Whole genome sequence of the soybean aphid, Aphis glycines.
Aphids
Aphis glycines
Genomics
Whole genome
Journal
Insect biochemistry and molecular biology
ISSN: 1879-0240
Titre abrégé: Insect Biochem Mol Biol
Pays: England
ID NLM: 9207282
Informations de publication
Date de publication:
08 2020
08 2020
Historique:
received:
10
05
2016
revised:
03
01
2017
accepted:
14
01
2017
pubmed:
26
1
2017
medline:
30
12
2020
entrez:
26
1
2017
Statut:
ppublish
Résumé
Aphids are emerging as model organisms for both basic and applied research. Of the 5,000 estimated species, only three aphids have published whole genome sequences: the pea aphid Acyrthosiphon pisum, the Russian wheat aphid, Diuraphis noxia, and the green peach aphid, Myzus persicae. We present the whole genome sequence of a fourth aphid, the soybean aphid (Aphis glycines), which is an extreme specialist and an important invasive pest of soybean (Glycine max). The availability of genomic resources is important to establish effective and sustainable pest control, as well as to expand our understanding of aphid evolution. We generated a 302.9 Mbp draft genome assembly for Ap. glycines using a hybrid sequencing approach. This assembly shows high completeness with 19,182 predicted genes, 92% of known Ap. glycines transcripts mapping to contigs, and substantial continuity with a scaffold N
Identifiants
pubmed: 28119199
pii: S0965-1748(17)30005-X
doi: 10.1016/j.ibmb.2017.01.005
pii:
doi:
Substances chimiques
DNA Transposable Elements
0
Cytochrome P-450 Enzyme System
9035-51-2
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
102917Informations de copyright
Copyright © 2017 Elsevier Ltd. All rights reserved.