Jonathan Crain

Affiliations

Ragon Institute of MGH, Harvard, and MIT, Cambridge, MA 02139, USA.

Publications (22)

Sequenced-based paternity analysis to improve breeding and identify self-incompatibility loci in intermediate wheatgrass (Thinopyrum intermedium).

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Avec: Jared Crain , Steve Larson , Kevin Dorn , Traci Hagedorn , Lee DeHaan , Jesse Poland

Rescheduling hydrocodone combination products: Impact on patients receiving long-term HCP therapy in a large chain pharmacy-A statewide assessment.

Journal of the American Pharmacists Association : JAPhA

Avec: Brian L Winbigler , Michael G O'Neil , Jeremy Crain , A Shaun Rowe , Katherine A Ryan

Membrane Binding of Antimicrobial Peptides Is Modulated by Lipid Charge Modification.

Journal of chemical theory and computation

Avec: Patrick W Simcock , Maike Bublitz , Flaviu Cipcigan , Maxim G Ryadnov , Jason Crain , Phillip J Stansfeld , Mark S P Sansom

Switching Cytolytic Nanopores into Antimicrobial Fractal Ruptures by a Single Side Chain Mutation.

ACS nano

Avec: Katharine Hammond , Flaviu Cipcigan , Kareem Al Nahas , Valeria Losasso , Helen Lewis , Jehangir Cama , Fausto Martelli , Patrick W Simcock , Marcus Fletcher , Jascindra Ravi , Phillip J Stansfeld , Stefano Pagliara , Bart W Hoogenboom , Ulrich F Keyser , Mark S P Sansom , Jason Crain , Maxim G Ryadnov

Development of whole-genome prediction models to increase the rate of genetic gain in intermediate wheatgrass (Thinopyrum intermedium) breeding.

The plant genome

Avec: Jared Crain , Atena Haghighattalab , Lee DeHaan , Jesse Poland

Genetic architecture and QTL selection response for Kernza perennial grain domestication traits.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Avec: Jared Crain , Steve Larson , Kevin Dorn , Lee DeHaan , Jesse Poland

Accelerating drug target inhibitor discovery with a deep generative foundation model.

Science advances

Avec: Vijil Chenthamarakshan , Samuel C Hoffman , C David Owen , Petra Lukacik , Claire Strain-Damerell , Daren Fearon , Tika R Malla , Anthony Tumber , Christopher J Schofield , Helen M E Duyvesteyn , Wanwisa Dejnirattisai , Loic Carrique , Thomas S Walter , Gavin R Screaton , Tetiana Matviiuk , Aleksandra Mojsilovic , Jason Crain , Martin A Walsh , David I Stuart , Payel Das

Nonadiabatic Nuclear-Electron Dynamics: A Quantum Computing Approach.

The journal of physical chemistry letters

Avec: Arseny Kovyrshin , Mårten Skogh , Lars Tornberg , Anders Broo , Stefano Mensa , Emre Sahin , Benjamin C B Symons , Jason Crain , Ivano Tavernelli

Electronic Polarizability Tunes the Function of the Human Bestrophin 1 Cl⁻ Channel.

bioRxiv : the preprint server for biology

Avec: Linda X Phan , Aaron P Owji , Tingting Yang , Jason Crain , Mark S P Sansom , Stephen J Tucker

Influence of electronic polarization on the binding of anions to a chloride-pumping rhodopsin.

Biophysical journal

Avec: Linda X Phan , Victor Cruces Chamorro , Hector Martinez-Seara , Jason Crain , Mark S P Sansom , Stephen J Tucker

The impact of a pharmacist-extender training program to improve pneumococcal vaccination rates within a community chain pharmacy.

Journal of the American Pharmacists Association : JAPhA

Avec: Julia N Percy , Jeremy Crain , Leanne Rein , Kenneth C Hohmeier

Exploring the early phase of implementation of a vaccine-based clinical decision support system in the community pharmacy.

Journal of the American Pharmacists Association : JAPhA

Avec: Kelsey D Frederick , Justin D Gatwood , Daniel R Atchley , Leanne J Rein , Suzan G Ali , Andrea L Brookhart , Jeremy Crain , Tracy M Hagemann , Sujith Ramachandran , Chi-Yang Chiu , Kenneth C Hohmeier

Mapping functional humoral correlates of protection against malaria challenge following RTS,S/AS01 vaccination.

Science translational medicine

Avec: Todd J Suscovich , Jonathan K Fallon , Jishnu Das , Allison R Demas , Jonathan Crain , Caitlyn H Linde , Ashlin Michell , Harini Natarajan , Claudia Arevalo , Thomas Broge , Thomas Linnekin , Viraj Kulkarni , Richard Lu , Matthew D Slein , Corinne Luedemann , Meghan Marquette , Sandra March , Joshua Weiner , Scott Gregory , Margherita Coccia , Yevel Flores-Garcia , Fidel Zavala , Margaret E Ackerman , Elke Bergmann-Leitner , Jenny Hendriks , Jerald Sadoff , Sheetij Dutta , Sangeeta N Bhatia , Douglas A Lauffenburger , Erik Jongert , Ulrike Wille-Reece , Galit Alter

Membrane Permeability in Cyclic Peptides is Modulated by Core Conformations.

Journal of chemical information and modeling

Avec: Flaviu Cipcigan , Paul Smith , Jason Crain , Anders Hogner , Leonardo De Maria , Antonio Llinas , Ekaterina Ratkova

Toward Accurate Post-Born-Oppenheimer Molecular Simulations on Quantum Computers: An Adaptive Variational Eigensolver with Nuclear-Electronic Frozen Natural Orbitals.

Journal of chemical theory and computation

Avec: Anton Nykänen , Aaron Miller , Walter Talarico , Stefan Knecht , Arseny Kovyrshin , Mårten Skogh , Lars Tornberg , Anders Broo , Stefano Mensa , Benjamin C B Symons , Emre Sahin , Jason Crain , Ivano Tavernelli , Fabijan Pavošević

Origin of current intermediate wheatgrass germplasm being developed for Kernza grain production.

Research square

Avec: Peggy Wagoner , Jared Crain , Steve Larson , Lee DeHaan

Statewide Outbreak of Neisseria meningitidis Serogroup Y, Sequence Type 1466 - Virginia, 2022-2024.

MMWR. Morbidity and mortality weekly report

Avec: Meredith Robinson , Jenny Crain , Brittany Kendall , Victoria Alexander , Elena Diskin , Dawn Saady , Corryn Hicks , Angela Myrick-West , Paige Bordwine , Denise Sockwell , Emily Craig , Amy Rubis , Lucy McNamara , Shalabh Sharma , Rebecca Howie , Daya Marasini , Henju Marjuki , Ana Colón

Enhancing Crop Domestication Through Genomic Selection, a Case Study of Intermediate Wheatgrass.

Frontiers in plant science

Avec: Jared Crain , Prabin Bajgain , James Anderson , Xiaofei Zhang , Lee DeHaan , Jesse Poland

Genome mapping of quantitative trait loci (QTL) controlling domestication traits of intermediate wheatgrass (Thinopyrum intermedium).

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Avec: Steve Larson , Lee DeHaan , Jesse Poland , Xiaofei Zhang , Kevin Dorn , Traci Kantarski , James Anderson , Jeremy Schmutz , Jane Grimwood , Jerry Jenkins , Shengqiang Shu , Jared Crain , Matthew Robbins , Kevin Jensen

Improving Wheat Yield Prediction Using Secondary Traits and High-Density Phenotyping Under Heat-Stressed Environments.

Frontiers in plant science

Avec: Mohammad Mokhlesur Rahman , Jared Crain , Atena Haghighattalab , Ravi P Singh , Jesse Poland

Crohn's and Colitis Canada's 2021 Impact of COVID-19 & Inflammatory Bowel Disease in Canada: A Knowledge Translation Strategy.

Journal of the Canadian Association of Gastroenterology

Avec: Gilaad G Kaplan , Joseph W Windsor , Janet Crain , Lisa Barrett , Charles N Bernstein , Alain Bitton , Usha Chauhan , Stephanie Coward , Sharyle Fowler , Jean-Eric Ghia , Deanna L Gibson , Anne M Griffiths , Jennifer L Jones , Reena Khanna , M Ellen Kuenzig , Peter L Lakatos , Kate Lee , David R Mack , John K Marshall , Mina Mawani , Sanjay K Murthy , Remo Panaccione , Cynthia H Seow , Laura E Targownik , Sandra Zelinsky , Eric I Benchimol

Structure adaptation in Omicron SARS-CoV-2/hACE2: Biophysical origins of evolutionary driving forces.

Biophysical journal

Avec: Ya-Wen Hsiao , David J Bray , Tseden Taddese , Guadalupe Jiménez-Serratos , Jason Crain

Réseau de co-auteurs

Jason Crain 9 collaborations

Jared Crain 7 collaborations

Lee DeHaan 6 collaborations

Jesse Poland 6 collaborations

Steve Larson 4 collaborations

Mark S P Sansom 4 collaborations

Kevin Dorn 3 collaborations

Jeremy Crain 3 collaborations

Flaviu Cipcigan 3 collaborations

Patrick W Simcock 2 collaborations

Maxim G Ryadnov 2 collaborations

Phillip J Stansfeld 2 collaborations

Atena Haghighattalab 2 collaborations

Arseny Kovyrshin 2 collaborations

Mårten Skogh 2 collaborations

Lars Tornberg 2 collaborations

Anders Broo 2 collaborations

Stefano Mensa 2 collaborations

Emre Sahin 2 collaborations

Benjamin C B Symons 2 collaborations

Ivano Tavernelli 2 collaborations

Linda X Phan 2 collaborations

Stephen J Tucker 2 collaborations

Kenneth C Hohmeier 2 collaborations

James Anderson 2 collaborations

Xiaofei Zhang 2 collaborations

Traci Hagedorn 1 collaboration

Brian L Winbigler 1 collaboration

Michael G O'Neil 1 collaboration

A Shaun Rowe 1 collaboration

Katherine A Ryan 1 collaboration

Maike Bublitz 1 collaboration

Katharine Hammond 1 collaboration

Kareem Al Nahas 1 collaboration

Valeria Losasso 1 collaboration

Helen Lewis 1 collaboration

Jehangir Cama 1 collaboration

Fausto Martelli 1 collaboration

Marcus Fletcher 1 collaboration

Jascindra Ravi 1 collaboration

Stefano Pagliara 1 collaboration

Bart W Hoogenboom 1 collaboration

Ulrich F Keyser 1 collaboration

Vijil Chenthamarakshan 1 collaboration

Samuel C Hoffman 1 collaboration

C David Owen 1 collaboration

Petra Lukacik 1 collaboration

Claire Strain-Damerell 1 collaboration

Daren Fearon 1 collaboration

Tika R Malla 1 collaboration

Anthony Tumber 1 collaboration

Christopher J Schofield 1 collaboration

Helen M E Duyvesteyn 1 collaboration

Wanwisa Dejnirattisai 1 collaboration

Loic Carrique 1 collaboration

Thomas S Walter 1 collaboration

Gavin R Screaton 1 collaboration

Tetiana Matviiuk 1 collaboration

Aleksandra Mojsilovic 1 collaboration

Martin A Walsh 1 collaboration

David I Stuart 1 collaboration

Payel Das 1 collaboration

Aaron P Owji 1 collaboration

Tingting Yang 1 collaboration

Victor Cruces Chamorro 1 collaboration

Hector Martinez-Seara 1 collaboration

Julia N Percy 1 collaboration

Leanne Rein 1 collaboration

Kelsey D Frederick 1 collaboration

Justin D Gatwood 1 collaboration

Daniel R Atchley 1 collaboration

Leanne J Rein 1 collaboration

Suzan G Ali 1 collaboration

Andrea L Brookhart 1 collaboration

Tracy M Hagemann 1 collaboration

Sujith Ramachandran 1 collaboration

Chi-Yang Chiu 1 collaboration

Todd J Suscovich 1 collaboration

Jonathan K Fallon 1 collaboration

Jishnu Das 1 collaboration

Allison R Demas 1 collaboration

Caitlyn H Linde 1 collaboration

Ashlin Michell 1 collaboration

Harini Natarajan 1 collaboration

Claudia Arevalo 1 collaboration

Thomas Broge 1 collaboration

Thomas Linnekin 1 collaboration

Viraj Kulkarni 1 collaboration

Richard Lu 1 collaboration

Matthew D Slein 1 collaboration

Corinne Luedemann 1 collaboration

Meghan Marquette 1 collaboration

Sandra March 1 collaboration

Joshua Weiner 1 collaboration

Scott Gregory 1 collaboration

Margherita Coccia 1 collaboration

Yevel Flores-Garcia 1 collaboration

Fidel Zavala 1 collaboration

Margaret E Ackerman 1 collaboration

Elke Bergmann-Leitner 1 collaboration

Jenny Hendriks 1 collaboration

Jerald Sadoff 1 collaboration

Sheetij Dutta 1 collaboration

Sangeeta N Bhatia 1 collaboration

Douglas A Lauffenburger 1 collaboration

Erik Jongert 1 collaboration

Ulrike Wille-Reece 1 collaboration

Galit Alter 1 collaboration

Paul Smith 1 collaboration

Anders Hogner 1 collaboration

Leonardo De Maria 1 collaboration

Antonio Llinas 1 collaboration

Ekaterina Ratkova 1 collaboration

Anton Nykänen 1 collaboration

Aaron Miller 1 collaboration

Walter Talarico 1 collaboration

Stefan Knecht 1 collaboration

Fabijan Pavošević 1 collaboration

Peggy Wagoner 1 collaboration

Meredith Robinson 1 collaboration

Jenny Crain 1 collaboration

Brittany Kendall 1 collaboration

Victoria Alexander 1 collaboration

Elena Diskin 1 collaboration

Dawn Saady 1 collaboration

Corryn Hicks 1 collaboration

Angela Myrick-West 1 collaboration

Paige Bordwine 1 collaboration

Denise Sockwell 1 collaboration

Emily Craig 1 collaboration

Amy Rubis 1 collaboration

Lucy McNamara 1 collaboration

Shalabh Sharma 1 collaboration

Rebecca Howie 1 collaboration

Daya Marasini 1 collaboration

Henju Marjuki 1 collaboration

Ana Colón 1 collaboration

Prabin Bajgain 1 collaboration

Traci Kantarski 1 collaboration

Jeremy Schmutz 1 collaboration

Jane Grimwood 1 collaboration

Jerry Jenkins 1 collaboration

Shengqiang Shu 1 collaboration

Matthew Robbins 1 collaboration

Kevin Jensen 1 collaboration

Mohammad Mokhlesur Rahman 1 collaboration

Ravi P Singh 1 collaboration

Gilaad G Kaplan 1 collaboration

Joseph W Windsor 1 collaboration

Janet Crain 1 collaboration

Lisa Barrett 1 collaboration

Charles N Bernstein 1 collaboration

Alain Bitton 1 collaboration

Usha Chauhan 1 collaboration

Stephanie Coward 1 collaboration

Sharyle Fowler 1 collaboration

Jean-Eric Ghia 1 collaboration

Deanna L Gibson 1 collaboration

Anne M Griffiths 1 collaboration

Jennifer L Jones 1 collaboration

Reena Khanna 1 collaboration

M Ellen Kuenzig 1 collaboration

Peter L Lakatos 1 collaboration

Kate Lee 1 collaboration

David R Mack 1 collaboration

John K Marshall 1 collaboration

Mina Mawani 1 collaboration

Sanjay K Murthy 1 collaboration

Remo Panaccione 1 collaboration

Cynthia H Seow 1 collaboration

Laura E Targownik 1 collaboration

Sandra Zelinsky 1 collaboration

Eric I Benchimol 1 collaboration

Ya-Wen Hsiao 1 collaboration

David J Bray 1 collaboration

Tseden Taddese 1 collaboration

Guadalupe Jiménez-Serratos 1 collaboration