Jason Bobe

Affiliations

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, United States.

Publications (25)

Evolution of sex hormone binding globulins reveals early gene duplication at the root of vertebrates.

General and comparative endocrinology

Avec: Yann Guiguen , Jeremy Pasquier , Alexis Fostier , Julien Bobe

Predicting Lyme Disease From Patients' Peripheral Blood Mononuclear Cells Profiled With RNA-Sequencing.

Frontiers in immunology

Avec: Daniel J B Clarke , Alison W Rebman , Allison Bailey , Megan L Wojciechowicz , Sherry L Jenkins , John E Evangelista , Matteo Danieletto , Jinshui Fan , Mark W Eshoo , Michael R Mosel , William Robinson , Nitya Ramadoss , Jason Bobe , Mark J Soloski , John N Aucott , Avi Ma'ayan

Deciphering sex-specific miRNAs as heat-recorders in zebrafish.

Scientific reports

Avec: Tosca A van Gelderen , Jérôme Montfort , José Antonio Álvarez-Dios , Violette Thermes , Francesc Piferrer , Julien Bobe , Laia Ribas

The role of multiple vitellogenins in early development of fishes.

General and comparative endocrinology

Avec: Ozlem Yilmaz , Craig V Sullivan , Julien Bobe , Birgitta Norberg

What makes a bad egg? Egg transcriptome reveals dysregulation of translational machinery and novel fertility genes important for fertilization.

BMC genomics

Avec: Caroline T Cheung , Thao-Vi Nguyen , Aurélie Le Cam , Amélie Patinote , Laurent Journot , Christelle Reynes , Julien Bobe

Genome editing reveals reproductive and developmental dependencies on specific types of vitellogenin in zebrafish (Danio rerio).

Molecular reproduction and development

Avec: Ozlem Yilmaz , Amélie Patinote , Thaovi Nguyen , Emmanuelle Com , Charles Pineau , Julien Bobe

Evolution after Whole-Genome Duplication: Teleost MicroRNAs.

Molecular biology and evolution

Avec: Thomas Desvignes , Jason Sydes , Jerôme Montfort , Julien Bobe , John H Postlethwait

Tissue origin of circulating microRNAs and their response to nutritional and environmental stress in rainbow trout (Oncorhynchus mykiss).

The Science of the total environment

Avec: Emilie Cardona , Léo Milhade , Angéline Pourtau , Stéphane Panserat , Fréderic Terrier , Anthony Lanuque , Jérôme Roy , Lucie Marandel , Julien Bobe , Sandrine Skiba-Cassy

Identification of the master sex determining gene in Northern pike (Esox lucius) reveals restricted sex chromosome differentiation.

PLoS genetics

Avec: Qiaowei Pan , Romain Feron , Ayaka Yano , René Guyomard , Elodie Jouanno , Estelle Vigouroux , Ming Wen , Jean-Mickaël Busnel , Julien Bobe , Jean-Paul Concordet , Hugues Parrinello , Laurent Journot , Christophe Klopp , Jérôme Lluch , Céline Roques , John Postlethwait , Manfred Schartl , Amaury Herpin , Yann Guiguen

Lighting chaperone-mediated autophagy (CMA) evolution with an ancient LAMP: the existence of a functional CMA activity in fish.

Autophagy

Avec: Amaury Herpin , Laury Lescat , Julien Bobe , Andreas Jenny , Iban Seiliez

Chaperone-Mediated Autophagy in the Light of Evolution: Insight from Fish.

Molecular biology and evolution

Avec: Laury Lescat , Vincent Véron , Brigitte Mourot , Sandrine Péron , Nathalie Chenais , Karine Dias , Natàlia Riera-Heredia , Florian Beaumatin , Karine Pinel , Muriel Priault , Stéphane Panserat , Bénédicte Salin , Yann Guiguen , Julien Bobe , Amaury Herpin , Iban Seiliez

Neurodevelopment vs. the immune system: Complementary contributions of maternally-inherited gene transcripts and proteins to successful embryonic development in fish.

Genomics

Avec: Daniel Żarski , Aurelie Le Cam , Thomas Frohlich , Miwako Kösters , Christophe Klopp , Joanna Nynca , Sławomir Ciesielski , Beata Sarosiek , Katarzyna Dryl , Jerome Montfort , Jarosław Król , Pascal Fontaine , Andrzej Ciereszko , Julien Bobe

Knock out of specific maternal vitellogenins in zebrafish (Danio rerio) evokes vital changes in egg proteomic profiles that resemble the phenotype of poor quality eggs.

BMC genomics

Avec: Ozlem Yilmaz , Amelie Patinote , Emmanuelle Com , Charles Pineau , Julien Bobe

Liquid Chromatography and Tandem Mass Spectrometry in Label-Free Protein Quantification of Zebrafish (Danio rerio) Eggs.

Methods in molecular biology (Clifton, N.J.)

Avec: Ozlem Yilmaz , Emmanuelle Com , Regis Lavigne , Charles Pineau , Julien Bobe

Effect of micro-algae Schizochytrium sp. supplementation in plant diet on reproduction of female rainbow trout (Oncorhynchus mykiss): maternal programming impact of progeny.

Journal of animal science and biotechnology

Avec: Emilie Cardona , Emilien Segret , Yoann Cachelou , Thibaut Vanderesse , Laurence Larroquet , Alexandre Hermann , Anne Surget , Geneviève Corraze , Frederic Cachelou , Julien Bobe , Sandrine Skiba-Cassy

Physical Enrichment Triggers Brain Plasticity and Influences Blood Plasma Circulating miRNA in Rainbow Trout (

Biology

Avec: Emilie Cardona , Valentin Brunet , Elodie Baranek , Léo Milhade , Sandrine Skiba-Cassy , Julien Bobe , Ludovic Calandreau , Jérôme Roy , Violaine Colson

Genome structures resolve the early diversification of teleost fishes.

Science (New York, N.Y.)

Avec: Elise Parey , Alexandra Louis , Jerome Montfort , Olivier Bouchez , Céline Roques , Carole Iampietro , Jerome Lluch , Adrien Castinel , Cécile Donnadieu , Thomas Desvignes , Christabel Floi Bucao , Elodie Jouanno , Ming Wen , Sahar Mejri , Ron Dirks , Hans Jansen , Christiaan Henkel , Wei-Jen Chen , Margot Zahm , Cédric Cabau , Christophe Klopp , Andrew W Thompson , Marc Robinson-Rechavi , Ingo Braasch , Guillaume Lecointre , Julien Bobe , John H Postlethwait , Camille Berthelot , Hugues Roest Crollius , Yann Guiguen

Domestication modulates the expression of genes involved in neurogenesis in high-quality eggs of Sander lucioperca.

Molecular reproduction and development

Avec: Daniel Żarski , Aurelie Le Cam , Joanna Nynca , Christophe Klopp , Sławomir Ciesielski , Beata Sarosiek , Jerome Montfort , Jarosław Król , Pascal Fontaine , Andrzej Ciereszko , Julien Bobe

Domestication is associated with differential expression of pikeperch egg proteins involved in metabolism, immune response and protein folding.

Animal : an international journal of animal bioscience

Avec: J Nynca , D Żarski , J Bobe , A Ciereszko

Exploring the Impact of a Low-Protein High-Carbohydrate Diet in Mature Broodstock of a Glucose-Intolerant Teleost, the Rainbow Trout.

Frontiers in physiology

Avec: Thérèse Callet , Huihua Hu , Laurence Larroquet , Anne Surget , Jingwei Liu , Elisabeth Plagnes-Juan , Patrick Maunas , Nicolas Turonnet , Jan Alexander Mennigen , Julien Bobe , Christine Burel , Geneviève Corraze , Stephane Panserat , Lucie Marandel

Members of the public in the USA, UK, Canada and Australia expressing genetic exceptionalism say they are more willing to donate genomic data.

European journal of human genetics : EJHG

Avec: Anna Middleton , Richard Milne , Heidi Howard , Emilia Niemiec , Lauren Robarts , Christine Critchley , Dianne Nicol , Barbara Prainsack , Jerome Atutornu , Danya F Vears , James Smith , Claire Steed , Paul Bevan , Erick R Scott , Jason Bobe , Peter Goodhand , Erika Kleiderman , Adrian Thorogood , Katherine I Morley , Auteur inconnu

Domestication may affect the maternal mRNA profile in unfertilized eggs, potentially impacting the embryonic development of Eurasian perch (Perca fluviatilis).

PloS one

Avec: Tainá Rocha de Almeida , Maud Alix , Aurélie Le Cam , Christophe Klopp , Jérôme Montfort , Lola Toomey , Yannick Ledoré , Julien Bobe , Dominique Chardard , Bérénice Schaerlinger , Pascal Fontaine

Open Humans: A platform for participant-centered research and personal data exploration.

GigaScience

Avec: Bastian Greshake Tzovaras , Misha Angrist , Kevin Arvai , Mairi Dulaney , Vero Estrada-Galiñanes , Beau Gunderson , Tim Head , Dana Lewis , Oded Nov , Orit Shaer , Athina Tzovara , Jason Bobe , Mad Price Ball

Allelic diversification after transposable element exaptation promoted

Genome research

Avec: Amaury Herpin , Manfred Schartl , Alexandra Depincé , Yann Guiguen , Julien Bobe , Aurélie Hua-Van , Edward S Hayman , Anna Octavera , Goro Yoshizaki , Krista M Nichols , Giles W Goetz , J Adam Luckenbach

FishmiRNA: An Evolutionarily Supported MicroRNA Annotation and Expression Database for Ray-Finned Fishes.

Molecular biology and evolution

Avec: Thomas Desvignes , Philippe Bardou , Jérôme Montfort , Jason Sydes , Cervin Guyomar , Simon George , John H Postlethwait , Julien Bobe

Réseau de co-auteurs

Julien Bobe 21 collaborations

Yann Guiguen 5 collaborations

Christophe Klopp 5 collaborations

Ozlem Yilmaz 4 collaborations

Amaury Herpin 4 collaborations

Jérôme Montfort 3 collaborations

Emmanuelle Com 3 collaborations

Charles Pineau 3 collaborations

Thomas Desvignes 3 collaborations

John H Postlethwait 3 collaborations

Emilie Cardona 3 collaborations

Sandrine Skiba-Cassy 3 collaborations

Jerome Montfort 3 collaborations

Pascal Fontaine 3 collaborations

Aurélie Le Cam 2 collaborations

Amélie Patinote 2 collaborations

Laurent Journot 2 collaborations

Jason Sydes 2 collaborations

Léo Milhade 2 collaborations

Stéphane Panserat 2 collaborations

Jérôme Roy 2 collaborations

Lucie Marandel 2 collaborations

Elodie Jouanno 2 collaborations

Ming Wen 2 collaborations

Céline Roques 2 collaborations

Manfred Schartl 2 collaborations

Laury Lescat 2 collaborations

Iban Seiliez 2 collaborations

Daniel Żarski 2 collaborations

Aurelie Le Cam 2 collaborations

Joanna Nynca 2 collaborations

Sławomir Ciesielski 2 collaborations

Beata Sarosiek 2 collaborations

Jarosław Król 2 collaborations

Andrzej Ciereszko 2 collaborations

Laurence Larroquet 2 collaborations

Anne Surget 2 collaborations

Geneviève Corraze 2 collaborations

Jeremy Pasquier 1 collaboration

Alexis Fostier 1 collaboration

Daniel J B Clarke 1 collaboration

Alison W Rebman 1 collaboration

Allison Bailey 1 collaboration

Megan L Wojciechowicz 1 collaboration

Sherry L Jenkins 1 collaboration

John E Evangelista 1 collaboration

Matteo Danieletto 1 collaboration

Jinshui Fan 1 collaboration

Mark W Eshoo 1 collaboration

Michael R Mosel 1 collaboration

William Robinson 1 collaboration

Nitya Ramadoss 1 collaboration

Mark J Soloski 1 collaboration

John N Aucott 1 collaboration

Avi Ma'ayan 1 collaboration

Tosca A van Gelderen 1 collaboration

José Antonio Álvarez-Dios 1 collaboration

Violette Thermes 1 collaboration

Francesc Piferrer 1 collaboration

Laia Ribas 1 collaboration

Craig V Sullivan 1 collaboration

Birgitta Norberg 1 collaboration

Caroline T Cheung 1 collaboration

Thao-Vi Nguyen 1 collaboration

Christelle Reynes 1 collaboration

Thaovi Nguyen 1 collaboration

Jerôme Montfort 1 collaboration

Angéline Pourtau 1 collaboration

Fréderic Terrier 1 collaboration

Anthony Lanuque 1 collaboration

Qiaowei Pan 1 collaboration

Romain Feron 1 collaboration

Ayaka Yano 1 collaboration

René Guyomard 1 collaboration

Estelle Vigouroux 1 collaboration

Jean-Mickaël Busnel 1 collaboration

Jean-Paul Concordet 1 collaboration

Hugues Parrinello 1 collaboration

Jérôme Lluch 1 collaboration

John Postlethwait 1 collaboration

Andreas Jenny 1 collaboration

Vincent Véron 1 collaboration

Brigitte Mourot 1 collaboration

Sandrine Péron 1 collaboration

Nathalie Chenais 1 collaboration

Karine Dias 1 collaboration

Natàlia Riera-Heredia 1 collaboration

Florian Beaumatin 1 collaboration

Karine Pinel 1 collaboration

Muriel Priault 1 collaboration

Bénédicte Salin 1 collaboration

Thomas Frohlich 1 collaboration

Miwako Kösters 1 collaboration

Katarzyna Dryl 1 collaboration

Amelie Patinote 1 collaboration

Regis Lavigne 1 collaboration

Emilien Segret 1 collaboration

Yoann Cachelou 1 collaboration

Thibaut Vanderesse 1 collaboration

Alexandre Hermann 1 collaboration

Frederic Cachelou 1 collaboration

Valentin Brunet 1 collaboration

Elodie Baranek 1 collaboration

Ludovic Calandreau 1 collaboration

Violaine Colson 1 collaboration

Elise Parey 1 collaboration

Alexandra Louis 1 collaboration

Olivier Bouchez 1 collaboration

Carole Iampietro 1 collaboration

Jerome Lluch 1 collaboration

Adrien Castinel 1 collaboration

Cécile Donnadieu 1 collaboration

Christabel Floi Bucao 1 collaboration

Sahar Mejri 1 collaboration

Ron Dirks 1 collaboration

Hans Jansen 1 collaboration

Christiaan Henkel 1 collaboration

Wei-Jen Chen 1 collaboration

Margot Zahm 1 collaboration

Cédric Cabau 1 collaboration

Andrew W Thompson 1 collaboration

Marc Robinson-Rechavi 1 collaboration

Ingo Braasch 1 collaboration

Guillaume Lecointre 1 collaboration

Camille Berthelot 1 collaboration

Hugues Roest Crollius 1 collaboration

J Nynca 1 collaboration

D Żarski 1 collaboration

J Bobe 1 collaboration

A Ciereszko 1 collaboration

Thérèse Callet 1 collaboration

Huihua Hu 1 collaboration

Jingwei Liu 1 collaboration

Elisabeth Plagnes-Juan 1 collaboration

Patrick Maunas 1 collaboration

Nicolas Turonnet 1 collaboration

Jan Alexander Mennigen 1 collaboration

Christine Burel 1 collaboration

Stephane Panserat 1 collaboration

Anna Middleton 1 collaboration

Richard Milne 1 collaboration

Heidi Howard 1 collaboration

Emilia Niemiec 1 collaboration

Lauren Robarts 1 collaboration

Christine Critchley 1 collaboration

Dianne Nicol 1 collaboration

Barbara Prainsack 1 collaboration

Jerome Atutornu 1 collaboration

Danya F Vears 1 collaboration

James Smith 1 collaboration

Claire Steed 1 collaboration

Paul Bevan 1 collaboration

Erick R Scott 1 collaboration

Peter Goodhand 1 collaboration

Erika Kleiderman 1 collaboration

Adrian Thorogood 1 collaboration

Katherine I Morley 1 collaboration

None None 1 collaboration

Tainá Rocha de Almeida 1 collaboration

Maud Alix 1 collaboration

Lola Toomey 1 collaboration

Yannick Ledoré 1 collaboration

Dominique Chardard 1 collaboration

Bérénice Schaerlinger 1 collaboration

Bastian Greshake Tzovaras 1 collaboration

Misha Angrist 1 collaboration

Kevin Arvai 1 collaboration

Mairi Dulaney 1 collaboration

Vero Estrada-Galiñanes 1 collaboration

Beau Gunderson 1 collaboration

Tim Head 1 collaboration

Dana Lewis 1 collaboration

Oded Nov 1 collaboration

Orit Shaer 1 collaboration

Athina Tzovara 1 collaboration

Mad Price Ball 1 collaboration

Alexandra Depincé 1 collaboration

Aurélie Hua-Van 1 collaboration

Edward S Hayman 1 collaboration

Anna Octavera 1 collaboration

Goro Yoshizaki 1 collaboration

Krista M Nichols 1 collaboration

Giles W Goetz 1 collaboration

J Adam Luckenbach 1 collaboration

Philippe Bardou 1 collaboration

Cervin Guyomar 1 collaboration

Simon George 1 collaboration