Jeroen F J Laros

Affiliations

Leiden University Medical Center, Department of Human Genetics, Einthovenweg 20, 2333 ZC, Leiden, The Netherlands.
Leiden University Medical Center, Department of Clinical Genetics, Einthovenweg 20, 2333 ZC, Leiden, The Netherlands.
Rijksinstituut voor Volksgezondheid en Milieu, Antonie van Leeuwenhoeklaan 9, 3721 MA, Bilthoven, The Netherlands.

Publications (19)

FAIR Genomes metadata schema promoting Next Generation Sequencing data reuse in Dutch healthcare and research.

Scientific data

Avec: K Joeri van der Velde , Gurnoor Singh , Rajaram Kaliyaperumal , XiaoFeng Liao , Sander de Ridder , Susanne Rebers , Hindrik H D Kerstens , Fernanda de Andrade , Jeroen van Reeuwijk , Fini E De Gruyter , Saskia Hiltemann , Maarten Ligtvoet , Marjan M Weiss , Hanneke W M van Deutekom , Anne M L Jansen , Andrew P Stubbs , Lisenka E L M Vissers , Jeroen F J Laros , Esther van Enckevort , Daphne Stemkens , Peter A C 't Hoen , Jeroen A M Beliën , Mariëlle E van Gijn , Morris A Swertz

Long-term wastewater monitoring of SARS-CoV-2 viral loads and variants at the major international passenger hub Amsterdam Schiphol Airport: A valuable addition to COVID-19 surveillance.

The Science of the total environment

Avec: Anne-Merel R van der Drift , Auke Haver , Astrid Kloosterman , Rudolf F H J van der Beek , Erwin Nagelkerke , Dirk Eggink , Jeroen F J Laros , Consortium Nrs , Jaap T van Dissel , Ana Maria de Roda Husman , Willemijn J Lodder

Mutalyzer 2: next generation HGVS nomenclature checker.

Bioinformatics (Oxford, England)

Avec: Mihai Lefter , Jonathan K Vis , Martijn Vermaat , Johan T den Dunnen , Peter E M Taschner , Jeroen F J Laros

Regional reemergence of a SARS-CoV-2 Delta lineage amid an Omicron wave detected by wastewater sequencing.

Scientific reports

Avec: Auke Haver , Rick Theijn , Ivo D Grift , Gino Raaijmakers , Elsa Poorter , Jeroen F J Laros , Jaap T van Dissel , Willemijn J Lodder

Annotating Transcriptional Effects of Genetic Variants in Disease-Relevant Tissue: Transcriptome-Wide Allelic Imbalance in Osteoarthritic Cartilage.

Arthritis & rheumatology (Hoboken, N.J.)

Avec: Wouter den Hollander , Irina Pulyakhina , Cindy Boer , Nils Bomer , Ruud van der Breggen , Wibowo Arindrarto , Rodrigo Couthino de Almeida , Nico Lakenberg , Thom Sentner , Jeroen F J Laros , Peter A C 't Hoen , Eline P E Slagboom , Rob G H H Nelissen , Joyce van Meurs , Yolande F M Ramos , Ingrid Meulenbelt

Adenine base editing of the

Molecular therapy. Nucleic acids

Avec: Darina Šikrová , Vlad A Cadar , Yavuz Ariyurek , Jeroen F J Laros , Judit Balog , Silvère M van der Maarel

Whole genome sequencing and the application of a SNP panel reveal primary evolutionary lineages and genomic variation in the lion (Panthera leo).

BMC genomics

Avec: L D Bertola , M Vermaat , F Lesilau , M Chege , P N Tumenta , E A Sogbohossou , O D Schaap , H Bauer , B D Patterson , P A White , H H de Iongh , J F J Laros , K Vrieling

Metagenomic Surveillance of Viral Gastroenteritis in a Public Health Setting.

Microbiology spectrum

Avec: Dennis Schmitz , Florian Zwagemaker , Bas van der Veer , Harry Vennema , Jeroen F J Laros , Marion P G Koopmans , Miranda De Graaf , Annelies Kroneman

Accessible viral metagenomics for public health and clinical domains with Jovian.

Scientific reports

Avec: Dennis Schmitz , Florian Zwagemaker , Sam Nooij , Thierry K S Janssens , Jeroen Cremer , Robert Verhagen , Harry Vennema , Annelies Kroneman , Marion P G Koopmans , Jeroen F J Laros , Miranda de Graaf

Taxonomic classification and abundance estimation using 16S and WGS-A comparison using controlled reference samples.

Forensic science international. Genetics

Avec: Lusine Khachatryan , Rick H de Leeuw , Margriet E M Kraakman , Nikos Pappas , Marije Te Raa , Hailiang Mei , Peter de Knijff , Jeroen F J Laros

Archival, paleopathological and aDNA-based techniques in leprosy research and the case of Father Petrus Donders at the Leprosarium 'Batavia', Suriname.

International journal of paleopathology

Avec: Jaap T Van Dissel , Toine Pieters , Annemieke Geluk , George Maat , Henk E Menke , Maria Tió-Coma , Eveline Altena , Jeroen F J Laros , Malti R Adhin

Coronavirus discovery by metagenomic sequencing: a tool for pandemic preparedness.

Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology

Avec: Ellen C Carbo , Igor A Sidorov , Jessika C Zevenhoven-Dobbe , Eric J Snijder , Eric C Claas , Jeroen F J Laros , Aloys C M Kroes , Jutte J C de Vries

Fecal Microbiota Transplantation Influences Procarcinogenic Escherichia coli in Recipient Recurrent Clostridioides difficile Patients.

Gastroenterology

Avec: Sam Nooij , Quinten R Ducarmon , Jeroen F J Laros , Romy D Zwittink , Jason M Norman , Wiep Klaas Smits , Hein W Verspaget , Josbert J Keller , Elisabeth M Terveer , Ed J Kuijper , Auteur inconnu

Comprehensive diagnostics of acute myeloid leukemia by whole transcriptome RNA sequencing.

Leukemia

Avec: Wibowo Arindrarto , Daniel M Borràs , Ruben A L de Groen , Redmar R van den Berg , Irene J Locher , Saskia A M E van Diessen , Rosalie van der Holst , Edith D van der Meijden , M Willy Honders , Rick H de Leeuw , Wina Verlaat , Inge Jedema , Wilma G M Kroes , Jeroen Knijnenburg , Tom van Wezel , Joost S P Vermaat , Peter J M Valk , Bart Janssen , Peter de Knijff , Cornelis A M van Bergen , Erik B van den Akker , Peter A C 't Hoen , Szymon M Kiełbasa , Jeroen F J Laros , Marieke Griffioen , Hendrik Veelken

Dutch genome diagnostic laboratories accelerated and improved variant interpretation and increased accuracy by sharing data.

Human mutation

Avec: Ivo F A C Fokkema , Kasper J van der Velde , Mariska K Slofstra , Claudia A L Ruivenkamp , Maartje J Vogel , Rolph Pfundt , Marinus J Blok , Ronald H Lekanne Deprez , Quinten Waisfisz , Kristin M Abbott , Richard J Sinke , Rubayte Rahman , Isaäc J Nijman , Bart de Koning , Gert Thijs , Nienke Wieskamp , Ruben J G Moritz , Bart Charbon , Jasper J Saris , Johan T den Dunnen , Jeroen F J Laros , Morris A Swertz , Marielle E van Gijn

BacTag - a pipeline for fast and accurate gene and allele typing in bacterial sequencing data based on database preprocessing.

BMC genomics

Avec: Lusine Khachatryan , Margriet E M Kraakman , Alexandra T Bernards , Jeroen F J Laros

A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration.

Scientific data

Avec: Friederike Ehrhart , Annika Jacobsen , Maria Rigau , Mattia Bosio , Rajaram Kaliyaperumal , Jeroen F J Laros , Egon L Willighagen , Alfonso Valencia , Marco Roos , Salvador Capella-Gutierrez , Leopold M G Curfs , Chris T Evelo

compareMS2 2.0: An Improved Software for Comparing Tandem Mass Spectrometry Datasets.

Journal of proteome research

Avec: Rob Marissen , Madhushri S Varunjikar , Jeroen F J Laros , Josef D Rasinger , Benjamin A Neely , Magnus Palmblad

A Boolean algebra for genetic variants.

Bioinformatics (Oxford, England)

Avec: Jonathan K Vis , Mark A Santcroos , Walter A Kosters , Jeroen F J Laros

Réseau de co-auteurs

Peter A C 't Hoen 3 collaborations

Rajaram Kaliyaperumal 2 collaborations

Morris A Swertz 2 collaborations

Auke Haver 2 collaborations

Jaap T van Dissel 2 collaborations

Willemijn J Lodder 2 collaborations

Jonathan K Vis 2 collaborations

Johan T den Dunnen 2 collaborations

Wibowo Arindrarto 2 collaborations

Dennis Schmitz 2 collaborations

Florian Zwagemaker 2 collaborations

Harry Vennema 2 collaborations

Marion P G Koopmans 2 collaborations

Annelies Kroneman 2 collaborations

Sam Nooij 2 collaborations

Lusine Khachatryan 2 collaborations

Rick H de Leeuw 2 collaborations

Margriet E M Kraakman 2 collaborations

Peter de Knijff 2 collaborations

K Joeri van der Velde 1 collaboration

Gurnoor Singh 1 collaboration

XiaoFeng Liao 1 collaboration

Sander de Ridder 1 collaboration

Susanne Rebers 1 collaboration

Hindrik H D Kerstens 1 collaboration

Fernanda de Andrade 1 collaboration

Jeroen van Reeuwijk 1 collaboration

Fini E De Gruyter 1 collaboration

Saskia Hiltemann 1 collaboration

Maarten Ligtvoet 1 collaboration

Marjan M Weiss 1 collaboration

Hanneke W M van Deutekom 1 collaboration

Anne M L Jansen 1 collaboration

Andrew P Stubbs 1 collaboration

Lisenka E L M Vissers 1 collaboration

Esther van Enckevort 1 collaboration

Daphne Stemkens 1 collaboration

Jeroen A M Beliën 1 collaboration

Mariëlle E van Gijn 1 collaboration

Anne-Merel R van der Drift 1 collaboration

Astrid Kloosterman 1 collaboration

Rudolf F H J van der Beek 1 collaboration

Erwin Nagelkerke 1 collaboration

Dirk Eggink 1 collaboration

Consortium Nrs 1 collaboration

Ana Maria de Roda Husman 1 collaboration

Mihai Lefter 1 collaboration

Martijn Vermaat 1 collaboration

Peter E M Taschner 1 collaboration

Rick Theijn 1 collaboration

Ivo D Grift 1 collaboration

Gino Raaijmakers 1 collaboration

Elsa Poorter 1 collaboration

Wouter den Hollander 1 collaboration

Irina Pulyakhina 1 collaboration

Cindy Boer 1 collaboration

Nils Bomer 1 collaboration

Ruud van der Breggen 1 collaboration

Rodrigo Couthino de Almeida 1 collaboration

Nico Lakenberg 1 collaboration

Thom Sentner 1 collaboration

Eline P E Slagboom 1 collaboration

Rob G H H Nelissen 1 collaboration

Joyce van Meurs 1 collaboration

Yolande F M Ramos 1 collaboration

Ingrid Meulenbelt 1 collaboration

Darina Šikrová 1 collaboration

Vlad A Cadar 1 collaboration

Yavuz Ariyurek 1 collaboration

Judit Balog 1 collaboration

Silvère M van der Maarel 1 collaboration

L D Bertola 1 collaboration

M Vermaat 1 collaboration

F Lesilau 1 collaboration

M Chege 1 collaboration

P N Tumenta 1 collaboration

E A Sogbohossou 1 collaboration

O D Schaap 1 collaboration

H Bauer 1 collaboration

B D Patterson 1 collaboration

P A White 1 collaboration

H H de Iongh 1 collaboration

J F J Laros 1 collaboration

K Vrieling 1 collaboration

Bas van der Veer 1 collaboration

Miranda De Graaf 1 collaboration

Thierry K S Janssens 1 collaboration

Jeroen Cremer 1 collaboration

Robert Verhagen 1 collaboration

Miranda de Graaf 1 collaboration

Nikos Pappas 1 collaboration

Marije Te Raa 1 collaboration

Hailiang Mei 1 collaboration

Jaap T Van Dissel 1 collaboration

Toine Pieters 1 collaboration

Annemieke Geluk 1 collaboration

George Maat 1 collaboration

Henk E Menke 1 collaboration

Maria Tió-Coma 1 collaboration

Eveline Altena 1 collaboration

Malti R Adhin 1 collaboration

Ellen C Carbo 1 collaboration

Igor A Sidorov 1 collaboration

Jessika C Zevenhoven-Dobbe 1 collaboration

Eric J Snijder 1 collaboration

Eric C Claas 1 collaboration

Aloys C M Kroes 1 collaboration

Jutte J C de Vries 1 collaboration

Quinten R Ducarmon 1 collaboration

Romy D Zwittink 1 collaboration

Jason M Norman 1 collaboration

Wiep Klaas Smits 1 collaboration

Hein W Verspaget 1 collaboration

Josbert J Keller 1 collaboration

Elisabeth M Terveer 1 collaboration

Ed J Kuijper 1 collaboration

None None 1 collaboration

Daniel M Borràs 1 collaboration

Ruben A L de Groen 1 collaboration

Redmar R van den Berg 1 collaboration

Irene J Locher 1 collaboration

Saskia A M E van Diessen 1 collaboration

Rosalie van der Holst 1 collaboration

Edith D van der Meijden 1 collaboration

M Willy Honders 1 collaboration

Wina Verlaat 1 collaboration

Inge Jedema 1 collaboration

Wilma G M Kroes 1 collaboration

Jeroen Knijnenburg 1 collaboration

Tom van Wezel 1 collaboration

Joost S P Vermaat 1 collaboration

Peter J M Valk 1 collaboration

Bart Janssen 1 collaboration

Cornelis A M van Bergen 1 collaboration

Erik B van den Akker 1 collaboration

Szymon M Kiełbasa 1 collaboration

Marieke Griffioen 1 collaboration

Hendrik Veelken 1 collaboration

Ivo F A C Fokkema 1 collaboration

Kasper J van der Velde 1 collaboration

Mariska K Slofstra 1 collaboration

Claudia A L Ruivenkamp 1 collaboration

Maartje J Vogel 1 collaboration

Rolph Pfundt 1 collaboration

Marinus J Blok 1 collaboration

Ronald H Lekanne Deprez 1 collaboration

Quinten Waisfisz 1 collaboration

Kristin M Abbott 1 collaboration

Richard J Sinke 1 collaboration

Rubayte Rahman 1 collaboration

Isaäc J Nijman 1 collaboration

Bart de Koning 1 collaboration

Gert Thijs 1 collaboration

Nienke Wieskamp 1 collaboration

Ruben J G Moritz 1 collaboration

Bart Charbon 1 collaboration

Jasper J Saris 1 collaboration

Marielle E van Gijn 1 collaboration

Alexandra T Bernards 1 collaboration

Friederike Ehrhart 1 collaboration

Annika Jacobsen 1 collaboration

Maria Rigau 1 collaboration

Mattia Bosio 1 collaboration

Egon L Willighagen 1 collaboration

Alfonso Valencia 1 collaboration

Marco Roos 1 collaboration

Salvador Capella-Gutierrez 1 collaboration

Leopold M G Curfs 1 collaboration

Chris T Evelo 1 collaboration

Rob Marissen 1 collaboration

Madhushri S Varunjikar 1 collaboration

Josef D Rasinger 1 collaboration

Benjamin A Neely 1 collaboration

Magnus Palmblad 1 collaboration

Mark A Santcroos 1 collaboration

Walter A Kosters 1 collaboration