Matthias Samwald

Affiliations

Section for Artificial Intelligence and Decision Support, Center for Medical Statistics, Informatics and Intelligent Systems, Medical University of Vienna, Vienna, Austria.

Publications (20)

The roles of predictors in cardiovascular risk models - a question of modeling culture?

BMC medical research methodology

Avec: Christine Wallisch , Asan Agibetov , Daniela Dunkler , Maria Haller , Matthias Samwald , Georg Dorffner , Georg Heinze

Convolutional Neural Networks for Fully Automated Diagnosis of Cardiac Amyloidosis by Cardiac Magnetic Resonance Imaging.

Journal of personalized medicine

Avec: Asan Agibetov , Andreas Kammerlander , Franz Duca , Christian Nitsche , Matthias Koschutnik , Carolina Donà , Theresa-Marie Dachs , René Rettl , Alessa Stria , Lore Schrutka , Christina Binder , Johannes Kastner , Hermine Agis , Renate Kain , Michaela Auer-Grumbach , Matthias Samwald , Christian Hengstenberg , Georg Dorffner , Julia Mascherbauer , Diana Bonderman

Mapping global dynamics of benchmark creation and saturation in artificial intelligence.

Nature communications

Avec: Simon Ott , Adriano Barbosa-Silva , Kathrin Blagec , Jan Brauner , Matthias Samwald

Neural sentence embedding models for semantic similarity estimation in the biomedical domain.

BMC bioinformatics

Avec: Kathrin Blagec , Hong Xu , Asan Agibetov , Matthias Samwald

Machine Learning Enables Prediction of Cardiac Amyloidosis by Routine Laboratory Parameters: A Proof-of-Concept Study.

Journal of clinical medicine

Avec: Asan Agibetov , Benjamin Seirer , Theresa-Marie Dachs , Matthias Koschutnik , Daniel Dalos , René Rettl , Franz Duca , Lore Schrutka , Hermine Agis , Renate Kain , Michela Auer-Grumbach , Christina Binder , Julia Mascherbauer , Christian Hengstenberg , Matthias Samwald , Georg Dorffner , Diana Bonderman

OpenBioLink: a benchmarking framework for large-scale biomedical link prediction.

Bioinformatics (Oxford, England)

Avec: Anna Breit , Simon Ott , Asan Agibetov , Matthias Samwald

ThoughtSource: A central hub for large language model reasoning data.

Scientific data

Avec: Simon Ott , Konstantin Hebenstreit , Valentin Liévin , Christoffer Egeberg Hother , Milad Moradi , Maximilian Mayrhauser , Robert Praas , Ole Winther , Matthias Samwald

Deep contextualized embeddings for quantifying the informative content in biomedical text summarization.

Computer methods and programs in biomedicine

Avec: Milad Moradi , Georg Dorffner , Matthias Samwald

Explaining Black-Box Models for Biomedical Text Classification.

IEEE journal of biomedical and health informatics

Avec: Milad Moradi , Matthias Samwald

Summarization of biomedical articles using domain-specific word embeddings and graph ranking.

Journal of biomedical informatics

Avec: Milad Moradi , Maedeh Dashti , Matthias Samwald

Generating evidence for precision medicine: considerations made by the Ubiquitous Pharmacogenomics Consortium when designing and operationalizing the PREPARE study.

Pharmacogenetics and genomics

Avec: Cathelijne H van der Wouden , Stefan Böhringer , Erika Cecchin , Ka-Chun Cheung , Cristina Lucía Dávila-Fajardo , Vera H M Deneer , Vita Dolžan , Magnus Ingelman-Sundberg , Siv Jönsson , Mats O Karlsson , Marjolein Kriek , Christina Mitropoulou , George P Patrinos , Munir Pirmohamed , Emmanuelle Rial-Sebbag , Matthias Samwald , Matthias Schwab , Daniela Steinberger , Julia Stingl , Gere Sunder-Plassmann , Giuseppe Toffoli , Richard M Turner , Mandy H van Rhenen , Erik van Zwet , Jesse J Swen , Henk-Jan Guchelaar , Auteur inconnu

LinkExplorer: predicting, explaining and exploring links in large biomedical knowledge graphs.

Bioinformatics (Oxford, England)

Avec: Simon Ott , Adriano Barbosa-Silva , Matthias Samwald

A comparison of chain-of-thought reasoning strategies across datasets and models.

PeerJ. Computer science

Avec: Konstantin Hebenstreit , Robert Praas , Louis P Kiesewetter , Matthias Samwald

Pharmacogenomics decision support in the U-PGx project: Results and advice from clinical implementation across seven European countries.

PloS one

Avec: Kathrin Blagec , Jesse J Swen , Rudolf Koopmann , Ka-Chun Cheung , Mandy Crommentuijn-van Rhenen , Inge Holsappel , Lidija Konta , Simon Ott , Daniela Steinberger , Hong Xu , Erika Cecchin , Vita Dolžan , Cristina Lucía Dávila-Fajardo , George P Patrinos , Gere Sunder-Plassmann , Richard M Turner , Munir Pirmohamed , Henk-Jan Guchelaar , Matthias Samwald , Auteur inconnu

A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks.

Scientific data

Avec: Kathrin Blagec , Adriano Barbosa-Silva , Simon Ott , Matthias Samwald

Improving the robustness and accuracy of biomedical language models through adversarial training.

Journal of biomedical informatics

Avec: Milad Moradi , Matthias Samwald

Relational local electroencephalography representations for sleep scoring.

Neural networks : the official journal of the International Neural Network Society

Avec: Georg Brandmayr , Manfred Hartmann , Franz Fürbass , Gerald Matz , Matthias Samwald , Tilmann Kluge , Georg Dorffner

Benchmark datasets driving artificial intelligence development fail to capture the needs of medical professionals.

Journal of biomedical informatics

Avec: Kathrin Blagec , Jakob Kraiger , Wolfgang Frühwirt , Matthias Samwald

A 12-gene pharmacogenetic panel to prevent adverse drug reactions: an open-label, multicentre, controlled, cluster-randomised crossover implementation study.

Lancet (London, England)

Avec: Jesse J Swen , Cathelijne H van der Wouden , Lisanne En Manson , Heshu Abdullah-Koolmees , Kathrin Blagec , Tanja Blagus , Stefan Böhringer , Anne Cambon-Thomsen , Erika Cecchin , Ka-Chun Cheung , Vera Hm Deneer , Mathilde Dupui , Magnus Ingelman-Sundberg , Siv Jonsson , Candace Joefield-Roka , Katja S Just , Mats O Karlsson , Lidija Konta , Rudolf Koopmann , Marjolein Kriek , Thorsten Lehr , Christina Mitropoulou , Emmanuelle Rial-Sebbag , Victoria Rollinson , Rossana Roncato , Matthias Samwald , Elke Schaeffeler , Maria Skokou , Matthias Schwab , Daniela Steinberger , Julia C Stingl , Roman Tremmel , Richard M Turner , Mandy H van Rhenen , Cristina L Dávila Fajardo , Vita Dolžan , George P Patrinos , Munir Pirmohamed , Gere Sunder-Plassmann , Giuseppe Toffoli , Henk-Jan Guchelaar , Auteur inconnu

GPT-4 as a biomedical simulator.

Computers in biology and medicine

Avec: Moritz Schaefer , Stephan Reichl , Rob Ter Horst , Adele M Nicolas , Thomas Krausgruber , Francesco Piras , Peter Stepper , Christoph Bock , Matthias Samwald

Réseau de co-auteurs

Simon Ott 6 collaborations

Kathrin Blagec 6 collaborations

Asan Agibetov 5 collaborations

Georg Dorffner 5 collaborations

Milad Moradi 5 collaborations

Adriano Barbosa-Silva 3 collaborations

Erika Cecchin 3 collaborations

Ka-Chun Cheung 3 collaborations

Vita Dolžan 3 collaborations

George P Patrinos 3 collaborations

Munir Pirmohamed 3 collaborations

Daniela Steinberger 3 collaborations

Gere Sunder-Plassmann 3 collaborations

Richard M Turner 3 collaborations

Jesse J Swen 3 collaborations

Henk-Jan Guchelaar 3 collaborations

None None 3 collaborations

Franz Duca 2 collaborations

Matthias Koschutnik 2 collaborations

Theresa-Marie Dachs 2 collaborations

René Rettl 2 collaborations

Lore Schrutka 2 collaborations

Christina Binder 2 collaborations

Hermine Agis 2 collaborations

Renate Kain 2 collaborations

Christian Hengstenberg 2 collaborations

Julia Mascherbauer 2 collaborations

Diana Bonderman 2 collaborations

Hong Xu 2 collaborations

Konstantin Hebenstreit 2 collaborations

Robert Praas 2 collaborations

Cathelijne H van der Wouden 2 collaborations

Stefan Böhringer 2 collaborations

Cristina Lucía Dávila-Fajardo 2 collaborations

Magnus Ingelman-Sundberg 2 collaborations

Mats O Karlsson 2 collaborations

Marjolein Kriek 2 collaborations

Christina Mitropoulou 2 collaborations

Emmanuelle Rial-Sebbag 2 collaborations

Matthias Schwab 2 collaborations

Giuseppe Toffoli 2 collaborations

Mandy H van Rhenen 2 collaborations

Rudolf Koopmann 2 collaborations

Lidija Konta 2 collaborations

Christine Wallisch 1 collaboration

Daniela Dunkler 1 collaboration

Maria Haller 1 collaboration

Georg Heinze 1 collaboration

Andreas Kammerlander 1 collaboration

Christian Nitsche 1 collaboration

Carolina Donà 1 collaboration

Alessa Stria 1 collaboration

Johannes Kastner 1 collaboration

Michaela Auer-Grumbach 1 collaboration

Jan Brauner 1 collaboration

Benjamin Seirer 1 collaboration

Daniel Dalos 1 collaboration

Michela Auer-Grumbach 1 collaboration

Anna Breit 1 collaboration

Valentin Liévin 1 collaboration

Christoffer Egeberg Hother 1 collaboration

Maximilian Mayrhauser 1 collaboration

Ole Winther 1 collaboration

Maedeh Dashti 1 collaboration

Vera H M Deneer 1 collaboration

Siv Jönsson 1 collaboration

Julia Stingl 1 collaboration

Erik van Zwet 1 collaboration

Louis P Kiesewetter 1 collaboration

Mandy Crommentuijn-van Rhenen 1 collaboration

Inge Holsappel 1 collaboration

Georg Brandmayr 1 collaboration

Manfred Hartmann 1 collaboration

Franz Fürbass 1 collaboration

Gerald Matz 1 collaboration

Tilmann Kluge 1 collaboration

Jakob Kraiger 1 collaboration

Wolfgang Frühwirt 1 collaboration

Lisanne En Manson 1 collaboration

Heshu Abdullah-Koolmees 1 collaboration

Tanja Blagus 1 collaboration

Anne Cambon-Thomsen 1 collaboration

Vera Hm Deneer 1 collaboration

Mathilde Dupui 1 collaboration

Siv Jonsson 1 collaboration

Candace Joefield-Roka 1 collaboration

Katja S Just 1 collaboration

Thorsten Lehr 1 collaboration

Victoria Rollinson 1 collaboration

Rossana Roncato 1 collaboration

Elke Schaeffeler 1 collaboration

Maria Skokou 1 collaboration

Julia C Stingl 1 collaboration

Roman Tremmel 1 collaboration

Cristina L Dávila Fajardo 1 collaboration

Moritz Schaefer 1 collaboration

Stephan Reichl 1 collaboration

Rob Ter Horst 1 collaboration

Adele M Nicolas 1 collaboration

Thomas Krausgruber 1 collaboration

Francesco Piras 1 collaboration

Peter Stepper 1 collaboration

Christoph Bock 1 collaboration