Maria Masid

Affiliations

Laboratory of Computational Systems Biotechnology, École Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland.
Ludwig Institute for Cancer Research, Department of Oncology, Lausanne University Hospital (CHUV), University of Lausanne, CH-1011, Lausanne, Switzerland.

ORCID: 0000-0001-6470-5083

Publications (8)

Dynamic partitioning of branched-chain amino acids-derived nitrogen supports renal cancer progression.

Nature communications

Avec: Marco Sciacovelli , Aurelien Dugourd , Lorea Valcarcel Jimenez , Ming Yang , Efterpi Nikitopoulou , Ana S H Costa , Laura Tronci , Veronica Caraffini , Paulo Rodrigues , Christina Schmidt , Dylan Gerard Ryan , Timothy Young , Vincent R Zecchini , Sabrina H Rossi , Charlie Massie , Caroline Lohoff , Maria Masid , Vassily Hatzimanikatis , Christoph Kuppe , Alex Von Kriegsheim , Rafael Kramann , Vincent Gnanapragasam , Anne Y Warren , Grant D Stewart , Ayelet Erez , Sakari Vanharanta , Julio Saez-Rodriguez , Christian Frezza

Analysis of human metabolism by reducing the complexity of the genome-scale models using redHUMAN.

Nature communications

Avec: Maria Masid , Meric Ataman , Vassily Hatzimanikatis

Author Correction: Analysis of human metabolism by reducing the complexity of the genome-scale models using redHUMAN.

Nature communications

Avec: Maria Masid , Meric Ataman , Vassily Hatzimanikatis

Host cell CRISPR genomics and modelling reveal shared metabolic vulnerabilities in the intracellular development of Plasmodium falciparum and related hemoparasites.

Nature communications

Avec: Marina Maurizio , Maria Masid , Kerry Woods , Reto Caldelari , John G Doench , Arunasalam Naguleswaran , Denis Joly , Martín González-Fernández , Jonas Zemp , Mélanie Borteele , Vassily Hatzimanikatis , Volker Heussler , Sven Rottenberg , Philipp Olias

A genome-scale metabolic model of Saccharomyces cerevisiae that integrates expression constraints and reaction thermodynamics.

Nature communications

Avec: Omid Oftadeh , Pierre Salvy , Maria Masid , Maxime Curvat , Ljubisa Miskovic , Vassily Hatzimanikatis

Symbolic kinetic models in python (SKiMpy): intuitive modeling of large-scale biological kinetic models.

Bioinformatics (Oxford, England)

Avec: Daniel R Weilandt , Pierre Salvy , Maria Masid , Georgios Fengos , Robin Denhardt-Erikson , Zhaleh Hosseini , Vassily Hatzimanikatis

Rational strain design with minimal phenotype perturbation.

Nature communications

Avec: Bharath Narayanan , Daniel Weilandt , Maria Masid , Ljubisa Miskovic , Vassily Hatzimanikatis

PGE

Nature

Avec: Matteo Morotti , Alizee J Grimm , Helen Carrasco Hope , Marion Arnaud , Mathieu Desbuisson , Nicolas Rayroux , David Barras , Maria Masid , Baptiste Murgues , Bovannak S Chap , Marco Ongaro , Ioanna A Rota , Catherine Ronet , Aspram Minasyan , Johanna Chiffelle , Sebastian B Lacher , Sara Bobisse , Clément Murgues , Eleonora Ghisoni , Khaoula Ouchen , Ribal Bou Mjahed , Fabrizio Benedetti , Naoill Abdellaoui , Riccardo Turrini , Philippe O Gannon , Khalil Zaman , Patrice Mathevet , Loic Lelievre , Isaac Crespo , Marcus Conrad , Gregory Verdeil , Lana E Kandalaft , Julien Dagher , Jesus Corria-Osorio , Marie-Agnes Doucey , Ping-Chih Ho , Alexandre Harari , Nicola Vannini , Jan P Böttcher , Denarda Dangaj Laniti , George Coukos

Réseau de co-auteurs

Vassily Hatzimanikatis 7 collaborations

Meric Ataman 2 collaborations

Pierre Salvy 2 collaborations

Ljubisa Miskovic 2 collaborations

Marco Sciacovelli 1 collaboration

Aurelien Dugourd 1 collaboration

Lorea Valcarcel Jimenez 1 collaboration

Ming Yang 1 collaboration

Efterpi Nikitopoulou 1 collaboration

Ana S H Costa 1 collaboration

Laura Tronci 1 collaboration

Veronica Caraffini 1 collaboration

Paulo Rodrigues 1 collaboration

Christina Schmidt 1 collaboration

Dylan Gerard Ryan 1 collaboration

Timothy Young 1 collaboration

Vincent R Zecchini 1 collaboration

Sabrina H Rossi 1 collaboration

Charlie Massie 1 collaboration

Caroline Lohoff 1 collaboration

Christoph Kuppe 1 collaboration

Alex Von Kriegsheim 1 collaboration

Rafael Kramann 1 collaboration

Vincent Gnanapragasam 1 collaboration

Anne Y Warren 1 collaboration

Grant D Stewart 1 collaboration

Ayelet Erez 1 collaboration

Sakari Vanharanta 1 collaboration

Julio Saez-Rodriguez 1 collaboration

Christian Frezza 1 collaboration

Marina Maurizio 1 collaboration

Kerry Woods 1 collaboration

Reto Caldelari 1 collaboration

John G Doench 1 collaboration

Arunasalam Naguleswaran 1 collaboration

Denis Joly 1 collaboration

Martín González-Fernández 1 collaboration

Jonas Zemp 1 collaboration

Mélanie Borteele 1 collaboration

Volker Heussler 1 collaboration

Sven Rottenberg 1 collaboration

Philipp Olias 1 collaboration

Omid Oftadeh 1 collaboration

Maxime Curvat 1 collaboration

Daniel R Weilandt 1 collaboration

Georgios Fengos 1 collaboration

Robin Denhardt-Erikson 1 collaboration

Zhaleh Hosseini 1 collaboration

Bharath Narayanan 1 collaboration

Daniel Weilandt 1 collaboration

Matteo Morotti 1 collaboration

Alizee J Grimm 1 collaboration

Helen Carrasco Hope 1 collaboration

Marion Arnaud 1 collaboration

Mathieu Desbuisson 1 collaboration

Nicolas Rayroux 1 collaboration

David Barras 1 collaboration

Baptiste Murgues 1 collaboration

Bovannak S Chap 1 collaboration

Marco Ongaro 1 collaboration

Ioanna A Rota 1 collaboration

Catherine Ronet 1 collaboration

Aspram Minasyan 1 collaboration

Johanna Chiffelle 1 collaboration

Sebastian B Lacher 1 collaboration

Sara Bobisse 1 collaboration

Clément Murgues 1 collaboration

Eleonora Ghisoni 1 collaboration

Khaoula Ouchen 1 collaboration

Ribal Bou Mjahed 1 collaboration

Fabrizio Benedetti 1 collaboration

Naoill Abdellaoui 1 collaboration

Riccardo Turrini 1 collaboration

Philippe O Gannon 1 collaboration

Khalil Zaman 1 collaboration

Patrice Mathevet 1 collaboration

Loic Lelievre 1 collaboration

Isaac Crespo 1 collaboration

Marcus Conrad 1 collaboration

Gregory Verdeil 1 collaboration

Lana E Kandalaft 1 collaboration

Julien Dagher 1 collaboration

Jesus Corria-Osorio 1 collaboration

Marie-Agnes Doucey 1 collaboration

Ping-Chih Ho 1 collaboration

Alexandre Harari 1 collaboration

Nicola Vannini 1 collaboration

Jan P Böttcher 1 collaboration

Denarda Dangaj Laniti 1 collaboration

George Coukos 1 collaboration