Manu Setty

Affiliations

Computational & Systems Biology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY 10065, USA.

Publications (10)

Single-Cell Transcriptomics Reveals Early Emergence of Liver Parenchymal and Non-parenchymal Cell Lineages.

Cell

Avec: Jeremy Lotto , Sibyl Drissler , Rebecca Cullum , Wei Wei , Manu Setty , Erin M Bell , Stéphane C Boutet , Sonja Nowotschin , Ying-Yi Kuo , Vidur Garg , Dana Pe'er , Deanna M Church , Anna-Katerina Hadjantonakis , Pamela A Hoodless

Age-related epithelial defects limit thymic function and regeneration.

Nature immunology

Avec: Anastasia I Kousa , Lorenz Jahn , Kelin Zhao , Angel E Flores , Dante Acenas , Emma Lederer , Kimon V Argyropoulos , Andri L Lemarquis , David Granadier , Kirsten Cooper , Michael D'Andrea , Julie M Sheridan , Jennifer Tsai , Lisa Sikkema , Amina Lazrak , Katherine Nichols , Nichole Lee , Romina Ghale , Florent Malard , Hana Andrlova , Enrico Velardi , Salma Youssef , Marina Burgos da Silva , Melissa Docampo , Roshan Sharma , Linas Mazutis , Verena C Wimmer , Kelly L Rogers , Susan DeWolf , Brianna Gipson , Antonio L C Gomes , Manu Setty , Dana Pe'er , Laura Hale , Nancy R Manley , Daniel H D Gray , Marcel R M van den Brink , Jarrod A Dudakov

Molecular heterogeneity of

bioRxiv : the preprint server for biology

Avec: Maria D Purice , Elgene J A Quitevis , R Sean Manning , Liza J Severs , Nina-Tuyen Tran , Violet Sorrentino , Manu Setty , Aakanksha Singhvi

Regenerative lineages and immune-mediated pruning in lung cancer metastasis.

Nature medicine

Avec: Ashley M Laughney , Jing Hu , Nathaniel R Campbell , Samuel F Bakhoum , Manu Setty , Vincent-Philippe Lavallée , Yubin Xie , Ignas Masilionis , Ambrose J Carr , Sanjay Kottapalli , Viola Allaj , Marissa Mattar , Natasha Rekhtman , Joao B Xavier , Linas Mazutis , John T Poirier , Charles M Rudin , Dana Pe'er , Joan Massagué

Tissue Schematics: A framework to decipher tissue architecture and assembly.

Cell systems

Avec: Manu Setty

Quantifying Cell-State Densities in Single-Cell Phenotypic Landscapes using Mellon.

bioRxiv : the preprint server for biology

Avec: Dominik Otto , Cailin Jordan , Brennan Dury , Christine Dien , Manu Setty

CTLA-4 Haploinsufficiency Presenting as Extensive Enteropathy in a Patient With Very Early Onset Inflammatory Bowel Disease.

JPGN reports

Avec: Ngoc N Tran , Mala Setty , Elaine Cham , Alice Y Chan , Sabina Ali

Defining cellular population dynamics at single-cell resolution during prostate cancer progression.

eLife

Avec: Alexandre A Germanos , Sonali Arora , Ye Zheng , Erica T Goddard , Ilsa M Coleman , Anson T Ku , Scott Wilkinson , Hanbing Song , Nicholas J Brady , Robert A Amezquita , Michael Zager , Annalysa Long , Yu Chi Yang , Jason H Bielas , Raphael Gottardo , David S Rickman , Franklin W Huang , Cyrus M Ghajar , Peter S Nelson , Adam G Sowalsky , Manu Setty , Andrew C Hsieh

Hypomorphic SI genetic variants are associated with childhood chronic loose stools.

PloS one

Avec: Bruno P Chumpitazi , Jeffery Lewis , Derick Cooper , Mauro D'Amato , Joel Lim , Sandeep Gupta , Adrian Miranda , Natalie Terry , Devendra Mehta , Ann Scheimann , Molly O'Gorman , Neelesh Tipnis , Yinka Davies , Joel Friedlander , Heather Smith , Jaya Punati , Julie Khlevner , Mala Setty , Carlo Di Lorenzo

Lineage plasticity in prostate cancer depends on JAK/STAT inflammatory signaling.

Science (New York, N.Y.)

Avec: Joseph M Chan , Samir Zaidi , Jillian R Love , Jimmy L Zhao , Manu Setty , Kristine M Wadosky , Anuradha Gopalan , Zi-Ning Choo , Sitara Persad , Jungmin Choi , Justin LaClair , Kayla E Lawrence , Ojasvi Chaudhary , Tianhao Xu , Ignas Masilionis , Irina Linkov , Shangqian Wang , Cindy Lee , Afsar Barlas , Michael J Morris , Linas Mazutis , Ronan Chaligne , Yu Chen , David W Goodrich , Wouter R Karthaus , Dana Pe'er , Charles L Sawyers

Réseau de co-auteurs

Dana Pe'er 4 collaborations

Linas Mazutis 3 collaborations

Ignas Masilionis 2 collaborations

Mala Setty 2 collaborations

Jeremy Lotto 1 collaboration

Sibyl Drissler 1 collaboration

Rebecca Cullum 1 collaboration

Wei Wei 1 collaboration

Erin M Bell 1 collaboration

Stéphane C Boutet 1 collaboration

Sonja Nowotschin 1 collaboration

Ying-Yi Kuo 1 collaboration

Vidur Garg 1 collaboration

Deanna M Church 1 collaboration

Anna-Katerina Hadjantonakis 1 collaboration

Pamela A Hoodless 1 collaboration

Anastasia I Kousa 1 collaboration

Lorenz Jahn 1 collaboration

Kelin Zhao 1 collaboration

Angel E Flores 1 collaboration

Dante Acenas 1 collaboration

Emma Lederer 1 collaboration

Kimon V Argyropoulos 1 collaboration

Andri L Lemarquis 1 collaboration

David Granadier 1 collaboration

Kirsten Cooper 1 collaboration

Michael D'Andrea 1 collaboration

Julie M Sheridan 1 collaboration

Jennifer Tsai 1 collaboration

Lisa Sikkema 1 collaboration

Amina Lazrak 1 collaboration

Katherine Nichols 1 collaboration

Nichole Lee 1 collaboration

Romina Ghale 1 collaboration

Florent Malard 1 collaboration

Hana Andrlova 1 collaboration

Enrico Velardi 1 collaboration

Salma Youssef 1 collaboration

Marina Burgos da Silva 1 collaboration

Melissa Docampo 1 collaboration

Roshan Sharma 1 collaboration

Verena C Wimmer 1 collaboration

Kelly L Rogers 1 collaboration

Susan DeWolf 1 collaboration

Brianna Gipson 1 collaboration

Antonio L C Gomes 1 collaboration

Laura Hale 1 collaboration

Nancy R Manley 1 collaboration

Daniel H D Gray 1 collaboration

Marcel R M van den Brink 1 collaboration

Jarrod A Dudakov 1 collaboration

Maria D Purice 1 collaboration

Elgene J A Quitevis 1 collaboration

R Sean Manning 1 collaboration

Liza J Severs 1 collaboration

Nina-Tuyen Tran 1 collaboration

Violet Sorrentino 1 collaboration

Aakanksha Singhvi 1 collaboration

Ashley M Laughney 1 collaboration

Jing Hu 1 collaboration

Nathaniel R Campbell 1 collaboration

Samuel F Bakhoum 1 collaboration

Vincent-Philippe Lavallée 1 collaboration

Yubin Xie 1 collaboration

Ambrose J Carr 1 collaboration

Sanjay Kottapalli 1 collaboration

Viola Allaj 1 collaboration

Marissa Mattar 1 collaboration

Natasha Rekhtman 1 collaboration

Joao B Xavier 1 collaboration

John T Poirier 1 collaboration

Charles M Rudin 1 collaboration

Joan Massagué 1 collaboration

Dominik Otto 1 collaboration

Cailin Jordan 1 collaboration

Brennan Dury 1 collaboration

Christine Dien 1 collaboration

Ngoc N Tran 1 collaboration

Elaine Cham 1 collaboration

Alice Y Chan 1 collaboration

Sabina Ali 1 collaboration

Alexandre A Germanos 1 collaboration

Sonali Arora 1 collaboration

Ye Zheng 1 collaboration

Erica T Goddard 1 collaboration

Ilsa M Coleman 1 collaboration

Anson T Ku 1 collaboration

Scott Wilkinson 1 collaboration

Hanbing Song 1 collaboration

Nicholas J Brady 1 collaboration

Robert A Amezquita 1 collaboration

Michael Zager 1 collaboration

Annalysa Long 1 collaboration

Yu Chi Yang 1 collaboration

Jason H Bielas 1 collaboration

Raphael Gottardo 1 collaboration

David S Rickman 1 collaboration

Franklin W Huang 1 collaboration

Cyrus M Ghajar 1 collaboration

Peter S Nelson 1 collaboration

Adam G Sowalsky 1 collaboration

Andrew C Hsieh 1 collaboration

Bruno P Chumpitazi 1 collaboration

Jeffery Lewis 1 collaboration

Derick Cooper 1 collaboration

Mauro D'Amato 1 collaboration

Joel Lim 1 collaboration

Sandeep Gupta 1 collaboration

Adrian Miranda 1 collaboration

Natalie Terry 1 collaboration

Devendra Mehta 1 collaboration

Ann Scheimann 1 collaboration

Molly O'Gorman 1 collaboration

Neelesh Tipnis 1 collaboration

Yinka Davies 1 collaboration

Joel Friedlander 1 collaboration

Heather Smith 1 collaboration

Jaya Punati 1 collaboration

Julie Khlevner 1 collaboration

Carlo Di Lorenzo 1 collaboration

Joseph M Chan 1 collaboration

Samir Zaidi 1 collaboration

Jillian R Love 1 collaboration

Jimmy L Zhao 1 collaboration

Kristine M Wadosky 1 collaboration

Anuradha Gopalan 1 collaboration

Zi-Ning Choo 1 collaboration

Sitara Persad 1 collaboration

Jungmin Choi 1 collaboration

Justin LaClair 1 collaboration

Kayla E Lawrence 1 collaboration

Ojasvi Chaudhary 1 collaboration

Tianhao Xu 1 collaboration

Irina Linkov 1 collaboration

Shangqian Wang 1 collaboration

Cindy Lee 1 collaboration

Afsar Barlas 1 collaboration

Michael J Morris 1 collaboration

Ronan Chaligne 1 collaboration

Yu Chen 1 collaboration

David W Goodrich 1 collaboration

Wouter R Karthaus 1 collaboration

Charles L Sawyers 1 collaboration