Raphael Leman

Affiliations

Laboratoire de biologie et de génétique du cancer, Département de Biopathologie, Centre François Baclesse, Caen, 14000, France. r.leman@baclesse.unicancer.fr.
Cancer and Brain Genomics, FHU G4 Genomics, Inserm U1245, Normandie University, Rouen, 76183, France. r.leman@baclesse.unicancer.fr.

Publications (9)

COVID-19 Mortality Among American Indian and Alaska Native Persons - 14 States, January-June 2020.

MMWR. Morbidity and mortality weekly report

Avec: Jessica Arrazola , Matthew M Masiello , Sujata Joshi , Adrian E Dominguez , Amy Poel , Crisandra M Wilkie , Jonathan M Bressler , Joseph McLaughlin , Jennifer Kraszewski , Kenneth K Komatsu , Xandy Peterson Pompa , Megan Jespersen , Gillian Richardson , Nicholas Lehnertz , Pamela LeMaster , Britney Rust , Alison Keyser Metobo , Brooke Doman , David Casey , Jessica Kumar , Alyssa L Rowell , Tracy K Miller , Mike Mannell , Ozair Naqvi , Aaron M Wendelboe , Richard Leman , Joshua L Clayton , Bree Barbeau , Samantha K Rice , Samantha JH Rolland , Victoria Warren-Mears , Abigail Echo-Hawk , Andria Apostolou , Michael Landen

SpliceLauncher: a tool for detection, annotation and relative quantification of alternative junctions from RNAseq data.

Bioinformatics (Oxford, England)

Avec: Raphaël Leman , Valentin Harter , Alexandre Atkinson , Grégoire Davy , Antoine Rousselin , Etienne Muller , Laurent Castéra , Fréderic Lemoine , Pierre de la Grange , Marine Guillaud-Bataille , Dominique Vaur , Sophie Krieger

Assessment of branch point prediction tools to predict physiological branch points and their alteration by variants.

BMC genomics

Avec: Raphaël Leman , Hélène Tubeuf , Sabine Raad , Isabelle Tournier , Céline Derambure , Raphaël Lanos , Pascaline Gaildrat , Gaia Castelain , Julie Hauchard , Audrey Killian , Stéphanie Baert-Desurmont , Angelina Legros , Nicolas Goardon , Céline Quesnelle , Agathe Ricou , Laurent Castera , Dominique Vaur , Gérald Le Gac , Chandran Ka , Yann Fichou , Françoise Bonnet-Dorion , Nicolas Sevenet , Marine Guillaud-Bataille , Nadia Boutry-Kryza , Inès Schultz , Virginie Caux-Moncoutier , Maria Rossing , Logan C Walker , Amanda B Spurdle , Claude Houdayer , Alexandra Martins , Sophie Krieger

Fine mapping of RNA isoform diversity using an innovative targeted long-read RNA sequencing protocol with novel dedicated bioinformatics pipeline.

BMC genomics

Avec: Camille Aucouturier , Nicolas Soirat , Laurent Castéra , Denis Bertrand , Alexandre Atkinson , Thibaut Lavolé , Nicolas Goardon , Céline Quesnelle , Julien Levilly , Sosthène Barbachou , Angelina Legros , Olivier Caron , Louise Crivelli , Philippe Denizeau , Pascaline Berthet , Agathe Ricou , Flavie Boulouard , Dominique Vaur , Sophie Krieger , Raphael Leman

SPiP: Splicing Prediction Pipeline, a machine learning tool for massive detection of exonic and intronic variant effects on mRNA splicing.

Human mutation

Avec: Raphaël Leman , Béatrice Parfait , Dominique Vidaud , Emmanuelle Girodon , Laurence Pacot , Gérald Le Gac , Chandran Ka , Claude Ferec , Yann Fichou , Céline Quesnelle , Camille Aucouturier , Etienne Muller , Dominique Vaur , Laurent Castera , Flavie Boulouard , Agathe Ricou , Hélène Tubeuf , Omar Soukarieh , Pascaline Gaildrat , Florence Riant , Marine Guillaud-Bataille , Sandrine M Caputo , Virginie Caux-Moncoutier , Nadia Boutry-Kryza , Françoise Bonnet-Dorion , Ines Schultz , Maria Rossing , Olivier Quenez , Louis Goldenberg , Valentin Harter , Michael T Parsons , Amanda B Spurdle , Thierry Frébourg , Alexandra Martins , Claude Houdayer , Sophie Krieger

Predicting the impact of rare variants on RNA splicing in CAGI6.

Human genetics

Avec: Jenny Lord , Carolina Jaramillo Oquendo , Htoo A Wai , Andrew G L Douglas , David J Bunyan , Yaqiong Wang , Zhiqiang Hu , Zishuo Zeng , Daniel Danis , Panagiotis Katsonis , Amanda Williams , Olivier Lichtarge , Yuchen Chang , Richard D Bagnall , Stephen M Mount , Brynja Matthiasardottir , Chiaofeng Lin , Thomas van Overeem Hansen , Raphael Leman , Alexandra Martins , Claude Houdayer , Sophie Krieger , Constantina Bakolitsa , Yisu Peng , Akash Kamandula , Predrag Radivojac , Diana Baralle

Alternative splicing and ACMG-AMP-2015-based classification of PALB2 genetic variants: an ENIGMA report.

Journal of medical genetics

Avec: Irene Lopez-Perolio , Raphaël Leman , Raquel Behar , Vanessa Lattimore , John F Pearson , Laurent Castéra , Alexandra Martins , Dominique Vaur , Nicolas Goardon , Grégoire Davy , Pilar Garre , Vanesa García-Barberán , Patricia Llovet , Pedro Pérez-Segura , Eduardo Díaz-Rubio , Trinidad Caldés , Kathleen S Hruska , Vickie Hsuan , Sitao Wu , Tina Pesaran , Rachid Karam , Johan Vallon-Christersson , Ake Borg , Auteur inconnu , Alberto Valenzuela-Palomo , Eladio A Velasco , Melissa Southey , Maaike P G Vreeswijk , Peter Devilee , Anders Kvist , Amanda B Spurdle , Logan C Walker , Sophie Krieger , Miguel de la Hoya

First estimate of the scale of canonical 5' splice site GT>GC variants capable of generating wild-type transcripts.

Human mutation

Avec: Jin-Huan Lin , Xin-Ying Tang , Arnaud Boulling , Wen-Bin Zou , Emmanuelle Masson , Yann Fichou , Loann Raud , Marlène Le Tertre , Shun-Jiang Deng , Isabelle Berlivet , Chandran Ka , Matthew Mort , Matthew Hayden , Raphaël Leman , Claude Houdayer , Gerald Le Gac , David N Cooper , Zhao-Shen Li , Claude Férec , Zhuan Liao , Jian-Min Chen

Validation of the Clinical Use of GIScar, an Academic-developed Genomic Instability Score Predicting Sensitivity to Maintenance Olaparib for Ovarian Cancer.

Clinical cancer research : an official journal of the American Association for Cancer Research

Avec: Raphaël Leman , Etienne Muller , Angelina Legros , Nicolas Goardon , Imène Chentli , Alexandre Atkinson , Aurore Tranchant , Laurent Castera , Sophie Krieger , Agathe Ricou , Flavie Boulouard , Florence Joly , Romain Boucly , Aurélie Dumont , Noémie Basset , Florence Coulet , Louise-Marie Chevalier , Etienne Rouleau , Katharina Leitner , Antonio González-Martin , Piera Gargiulo , Hans-Joachim Lück , Catherine Genestie , Auteur inconnu , Isabelle Ray-Coquard , Eric Pujade-Lauraine , Dominique Vaur

Réseau de co-auteurs

Sophie Krieger 7 collaborations

Raphaël Leman 6 collaborations

Dominique Vaur 6 collaborations

Nicolas Goardon 4 collaborations

Agathe Ricou 4 collaborations

Claude Houdayer 4 collaborations

Alexandra Martins 4 collaborations

Alexandre Atkinson 3 collaborations

Etienne Muller 3 collaborations

Laurent Castéra 3 collaborations

Marine Guillaud-Bataille 3 collaborations

Angelina Legros 3 collaborations

Céline Quesnelle 3 collaborations

Laurent Castera 3 collaborations

Chandran Ka 3 collaborations

Yann Fichou 3 collaborations

Amanda B Spurdle 3 collaborations

Flavie Boulouard 3 collaborations

Valentin Harter 2 collaborations

Grégoire Davy 2 collaborations

Hélène Tubeuf 2 collaborations

Pascaline Gaildrat 2 collaborations

Gérald Le Gac 2 collaborations

Françoise Bonnet-Dorion 2 collaborations

Nadia Boutry-Kryza 2 collaborations

Virginie Caux-Moncoutier 2 collaborations

Maria Rossing 2 collaborations

Logan C Walker 2 collaborations

Camille Aucouturier 2 collaborations

None None 2 collaborations

Jessica Arrazola 1 collaboration

Matthew M Masiello 1 collaboration

Sujata Joshi 1 collaboration

Adrian E Dominguez 1 collaboration

Amy Poel 1 collaboration

Crisandra M Wilkie 1 collaboration

Jonathan M Bressler 1 collaboration

Joseph McLaughlin 1 collaboration

Jennifer Kraszewski 1 collaboration

Kenneth K Komatsu 1 collaboration

Xandy Peterson Pompa 1 collaboration

Megan Jespersen 1 collaboration

Gillian Richardson 1 collaboration

Nicholas Lehnertz 1 collaboration

Pamela LeMaster 1 collaboration

Britney Rust 1 collaboration

Alison Keyser Metobo 1 collaboration

Brooke Doman 1 collaboration

David Casey 1 collaboration

Jessica Kumar 1 collaboration

Alyssa L Rowell 1 collaboration

Tracy K Miller 1 collaboration

Mike Mannell 1 collaboration

Ozair Naqvi 1 collaboration

Aaron M Wendelboe 1 collaboration

Richard Leman 1 collaboration

Joshua L Clayton 1 collaboration

Bree Barbeau 1 collaboration

Samantha K Rice 1 collaboration

Samantha JH Rolland 1 collaboration

Victoria Warren-Mears 1 collaboration

Abigail Echo-Hawk 1 collaboration

Andria Apostolou 1 collaboration

Michael Landen 1 collaboration

Antoine Rousselin 1 collaboration

Fréderic Lemoine 1 collaboration

Pierre de la Grange 1 collaboration

Sabine Raad 1 collaboration

Isabelle Tournier 1 collaboration

Céline Derambure 1 collaboration

Raphaël Lanos 1 collaboration

Gaia Castelain 1 collaboration

Julie Hauchard 1 collaboration

Audrey Killian 1 collaboration

Stéphanie Baert-Desurmont 1 collaboration

Nicolas Sevenet 1 collaboration

Inès Schultz 1 collaboration

Nicolas Soirat 1 collaboration

Denis Bertrand 1 collaboration

Thibaut Lavolé 1 collaboration

Julien Levilly 1 collaboration

Sosthène Barbachou 1 collaboration

Olivier Caron 1 collaboration

Louise Crivelli 1 collaboration

Philippe Denizeau 1 collaboration

Pascaline Berthet 1 collaboration

Béatrice Parfait 1 collaboration

Dominique Vidaud 1 collaboration

Emmanuelle Girodon 1 collaboration

Laurence Pacot 1 collaboration

Claude Ferec 1 collaboration

Omar Soukarieh 1 collaboration

Florence Riant 1 collaboration

Sandrine M Caputo 1 collaboration

Ines Schultz 1 collaboration

Olivier Quenez 1 collaboration

Louis Goldenberg 1 collaboration

Michael T Parsons 1 collaboration

Thierry Frébourg 1 collaboration

Jenny Lord 1 collaboration

Carolina Jaramillo Oquendo 1 collaboration

Htoo A Wai 1 collaboration

Andrew G L Douglas 1 collaboration

David J Bunyan 1 collaboration

Yaqiong Wang 1 collaboration

Zhiqiang Hu 1 collaboration

Zishuo Zeng 1 collaboration

Daniel Danis 1 collaboration

Panagiotis Katsonis 1 collaboration

Amanda Williams 1 collaboration

Olivier Lichtarge 1 collaboration

Yuchen Chang 1 collaboration

Richard D Bagnall 1 collaboration

Stephen M Mount 1 collaboration

Brynja Matthiasardottir 1 collaboration

Chiaofeng Lin 1 collaboration

Thomas van Overeem Hansen 1 collaboration

Constantina Bakolitsa 1 collaboration

Yisu Peng 1 collaboration

Akash Kamandula 1 collaboration

Predrag Radivojac 1 collaboration

Diana Baralle 1 collaboration

Irene Lopez-Perolio 1 collaboration

Raquel Behar 1 collaboration

Vanessa Lattimore 1 collaboration

John F Pearson 1 collaboration

Pilar Garre 1 collaboration

Vanesa García-Barberán 1 collaboration

Patricia Llovet 1 collaboration

Pedro Pérez-Segura 1 collaboration

Eduardo Díaz-Rubio 1 collaboration

Trinidad Caldés 1 collaboration

Kathleen S Hruska 1 collaboration

Vickie Hsuan 1 collaboration

Sitao Wu 1 collaboration

Tina Pesaran 1 collaboration

Rachid Karam 1 collaboration

Johan Vallon-Christersson 1 collaboration

Ake Borg 1 collaboration

Alberto Valenzuela-Palomo 1 collaboration

Eladio A Velasco 1 collaboration

Melissa Southey 1 collaboration

Maaike P G Vreeswijk 1 collaboration

Peter Devilee 1 collaboration

Anders Kvist 1 collaboration

Miguel de la Hoya 1 collaboration

Jin-Huan Lin 1 collaboration

Xin-Ying Tang 1 collaboration

Arnaud Boulling 1 collaboration

Wen-Bin Zou 1 collaboration

Emmanuelle Masson 1 collaboration

Loann Raud 1 collaboration

Marlène Le Tertre 1 collaboration

Shun-Jiang Deng 1 collaboration

Isabelle Berlivet 1 collaboration

Matthew Mort 1 collaboration

Matthew Hayden 1 collaboration

Gerald Le Gac 1 collaboration

David N Cooper 1 collaboration

Zhao-Shen Li 1 collaboration

Claude Férec 1 collaboration

Zhuan Liao 1 collaboration

Jian-Min Chen 1 collaboration

Imène Chentli 1 collaboration

Aurore Tranchant 1 collaboration

Florence Joly 1 collaboration

Romain Boucly 1 collaboration

Aurélie Dumont 1 collaboration

Noémie Basset 1 collaboration

Florence Coulet 1 collaboration

Louise-Marie Chevalier 1 collaboration

Etienne Rouleau 1 collaboration

Katharina Leitner 1 collaboration

Antonio González-Martin 1 collaboration

Piera Gargiulo 1 collaboration

Hans-Joachim Lück 1 collaboration

Catherine Genestie 1 collaboration

Isabelle Ray-Coquard 1 collaboration

Eric Pujade-Lauraine 1 collaboration