Martin C Frith

Affiliations

Artificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology (AIST), 2-3-26 Aomi, Koto-ku, Tokyo, 135-0064, Japan. mcfrith@edu.k.u-tokyo.ac.jp.
Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, Chiba, Japan. mcfrith@edu.k.u-tokyo.ac.jp.
Computational Bio Big-Data Open Innovation Laboratory (CBBD-OIL), AIST, Shinjuku-ku, Tokyo, Japan. mcfrith@edu.k.u-tokyo.ac.jp.

Publications (9)

Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads.

Genome biology

Avec: Satomi Mitsuhashi , Martin C Frith , Takeshi Mizuguchi , Satoko Miyatake , Tomoko Toyota , Hiroaki Adachi , Yoko Oma , Yoshihiro Kino , Hiroaki Mitsuhashi , Naomichi Matsumoto

Significant non-existence of sequences in genomes and proteomes.

Nucleic acids research

Avec: Grigorios Koulouras , Martin C Frith

A simple method for finding related sequences by adding probabilities of alternative alignments.

Genome research

Avec: Martin C Frith

Long-read DNA sequencing fully characterized chromothripsis in a patient with Langer-Giedion syndrome and Cornelia de Lange syndrome-4.

Journal of human genetics

Avec: Ming Lei , Desheng Liang , Yifeng Yang , Satomi Mitsuhashi , Kazutaka Katoh , Noriko Miyake , Martin C Frith , Lingqian Wu , Naomichi Matsumoto

Long-read sequencing identifies the pathogenic nucleotide repeat expansion in RFC1 in a Japanese case of CANVAS.

Journal of human genetics

Avec: Haruko Nakamura , Hiroshi Doi , Satomi Mitsuhashi , Satoko Miyatake , Kazutaka Katoh , Martin C Frith , Tetsuya Asano , Yosuke Kudo , Takuya Ikeda , Shun Kubota , Misako Kunii , Yu Kitazawa , Mikiko Tada , Mitsuo Okamoto , Hideto Joki , Hideyuki Takeuchi , Naomichi Matsumoto , Fumiaki Tanaka

Biallelic structural variations within

Life science alliance

Avec: Sachiko Ohori , Akihiko Miyauchi , Hitoshi Osaka , Charles Marques Lourenco , Naohiro Arakaki , Toru Sengoku , Kazuhiro Ogata , Rachel Sayuri Honjo , Chong Ae Kim , Satomi Mitsuhashi , Martin C Frith , Rie Seyama , Naomi Tsuchida , Yuri Uchiyama , Eriko Koshimizu , Kohei Hamanaka , Kazuharu Misawa , Satoko Miyatake , Takeshi Mizuguchi , Kuniaki Saito , Atsushi Fujita , Naomichi Matsumoto

Finding Rearrangements in Nanopore DNA Reads with LAST and dnarrange.

Methods in molecular biology (Clifton, N.J.)

Avec: Martin C Frith , Satomi Mitsuhashi

Evolution and subfamilies of HERVL human endogenous retrovirus.

Bioinformatics advances

Avec: Huan Zhang , Martin C Frith

NanoPipe-a web server for nanopore MinION sequencing data analysis.

GigaScience

Avec: Victoria Shabardina , Tabea Kischka , Felix Manske , Norbert Grundmann , Martin C Frith , Yutaka Suzuki , Wojciech Makałowski

Réseau de co-auteurs

Satomi Mitsuhashi 5 collaborations

Naomichi Matsumoto 4 collaborations

Satoko Miyatake 3 collaborations

Takeshi Mizuguchi 2 collaborations

Kazutaka Katoh 2 collaborations

Tomoko Toyota 1 collaboration

Hiroaki Adachi 1 collaboration

Yoko Oma 1 collaboration

Yoshihiro Kino 1 collaboration

Hiroaki Mitsuhashi 1 collaboration

Grigorios Koulouras 1 collaboration

Ming Lei 1 collaboration

Desheng Liang 1 collaboration

Yifeng Yang 1 collaboration

Noriko Miyake 1 collaboration

Lingqian Wu 1 collaboration

Haruko Nakamura 1 collaboration

Hiroshi Doi 1 collaboration

Tetsuya Asano 1 collaboration

Yosuke Kudo 1 collaboration

Takuya Ikeda 1 collaboration

Shun Kubota 1 collaboration

Misako Kunii 1 collaboration

Yu Kitazawa 1 collaboration

Mikiko Tada 1 collaboration

Mitsuo Okamoto 1 collaboration

Hideto Joki 1 collaboration

Hideyuki Takeuchi 1 collaboration

Fumiaki Tanaka 1 collaboration

Sachiko Ohori 1 collaboration

Akihiko Miyauchi 1 collaboration

Hitoshi Osaka 1 collaboration

Charles Marques Lourenco 1 collaboration

Naohiro Arakaki 1 collaboration

Toru Sengoku 1 collaboration

Kazuhiro Ogata 1 collaboration

Rachel Sayuri Honjo 1 collaboration

Chong Ae Kim 1 collaboration

Rie Seyama 1 collaboration

Naomi Tsuchida 1 collaboration

Yuri Uchiyama 1 collaboration

Eriko Koshimizu 1 collaboration

Kohei Hamanaka 1 collaboration

Kazuharu Misawa 1 collaboration

Kuniaki Saito 1 collaboration

Atsushi Fujita 1 collaboration

Huan Zhang 1 collaboration

Victoria Shabardina 1 collaboration

Tabea Kischka 1 collaboration

Felix Manske 1 collaboration

Norbert Grundmann 1 collaboration

Yutaka Suzuki 1 collaboration

Wojciech Makałowski 1 collaboration