Accueil
Samir Lababidi
Samir Lababidi
Affiliations
Office of Health Informatics, Office of the Commissioner, FDA, Silver Spring, MD, USA.
Publications (10)
Author Correction: Best practices for benchmarking germline small-variant calls in human genomes.
Nature biotechnology
Avec:
Peter Krusche
,
Len Trigg
,
Paul C Boutros
,
Christopher E Mason
,
Francisco M De La Vega
,
Benjamin L Moore
,
Mar Gonzalez-Porta
,
Michael A Eberle
,
Zivana Tezak
,
Samir Lababidi
,
Rebecca Truty
,
George Asimenos
,
Birgit Funke
,
Mark Fleharty
,
Brad A Chapman
,
Marc Salit
,
Justin M Zook
,
Auteur inconnu
A targeted simulation-extrapolation method for evaluating biomarkers based on new technologies in precision medicine.
Pharmaceutical statistics
Avec:
Dong Wang
,
Sue-Jane Wang
,
Joshua Xu
,
Samir Lababidi
The association between smoking status and post-operative complications in pelvic organ prolapse corrective surgeries.
International urogynecology journal
Avec:
Suzanne Lababidi
,
Brooke Andrews
,
Amina Igeh
,
Gerardo Heredia Melero
Extend the benchmarking indel set by manual review using the individual cell line sequencing data from the Sequencing Quality Control 2 (SEQC2) project.
Scientific reports
Avec:
Binsheng Gong
,
Dan Li
,
Yifan Zhang
,
Rebecca Kusko
,
Samir Lababidi
,
Zehui Cao
,
Mingyang Chen
,
Ning Chen
,
Qiaochu Chen
,
Qingwang Chen
,
Jiacheng Dai
,
Qiang Gan
,
Yuechen Gao
,
Mingkun Guo
,
Gunjan Hariani
,
Yujie He
,
Wanwan Hou
,
He Jiang
,
Garima Kushwaha
,
Jian-Liang Li
,
Jianying Li
,
Yulan Li
,
Liang-Chun Liu
,
Ruimei Liu
,
Shiming Liu
,
Edwin Meriaux
,
Mengqing Mo
,
Mathew Moore
,
Tyler J Moss
,
Quanne Niu
,
Ananddeep Patel
,
Luyao Ren
,
Nedda F Saremi
,
Erfei Shang
,
Jun Shang
,
Ping Song
,
Siqi Sun
,
Brent J Urban
,
Danke Wang
,
Shangzi Wang
,
Zhining Wen
,
Xiangyi Xiong
,
Jingcheng Yang
,
Lihui Yin
,
Chao Zhang
,
Ruolan Zhang
,
Ambica Bhandari
,
Wanshi Cai
,
Agda Karina Eterovic
,
Dalila B Megherbi
,
Tieliu Shi
,
Chen Suo
,
Ying Yu
,
Yuanting Zheng
,
Natalia Novoradovskaya
,
Renee L Sears
,
Leming Shi
,
Wendell Jones
,
Weida Tong
,
Joshua Xu
Assessing reproducibility of inherited variants detected with short-read whole genome sequencing.
Genome biology
Avec:
Bohu Pan
,
Luyao Ren
,
Vitor Onuchic
,
Meijian Guan
,
Rebecca Kusko
,
Steve Bruinsma
,
Len Trigg
,
Andreas Scherer
,
Baitang Ning
,
Chaoyang Zhang
,
Christine Glidewell-Kenney
,
Chunlin Xiao
,
Eric Donaldson
,
Fritz J Sedlazeck
,
Gary Schroth
,
Gokhan Yavas
,
Haiying Grunenwald
,
Haodong Chen
,
Heather Meinholz
,
Joe Meehan
,
Jing Wang
,
Jingcheng Yang
,
Jonathan Foox
,
Jun Shang
,
Kelci Miclaus
,
Lianhua Dong
,
Leming Shi
,
Marghoob Mohiyuddin
,
Mehdi Pirooznia
,
Ping Gong
,
Rooz Golshani
,
Russ Wolfinger
,
Samir Lababidi
,
Sayed Mohammad Ebrahim Sahraeian
,
Steve Sherry
,
Tao Han
,
Tao Chen
,
Tieliu Shi
,
Wanwan Hou
,
Weigong Ge
,
Wen Zou
,
Wenjing Guo
,
Wenjun Bao
,
Wenzhong Xiao
,
Xiaohui Fan
,
Yoichi Gondo
,
Ying Yu
,
Yongmei Zhao
,
Zhenqiang Su
,
Zhichao Liu
,
Weida Tong
,
Wenming Xiao
,
Justin M Zook
,
Yuanting Zheng
,
Huixiao Hong
Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing.
Nature biotechnology
Avec:
Wenming Xiao
,
Luyao Ren
,
Zhong Chen
,
Li Tai Fang
,
Yongmei Zhao
,
Justin Lack
,
Meijian Guan
,
Bin Zhu
,
Erich Jaeger
,
Liz Kerrigan
,
Thomas M Blomquist
,
Tiffany Hung
,
Marc Sultan
,
Kenneth Idler
,
Charles Lu
,
Andreas Scherer
,
Rebecca Kusko
,
Malcolm Moos
,
Chunlin Xiao
,
Stephen T Sherry
,
Ogan D Abaan
,
Wanqiu Chen
,
Xin Chen
,
Jessica Nordlund
,
Ulrika Liljedahl
,
Roberta Maestro
,
Maurizio Polano
,
Jiri Drabek
,
Petr Vojta
,
Sulev Kõks
,
Ene Reimann
,
Bindu Swapna Madala
,
Timothy Mercer
,
Chris Miller
,
Howard Jacob
,
Tiffany Truong
,
Ali Moshrefi
,
Aparna Natarajan
,
Ana Granat
,
Gary P Schroth
,
Rasika Kalamegham
,
Eric Peters
,
Virginie Petitjean
,
Ashley Walton
,
Tsai-Wei Shen
,
Keyur Talsania
,
Cristobal Juan Vera
,
Kurt Langenbach
,
Maryellen de Mars
,
Jennifer A Hipp
,
James C Willey
,
Jing Wang
,
Jyoti Shetty
,
Yuliya Kriga
,
Arati Raziuddin
,
Bao Tran
,
Yuanting Zheng
,
Ying Yu
,
Margaret Cam
,
Parthav Jailwala
,
Cu Nguyen
,
Daoud Meerzaman
,
Qingrong Chen
,
Chunhua Yan
,
Ben Ernest
,
Urvashi Mehra
,
Roderick V Jensen
,
Wendell Jones
,
Jian-Liang Li
,
Brian N Papas
,
Mehdi Pirooznia
,
Yun-Ching Chen
,
Fayaz Seifuddin
,
Zhipan Li
,
Xuelu Liu
,
Wolfgang Resch
,
Jingya Wang
,
Leihong Wu
,
Gokhan Yavas
,
Corey Miles
,
Baitang Ning
,
Weida Tong
,
Christopher E Mason
,
Eric Donaldson
,
Samir Lababidi
,
Louis M Staudt
,
Zivana Tezak
,
Huixiao Hong
,
Charles Wang
,
Leming Shi
US FDA public meeting: identification of concepts and terminology for multicomponent biomarkers.
Biomarkers in medicine
Avec:
Abena S Agyeman
,
Abbas Bandukwala
,
Khaled Bouri
,
Jessica Hawes
,
Daniel M Krainak
,
Samir Lababidi
,
William B Mattes
,
Elena V Mishina
,
Phillip Turfle
,
Sue-Jane Wang
,
Theresa Thekkudan
Best practices for benchmarking germline small-variant calls in human genomes.
Nature biotechnology
Avec:
Peter Krusche
,
Len Trigg
,
Paul C Boutros
,
Christopher E Mason
,
Francisco M De La Vega
,
Benjamin L Moore
,
Mar Gonzalez-Porta
,
Michael A Eberle
,
Zivana Tezak
,
Samir Lababidi
,
Rebecca Truty
,
George Asimenos
,
Birgit Funke
,
Mark Fleharty
,
Brad A Chapman
,
Marc Salit
,
Justin M Zook
,
Auteur inconnu
The impact of misclassification errors on the performance of biomarkers based on next-generation sequencing, a simulation study.
Journal of biopharmaceutical statistics
Avec:
Dong Wang
,
Sue-Jane Wang
,
Samir Lababidi
Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA.
Scientific reports
Avec:
Binsheng Gong
,
Samir Lababidi
,
Rebecca Kusko
,
Khaled Bouri
,
Sarah Prezek
,
Vishal Thovarai
,
Anish Prasanna
,
Ezekiel J Maier
,
Mahdi Golkaram
,
Xingqiang Sun
,
Konstantinos Kyriakidis
,
João Paulo Kitajima
,
Sayed Mohammad Ebrahim Sahraeian
,
Yunfei Guo
,
Elaine Johanson
,
Wendell Jones
,
Weida Tong
,
Joshua Xu
Réseau de co-auteurs
Rebecca Kusko
4 collaborations
Weida Tong
4 collaborations
Len Trigg
3 collaborations
Christopher E Mason
3 collaborations
Zivana Tezak
3 collaborations
Justin M Zook
3 collaborations
Sue-Jane Wang
3 collaborations
Joshua Xu
3 collaborations
Luyao Ren
3 collaborations
Ying Yu
3 collaborations
Yuanting Zheng
3 collaborations
Leming Shi
3 collaborations
Wendell Jones
3 collaborations
Peter Krusche
2 collaborations
Paul C Boutros
2 collaborations
Francisco M De La Vega
2 collaborations
Benjamin L Moore
2 collaborations
Mar Gonzalez-Porta
2 collaborations
Michael A Eberle
2 collaborations
Rebecca Truty
2 collaborations
George Asimenos
2 collaborations
Birgit Funke
2 collaborations
Mark Fleharty
2 collaborations
Brad A Chapman
2 collaborations
Marc Salit
2 collaborations
None None
2 collaborations
Dong Wang
2 collaborations
Binsheng Gong
2 collaborations
Wanwan Hou
2 collaborations
Jian-Liang Li
2 collaborations
Jun Shang
2 collaborations
Jingcheng Yang
2 collaborations
Tieliu Shi
2 collaborations
Meijian Guan
2 collaborations
Andreas Scherer
2 collaborations
Baitang Ning
2 collaborations
Chunlin Xiao
2 collaborations
Eric Donaldson
2 collaborations
Gokhan Yavas
2 collaborations
Jing Wang
2 collaborations
Mehdi Pirooznia
2 collaborations
Sayed Mohammad Ebrahim Sahraeian
2 collaborations
Yongmei Zhao
2 collaborations
Wenming Xiao
2 collaborations
Huixiao Hong
2 collaborations
Khaled Bouri
2 collaborations
Suzanne Lababidi
1 collaboration
Brooke Andrews
1 collaboration
Amina Igeh
1 collaboration
Gerardo Heredia Melero
1 collaboration
Dan Li
1 collaboration
Yifan Zhang
1 collaboration
Zehui Cao
1 collaboration
Mingyang Chen
1 collaboration
Ning Chen
1 collaboration
Qiaochu Chen
1 collaboration
Qingwang Chen
1 collaboration
Jiacheng Dai
1 collaboration
Qiang Gan
1 collaboration
Yuechen Gao
1 collaboration
Mingkun Guo
1 collaboration
Gunjan Hariani
1 collaboration
Yujie He
1 collaboration
He Jiang
1 collaboration
Garima Kushwaha
1 collaboration
Jianying Li
1 collaboration
Yulan Li
1 collaboration
Liang-Chun Liu
1 collaboration
Ruimei Liu
1 collaboration
Shiming Liu
1 collaboration
Edwin Meriaux
1 collaboration
Mengqing Mo
1 collaboration
Mathew Moore
1 collaboration
Tyler J Moss
1 collaboration
Quanne Niu
1 collaboration
Ananddeep Patel
1 collaboration
Nedda F Saremi
1 collaboration
Erfei Shang
1 collaboration
Ping Song
1 collaboration
Siqi Sun
1 collaboration
Brent J Urban
1 collaboration
Danke Wang
1 collaboration
Shangzi Wang
1 collaboration
Zhining Wen
1 collaboration
Xiangyi Xiong
1 collaboration
Lihui Yin
1 collaboration
Chao Zhang
1 collaboration
Ruolan Zhang
1 collaboration
Ambica Bhandari
1 collaboration
Wanshi Cai
1 collaboration
Agda Karina Eterovic
1 collaboration
Dalila B Megherbi
1 collaboration
Chen Suo
1 collaboration
Natalia Novoradovskaya
1 collaboration
Renee L Sears
1 collaboration
Bohu Pan
1 collaboration
Vitor Onuchic
1 collaboration
Steve Bruinsma
1 collaboration
Chaoyang Zhang
1 collaboration
Christine Glidewell-Kenney
1 collaboration
Fritz J Sedlazeck
1 collaboration
Gary Schroth
1 collaboration
Haiying Grunenwald
1 collaboration
Haodong Chen
1 collaboration
Heather Meinholz
1 collaboration
Joe Meehan
1 collaboration
Jonathan Foox
1 collaboration
Kelci Miclaus
1 collaboration
Lianhua Dong
1 collaboration
Marghoob Mohiyuddin
1 collaboration
Ping Gong
1 collaboration
Rooz Golshani
1 collaboration
Russ Wolfinger
1 collaboration
Steve Sherry
1 collaboration
Tao Han
1 collaboration
Tao Chen
1 collaboration
Weigong Ge
1 collaboration
Wen Zou
1 collaboration
Wenjing Guo
1 collaboration
Wenjun Bao
1 collaboration
Wenzhong Xiao
1 collaboration
Xiaohui Fan
1 collaboration
Yoichi Gondo
1 collaboration
Zhenqiang Su
1 collaboration
Zhichao Liu
1 collaboration
Zhong Chen
1 collaboration
Li Tai Fang
1 collaboration
Justin Lack
1 collaboration
Bin Zhu
1 collaboration
Erich Jaeger
1 collaboration
Liz Kerrigan
1 collaboration
Thomas M Blomquist
1 collaboration
Tiffany Hung
1 collaboration
Marc Sultan
1 collaboration
Kenneth Idler
1 collaboration
Charles Lu
1 collaboration
Malcolm Moos
1 collaboration
Stephen T Sherry
1 collaboration
Ogan D Abaan
1 collaboration
Wanqiu Chen
1 collaboration
Xin Chen
1 collaboration
Jessica Nordlund
1 collaboration
Ulrika Liljedahl
1 collaboration
Roberta Maestro
1 collaboration
Maurizio Polano
1 collaboration
Jiri Drabek
1 collaboration
Petr Vojta
1 collaboration
Sulev Kõks
1 collaboration
Ene Reimann
1 collaboration
Bindu Swapna Madala
1 collaboration
Timothy Mercer
1 collaboration
Chris Miller
1 collaboration
Howard Jacob
1 collaboration
Tiffany Truong
1 collaboration
Ali Moshrefi
1 collaboration
Aparna Natarajan
1 collaboration
Ana Granat
1 collaboration
Gary P Schroth
1 collaboration
Rasika Kalamegham
1 collaboration
Eric Peters
1 collaboration
Virginie Petitjean
1 collaboration
Ashley Walton
1 collaboration
Tsai-Wei Shen
1 collaboration
Keyur Talsania
1 collaboration
Cristobal Juan Vera
1 collaboration
Kurt Langenbach
1 collaboration
Maryellen de Mars
1 collaboration
Jennifer A Hipp
1 collaboration
James C Willey
1 collaboration
Jyoti Shetty
1 collaboration
Yuliya Kriga
1 collaboration
Arati Raziuddin
1 collaboration
Bao Tran
1 collaboration
Margaret Cam
1 collaboration
Parthav Jailwala
1 collaboration
Cu Nguyen
1 collaboration
Daoud Meerzaman
1 collaboration
Qingrong Chen
1 collaboration
Chunhua Yan
1 collaboration
Ben Ernest
1 collaboration
Urvashi Mehra
1 collaboration
Roderick V Jensen
1 collaboration
Brian N Papas
1 collaboration
Yun-Ching Chen
1 collaboration
Fayaz Seifuddin
1 collaboration
Zhipan Li
1 collaboration
Xuelu Liu
1 collaboration
Wolfgang Resch
1 collaboration
Jingya Wang
1 collaboration
Leihong Wu
1 collaboration
Corey Miles
1 collaboration
Louis M Staudt
1 collaboration
Charles Wang
1 collaboration
Abena S Agyeman
1 collaboration
Abbas Bandukwala
1 collaboration
Jessica Hawes
1 collaboration
Daniel M Krainak
1 collaboration
William B Mattes
1 collaboration
Elena V Mishina
1 collaboration
Phillip Turfle
1 collaboration
Theresa Thekkudan
1 collaboration
Sarah Prezek
1 collaboration
Vishal Thovarai
1 collaboration
Anish Prasanna
1 collaboration
Ezekiel J Maier
1 collaboration
Mahdi Golkaram
1 collaboration
Xingqiang Sun
1 collaboration
Konstantinos Kyriakidis
1 collaboration
João Paulo Kitajima
1 collaboration
Yunfei Guo
1 collaboration
Elaine Johanson
1 collaboration