Thom Cuddihy

Affiliations

The University of Queensland, Faculty of Medicine, UQ Centre for Clinical Research, Herston, Queensland, Australia.

Publications (10)

Melioidosis Queensland: An analysis of clinical outcomes and genomic factors.

PLoS neglected tropical diseases

Avec: Ian Gassiep , Delaney Burnard , Budi Permana , Michelle J Bauer , Thom Cuddihy , Brian M Forde , Mark D Chatfield , Weiping Ling , Robert Norton , Patrick N A Harris

Determinants of Zika virus host tropism uncovered by deep mutational scanning.

Nature microbiology

Avec: Yin Xiang Setoh , Alberto A Amarilla , Nias Y G Peng , Rebecca E Griffiths , Julio Carrera , Morgan E Freney , Eri Nakayama , Shinya Ogawa , Daniel Watterson , Naphak Modhiran , Faith Elizabeth Nanyonga , Francisco J Torres , Andrii Slonchak , Parthiban Periasamy , Natalie A Prow , Bing Tang , Jessica Harrison , Jody Hobson-Peters , Thom Cuddihy , Justin Cooper-White , Roy A Hall , Paul R Young , Jason M Mackenzie , Ernst Wolvetang , Jesse D Bloom , Andreas Suhrbier , Alexander A Khromykh

Using genomics to understand inter- and intra- outbreak diversity of

Microbial genomics

Avec: Lida Omaleki , Patrick J Blackall , Thom Cuddihy , Scott A Beatson , Brian M Forde , Conny Turni

Clinical Implementation of Routine Whole-genome Sequencing for Hospital Infection Control of Multi-drug Resistant Pathogens.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Avec: Brian M Forde , Haakon Bergh , Thom Cuddihy , Krispin Hajkowicz , Trish Hurst , E Geoffrey Playford , Belinda C Henderson , Naomi Runnegar , Julia Clark , Amy V Jennison , Susan Moss , Anna Hume , Hugo Leroux , Scott A Beatson , David L Paterson , Patrick N A Harris

HAIviz: an interactive dashboard for visualising and integrating healthcare-associated genomic epidemiological data.

Microbial genomics

Avec: Budi Permana , Patrick N A Harris , Leah W Roberts , Thom Cuddihy , David L Paterson , Scott A Beatson , Brian M Forde

Optimized Method for Bacterial Nucleic Acid Extraction from Positive Blood Culture Broth for Whole-Genome Sequencing, Resistance Phenotype Prediction, and Downstream Molecular Applications.

Journal of clinical microbiology

Avec: Michelle J Bauer , Anna Maria Peri , Lukas Lüftinger , Stephan Beisken , Haakon Bergh , Brian M Forde , Cameron Buckley , Thom Cuddihy , Patrice Tan , David L Paterson , David M Whiley , Patrick N A Harris

SRA Down Under: Cache and Analysis Platform for Infectious Disease.

Studies in health technology and informatics

Avec: Thom Cuddihy , Brian Forde , Nicholas Rhodes , David Paterson , Dominique Gorse , Scott Beatson , Patrick Harris

Phase variation in the glycosyltransferase genes of

Microbial genomics

Avec: Lida Omaleki , Patrick J Blackall , Thom Cuddihy , Rhys T White , Jodi M Courtice , Conny Turni , Brian M Forde , Scott A Beatson

ScrepYard: An online resource for disulfide-stabilized tandem repeat peptides.

Protein science : a publication of the Protein Society

Avec: Junyu Liu , Michael Maxwell , Thom Cuddihy , Theo Crawford , Madeline Bassetti , Cameron Hyde , Steve Peigneur , Jan Tytgat , Eivind A B Undheim , Mehdi Mobli

CATHAI: cluster analysis tool for healthcare-associated infections.

Bioinformatics advances

Avec: Thom Cuddihy , Patrick N A Harris , Budi Permana , Scott A Beatson , Brian M Forde

Réseau de co-auteurs

Brian M Forde 7 collaborations

Patrick N A Harris 5 collaborations

Scott A Beatson 5 collaborations

Budi Permana 3 collaborations

David L Paterson 3 collaborations

Michelle J Bauer 2 collaborations

Lida Omaleki 2 collaborations

Patrick J Blackall 2 collaborations

Conny Turni 2 collaborations

Haakon Bergh 2 collaborations

Ian Gassiep 1 collaboration

Delaney Burnard 1 collaboration

Mark D Chatfield 1 collaboration

Weiping Ling 1 collaboration

Robert Norton 1 collaboration

Yin Xiang Setoh 1 collaboration

Alberto A Amarilla 1 collaboration

Nias Y G Peng 1 collaboration

Rebecca E Griffiths 1 collaboration

Julio Carrera 1 collaboration

Morgan E Freney 1 collaboration

Eri Nakayama 1 collaboration

Shinya Ogawa 1 collaboration

Daniel Watterson 1 collaboration

Naphak Modhiran 1 collaboration

Faith Elizabeth Nanyonga 1 collaboration

Francisco J Torres 1 collaboration

Andrii Slonchak 1 collaboration

Parthiban Periasamy 1 collaboration

Natalie A Prow 1 collaboration

Bing Tang 1 collaboration

Jessica Harrison 1 collaboration

Jody Hobson-Peters 1 collaboration

Justin Cooper-White 1 collaboration

Roy A Hall 1 collaboration

Paul R Young 1 collaboration

Jason M Mackenzie 1 collaboration

Ernst Wolvetang 1 collaboration

Jesse D Bloom 1 collaboration

Andreas Suhrbier 1 collaboration

Alexander A Khromykh 1 collaboration

Krispin Hajkowicz 1 collaboration

Trish Hurst 1 collaboration

E Geoffrey Playford 1 collaboration

Belinda C Henderson 1 collaboration

Naomi Runnegar 1 collaboration

Julia Clark 1 collaboration

Amy V Jennison 1 collaboration

Susan Moss 1 collaboration

Anna Hume 1 collaboration

Hugo Leroux 1 collaboration

Leah W Roberts 1 collaboration

Anna Maria Peri 1 collaboration

Lukas Lüftinger 1 collaboration

Stephan Beisken 1 collaboration

Cameron Buckley 1 collaboration

Patrice Tan 1 collaboration

David M Whiley 1 collaboration

Brian Forde 1 collaboration

Nicholas Rhodes 1 collaboration

David Paterson 1 collaboration

Dominique Gorse 1 collaboration

Scott Beatson 1 collaboration

Patrick Harris 1 collaboration

Rhys T White 1 collaboration

Jodi M Courtice 1 collaboration

Junyu Liu 1 collaboration

Michael Maxwell 1 collaboration

Theo Crawford 1 collaboration

Madeline Bassetti 1 collaboration

Cameron Hyde 1 collaboration

Steve Peigneur 1 collaboration

Jan Tytgat 1 collaboration

Eivind A B Undheim 1 collaboration

Mehdi Mobli 1 collaboration