Matej Lexa

Affiliations

2Faculty of Informatics, Masaryk University, Botanicka 68a, 60200 Brno, Czech Republic.

Publications (18)

Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study.

Mobile DNA

Avec: Pavel Jedlicka , Matej Lexa , Ivan Vanat , Roman Hobza , Eduard Kejnovsky

Bacterial but Not Fungal Gut Microbiota Alterations Are Associated With Common Variable Immunodeficiency (CVID) Phenotype.

Frontiers in immunology

Avec: Kristýna Fiedorová , Matěj Radvanský , Juraj Bosák , Hana Grombiříková , Eva Němcová , Pavlína Králíčková , Michaela Černochová , Iva Kotásková , Matej Lexa , Jiří Litzman , David Šmajs , Tomáš Freiberger

In situ process quality monitoring and defect detection for direct metal laser melting.

Scientific reports

Avec: Sarah Felix , Saikat Ray Majumder , H Kirk Mathews , Michael Lexa , Gabriel Lipsa , Xiaohu Ping , Subhrajit Roychowdhury , Thomas Spears

pqsfinder web: G-quadruplex prediction using optimized pqsfinder algorithm.

Bioinformatics (Oxford, England)

Avec: Dominika Labudová , Jiří Hon , Matej Lexa

Escherichia coli Strains Producing Selected Bacteriocins Inhibit Porcine Enterotoxigenic Escherichia coli (ETEC) under both

Applied and environmental microbiology

Avec: Matěj Hrala , Juraj Bosák , Lenka Micenková , Jitka Křenová , Matej Lexa , Viktória Pirková , Zuzana Tomáštíková , Ivana Koláčková , David Šmajs

HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization.

Bioinformatics (Oxford, England)

Avec: Matej Lexa , Monika Cechova , Son Hoang Nguyen , Pavel Jedlicka , Viktor Tokan , Zdenek Kubat , Roman Hobza , Eduard Kejnovsky

Application errors associated with topical treatment of scabies: an observational study.

Journal der Deutschen Dermatologischen Gesellschaft = Journal of the German Society of Dermatology : JDDG

Avec: Romina Nemecek , Anna Stockbauer , Martina Lexa , Wolfgang Poeppl , Gerhard Mooseder

What Can Long Terminal Repeats Tell Us About the Age of LTR Retrotransposons, Gene Conversion and Ectopic Recombination?

Frontiers in plant science

Avec: Pavel Jedlicka , Matej Lexa , Eduard Kejnovsky

Correction to: Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study.

Mobile DNA

Avec: Pavel Jedlicka , Matej Lexa , Ivan Vanat , Roman Hobza , Eduard Kejnovsky

Patients With Common Variable Immunodeficiency (CVID) Show Higher Gut Bacterial Diversity and Levels of Low-Abundance Genes Than the Healthy Housemates.

Frontiers in immunology

Avec: Juraj Bosák , Matej Lexa , Kristýna Fiedorová , Darshak C Gadara , Lenka Micenková , Zdenek Spacil , Jiří Litzman , Tomáš Freiberger , David Šmajs

Letter to the Editor: Significant mutation enrichment in inverted repeat sites of new SARS-CoV-2 strains.

Briefings in bioinformatics

Avec: Martin Bartas , Pratik Goswami , Matej Lexa , Jiří Červeň , Adriana Volná , Miroslav Fojta , Václav Brázda , Petr Pečinka

SARS-CoV-2 hot-spot mutations are significantly enriched within inverted repeats and CpG island loci.

Briefings in bioinformatics

Avec: Pratik Goswami , Martin Bartas , Matej Lexa , Natália Bohálová , Adriana Volná , Jiří Červeň , Veronika Červeňová , Petr Pečinka , Vladimír Špunda , Miroslav Fojta , Václav Brázda

High-throughput analysis revealed mutations' diverging effects on

RNA biology

Avec: Přemysl Souček , Kamila Réblová , Michal Kramárek , Lenka Radová , Tereza Grymová , Pavla Hujová , Tatiana Kováčová , Matej Lexa , Lucie Grodecká , Tomáš Freiberger

The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery.

Frontiers in microbiology

Avec: Kristýna Fiedorová , Matěj Radvanský , Eva Němcová , Hana Grombiříková , Juraj Bosák , Michaela Černochová , Matej Lexa , David Šmajs , Tomáš Freiberger

Evaluating the Effectiveness of Cellulose-Based Surfactants in Expandable Graphite Wood Coatings.

Polymers

Avec: Tereza Jurczyková , Elena Kmeťová , František Kačík , Martin Lexa , Daniel Dědič

TE-greedy-nester: structure-based detection of LTR retrotransposons and their nesting.

Bioinformatics (Oxford, England)

Avec: Matej Lexa , Pavel Jedlicka , Ivan Vanat , Michal Cervenansky , Eduard Kejnovsky

High-Throughput Spike Detection in Greenhouse Cultivated Grain Crops with Attention Mechanisms-Based Deep Learning Models.

Plant phenomics (Washington, D.C.)

Avec: Sajid Ullah , Klára Panzarová , Martin Trtílek , Matej Lexa , Vojtěch Máčala , Kerstin Neumann , Thomas Altmann , Jan Hejátko , Markéta Pernisová , Evgeny Gladilin

A perspective on genetic and polygenic risk scores-advances and limitations and overview of associated tools.

Briefings in bioinformatics

Avec: Jana Schwarzerova , Martin Hurta , Vojtech Barton , Matej Lexa , Dirk Walther , Valentine Provaznik , Wolfram Weckwerth

Réseau de co-auteurs

Pavel Jedlicka 5 collaborations

Eduard Kejnovsky 5 collaborations

Juraj Bosák 4 collaborations

David Šmajs 4 collaborations

Tomáš Freiberger 4 collaborations

Ivan Vanat 3 collaborations

Roman Hobza 3 collaborations

Kristýna Fiedorová 3 collaborations

Matěj Radvanský 2 collaborations

Hana Grombiříková 2 collaborations

Eva Němcová 2 collaborations

Michaela Černochová 2 collaborations

Jiří Litzman 2 collaborations

Lenka Micenková 2 collaborations

Martin Bartas 2 collaborations

Pratik Goswami 2 collaborations

Jiří Červeň 2 collaborations

Adriana Volná 2 collaborations

Miroslav Fojta 2 collaborations

Václav Brázda 2 collaborations

Petr Pečinka 2 collaborations

Pavlína Králíčková 1 collaboration

Iva Kotásková 1 collaboration

Sarah Felix 1 collaboration

Saikat Ray Majumder 1 collaboration

H Kirk Mathews 1 collaboration

Michael Lexa 1 collaboration

Gabriel Lipsa 1 collaboration

Xiaohu Ping 1 collaboration

Subhrajit Roychowdhury 1 collaboration

Thomas Spears 1 collaboration

Dominika Labudová 1 collaboration

Jiří Hon 1 collaboration

Matěj Hrala 1 collaboration

Jitka Křenová 1 collaboration

Viktória Pirková 1 collaboration

Zuzana Tomáštíková 1 collaboration

Ivana Koláčková 1 collaboration

Monika Cechova 1 collaboration

Son Hoang Nguyen 1 collaboration

Viktor Tokan 1 collaboration

Zdenek Kubat 1 collaboration

Romina Nemecek 1 collaboration

Anna Stockbauer 1 collaboration

Martina Lexa 1 collaboration

Wolfgang Poeppl 1 collaboration

Gerhard Mooseder 1 collaboration

Darshak C Gadara 1 collaboration

Zdenek Spacil 1 collaboration

Natália Bohálová 1 collaboration

Veronika Červeňová 1 collaboration

Vladimír Špunda 1 collaboration

Přemysl Souček 1 collaboration

Kamila Réblová 1 collaboration

Michal Kramárek 1 collaboration

Lenka Radová 1 collaboration

Tereza Grymová 1 collaboration

Pavla Hujová 1 collaboration

Tatiana Kováčová 1 collaboration

Lucie Grodecká 1 collaboration

Tereza Jurczyková 1 collaboration

Elena Kmeťová 1 collaboration

František Kačík 1 collaboration

Martin Lexa 1 collaboration

Daniel Dědič 1 collaboration

Michal Cervenansky 1 collaboration

Sajid Ullah 1 collaboration

Klára Panzarová 1 collaboration

Martin Trtílek 1 collaboration

Vojtěch Máčala 1 collaboration

Kerstin Neumann 1 collaboration

Thomas Altmann 1 collaboration

Jan Hejátko 1 collaboration

Markéta Pernisová 1 collaboration

Evgeny Gladilin 1 collaboration

Jana Schwarzerova 1 collaboration

Martin Hurta 1 collaboration

Vojtech Barton 1 collaboration

Dirk Walther 1 collaboration

Valentine Provaznik 1 collaboration

Wolfram Weckwerth 1 collaboration