , Olivier Adotévi , Fabrice Jardin , Christophe Ferrand , Claude Preudhomme , Jacques Colinge , Christophe Roumier , Francine Garnache-Ottou

MAGI1 inhibits the AMOTL2/p38 stress pathway and prevents luminal breast tumorigenesis.

Scientific reports

Avec: Diala Kantar , Emilie Bousquet Mur , Maicol Mancini , Vera Slaninova , Yezza Ben Salah , Luca Costa , Elodie Forest , Patrice Lassus , Charles Géminard , Florence Boissière-Michot , Béatrice Orsetti , Charles Theillet , Jacques Colinge , Christine Benistant , Antonio Maraver , Lisa Heron-Milhavet , Alexandre Djiane

Mechanical signatures of human colon cancers.

Scientific reports

Avec: Evelyne Lopez-Crapez , Luca Costa , Guillaume Tosato , Jeanne Ramos , Thibault Mazard , Janique Guiramand , Alain Thierry , Jacques Colinge , Pierre-Emmanuel Milhiet , Christine Bénistant

Inferring ligand-receptor cellular networks from bulk and spatial transcriptomic datasets with BulkSignalR.

Nucleic acids research

Avec: Jean-Philippe Villemin , Laia Bassaganyas , Didier Pourquier , Florence Boissière , Simon Cabello-Aguilar , Evelyne Crapez , Rita Tanos , Emmanuel Cornillot , Andrei Turtoi , Jacques Colinge

Farnesyltransferase inhibition overcomes oncogene-addicted non-small cell lung cancer adaptive resistance to targeted therapies.

Nature communications

Avec: Sarah Figarol , Célia Delahaye , Rémi Gence , Aurélia Doussine , Juan Pablo Cerapio , Mathylda Brachais , Claudine Tardy , Nicolas Béry , Raghda Asslan , Jacques Colinge , Jean-Philippe Villemin , Antonio Maraver , Irene Ferrer , Luis Paz-Ares , Linda Kessler , Francis Burrows , Isabelle Lajoie-Mazenc , Vincent Dongay , Clara Morin , Amélie Florent , Sandra Pagano , Estelle Taranchon-Clermont , Anne Casanova , Anne Pradines , Julien Mazieres , Gilles Favre , Olivier Calvayrac

Enabling Population Protein Dynamics Through Bayesian Modeling.

Bioinformatics (Oxford, England)

Avec: Sylvain Lehmann , Jérôme Vialaret , Audrey Gabelle , Luc Bauchet , Jean-Philippe Villemin , Christophe Hirtz , Jacques Colinge

Réseau de co-auteurs

Patrice Ravel 5 collaborations

Andrei Turtoi 3 collaborations

Antonio Maraver 3 collaborations

Guillaume Tosato 3 collaborations

Sylvain Lehmann 3 collaborations

Christophe Hirtz 3 collaborations

Jérôme Vialaret 3 collaborations

Emmanuel Cornillot 3 collaborations

Luc Bauchet 3 collaborations

Audrey Gabelle 3 collaborations

Jean-Philippe Villemin 3 collaborations

Emilie Bousquet Mur 2 collaborations

Maicol Mancini 2 collaborations

Irene Ferrer 2 collaborations

Olivier Calvayrac 2 collaborations

Nelly Pirot 2 collaborations

Julien Mazieres 2 collaborations

Gilles Favre 2 collaborations

Luis Paz-Ares 2 collaborations

Rita Tanos 2 collaborations

William Jacot 2 collaborations

Thibault Mazard 2 collaborations

Alain R Thierry 2 collaborations

Gabriel Jimenez-Dominguez 2 collaborations

Stéphan Jalaguier 2 collaborations

Vincent Cavaillès 2 collaborations

Didier Pourquier 2 collaborations

Charles Géminard 2 collaborations

Patrice Lassus 2 collaborations

Diala Kantar 2 collaborations

Lisa Heron-Milhavet 2 collaborations

Alexandre Djiane 2 collaborations

Simon Cabello-Aguilar 2 collaborations

Béatrice Orsetti 2 collaborations

Charles Theillet 2 collaborations

Luca Costa 2 collaborations

Sara Bernardo 1 collaboration

Laura Papon 1 collaboration

Eric Fabbrizio 1 collaboration

Marion Goussard 1 collaboration

Anais Giry 1 collaboration

Xavier Quantin 1 collaboration

Jean-Louis Pujol 1 collaboration

Herwig P Moll 1 collaboration

Yaël Glasson 1 collaboration

Marta Cañamero 1 collaboration

Kwok-Kin Wong 1 collaboration

Yosef Yarden 1 collaboration

Emilio Casanova 1 collaboration

Jean-Charles Soria 1 collaboration

Christian W Siebel 1 collaboration

Amaelle Otandault 1 collaboration

Zahra Al Amir Dache 1 collaboration

Laurence Pique Lasorsa 1 collaboration

Geoffroy Tousch 1 collaboration

Safia El Messaoudi 1 collaboration

Romain Meddeb 1 collaboration

Mona Diab Assaf 1 collaboration

Marc Ychou 1 collaboration

Stanislas Du Manoir 1 collaboration

Denis Pezet 1 collaboration

Johan Gagnière 1 collaboration

Pierre-Emmanuel Colombo 1 collaboration

Eric Assénat 1 collaboration

Marie Dupuy 1 collaboration

Antoine Adenis 1 collaboration

Caroline Mollevi 1 collaboration

José María Sayagués 1 collaboration

Emilia Rabia 1 collaboration

Véronique Garambois 1 collaboration

Christine Dhommée 1 collaboration

Christel Larbouret 1 collaboration

Laurie Lajoie 1 collaboration

Yoan Buscail 1 collaboration

Sylvie Choblet-Thery 1 collaboration

Emmanuelle Liaudet-Coopman 1 collaboration

Martine Cerutti 1 collaboration

Marta Jarlier 1 collaboration

Laurent Gros 1 collaboration

Gilles Thibault 1 collaboration

Eugene A Zhukovsky 1 collaboration

Pierre-Emmanuel Gérard 1 collaboration

André Pèlegrin 1 collaboration

Thierry Chardès 1 collaboration

Maxence Ory 1 collaboration

Guillaume Gras Combes 1 collaboration

Marine Le Corre 1 collaboration

Stéphanie Badiou 1 collaboration

Jean-Paul Cristol 1 collaboration

Olivier Hanon 1 collaboration

Reika Kawabata-Iwakawa 1 collaboration

Norihiro Iwasa 1 collaboration

Kenichi Satoh 1 collaboration

Muneaki Shimada 1 collaboration

Satoshi Takeuchi 1 collaboration

Hiroyuki Fujiwara 1 collaboration

Hidetaka Eguchi 1 collaboration

Tetsuro Oishi 1 collaboration

Toru Sugiyama 1 collaboration

Mitsuaki Suzuki 1 collaboration

Kosei Hasegawa 1 collaboration

Keiichi Fujiwara 1 collaboration

Masahiko Nishiyama 1 collaboration

Lena M Sauer 1 collaboration

Rodrigo Canovas 1 collaboration

Daniel Roche 1 collaboration

Hosam Shams-Eldin 1 collaboration

Ralph T Schwarz 1 collaboration

Choukri Ben Mamoun 1 collaboration

Eric Rivals 1 collaboration

Udo Jeschke 1 collaboration

Xi Zhang 1 collaboration

Christina Kuhn 1 collaboration

Kristina Pfender 1 collaboration

Doris Mayr 1 collaboration

Nina Ditsch 1 collaboration

Nadia Harbeck 1 collaboration

Sven Mahner 1 collaboration

Sophie Sixou 1 collaboration

Jean-Pierre Borg 1 collaboration

Pierre Giroux 1 collaboration

Jana Kindermans 1 collaboration

Régis Souche 1 collaboration

Benjamin Rivière 1 collaboration

Jean-Christophe Valats 1 collaboration

Antoine Debourdeau 1 collaboration

Nicolas Flori 1 collaboration

Jean-Michel Fabre 1 collaboration

Eric Assenat 1 collaboration

Rémi Logeay 1 collaboration

Miriam Rodríguez-Vázquez 1 collaboration

Bettina Fischer 1 collaboration

Sarah J Bray 1 collaboration

Meriem Mekedem 1 collaboration

Cynthia Sanchez 1 collaboration

Ekaterina Pisareva 1 collaboration

Mélissa Alame 1 collaboration

Fabien Kon-Sun-Tack 1 collaboration

Caroline Fau 1 collaboration

Matthieu Lacroix 1 collaboration

Claire Fonti 1 collaboration

Anne Saumet 1 collaboration

Amanda Abi-Khalil 1 collaboration

Elouan Cleroux 1 collaboration

Ambre Bender 1 collaboration

Michael Dumas 1 collaboration

Emeline Schmitt 1 collaboration

Michael Weber 1 collaboration

Claude Sardet 1 collaboration

Stanislas du Manoir 1 collaboration

Florian Renosi 1 collaboration

Anne Roggy 1 collaboration

Ambre Giguelay 1 collaboration

Lou Soret 1 collaboration

Pierre-Julien Viailly 1 collaboration

Meyling Cheok 1 collaboration

Sabeha Biichle 1 collaboration

Fanny Angelot-Delettre 1 collaboration

Vahid Asnafi 1 collaboration

Elizabeth Macintyre 1 collaboration

Sandrine Geffroy 1 collaboration

Mary Callanan 1 collaboration

Tony Petrella 1 collaboration

Eric Deconinck 1 collaboration

Etienne Daguindau 1 collaboration

Véronique Harrivel 1 collaboration

Sabrina Bouyer 1 collaboration

Véronique Salaun 1 collaboration

Pascale Saussoy 1 collaboration

Jean Feuillard 1 collaboration

Pascal Fuseau 1 collaboration

Philippe Saas 1 collaboration

Olivier Adotévi 1 collaboration

Fabrice Jardin 1 collaboration

Christophe Ferrand 1 collaboration

Claude Preudhomme 1 collaboration

Christophe Roumier 1 collaboration

Francine Garnache-Ottou 1 collaboration

Vera Slaninova 1 collaboration

Yezza Ben Salah 1 collaboration

Elodie Forest 1 collaboration

Florence Boissière-Michot 1 collaboration

Christine Benistant 1 collaboration

Evelyne Lopez-Crapez 1 collaboration

Jeanne Ramos 1 collaboration

Janique Guiramand 1 collaboration

Alain Thierry 1 collaboration

Pierre-Emmanuel Milhiet 1 collaboration

Christine Bénistant 1 collaboration

Laia Bassaganyas 1 collaboration

Florence Boissière 1 collaboration

Evelyne Crapez 1 collaboration

Sarah Figarol 1 collaboration

Célia Delahaye 1 collaboration

Rémi Gence 1 collaboration

Aurélia Doussine 1 collaboration

Juan Pablo Cerapio 1 collaboration

Mathylda Brachais 1 collaboration

Claudine Tardy 1 collaboration

Nicolas Béry 1 collaboration

Raghda Asslan 1 collaboration

Linda Kessler 1 collaboration

Francis Burrows 1 collaboration

Isabelle Lajoie-Mazenc 1 collaboration

Vincent Dongay 1 collaboration

Clara Morin 1 collaboration

Amélie Florent 1 collaboration

Sandra Pagano 1 collaboration

Estelle Taranchon-Clermont 1 collaboration

Anne Casanova 1 collaboration

Anne Pradines 1 collaboration