The nuts and bolts of the Haloferax CRISPR-Cas system I-B.


Journal

RNA biology
ISSN: 1555-8584
Titre abrégé: RNA Biol
Pays: United States
ID NLM: 101235328

Informations de publication

Date de publication:
04 2019
Historique:
pubmed: 14 4 2018
medline: 22 11 2019
entrez: 14 4 2018
Statut: ppublish

Résumé

Invading genetic elements pose a constant threat to prokaryotic survival, requiring an effective defence. Eleven years ago, the arsenal of known defence mechanisms was expanded by the discovery of the CRISPR-Cas system. Although CRISPR-Cas is present in the majority of archaea, research often focuses on bacterial models. Here, we provide a perspective based on insights gained studying CRISPR-Cas system I-B of the archaeon Haloferax volcanii. The system relies on more than 50 different crRNAs, whose stability and maintenance critically depend on the proteins Cas5 and Cas7, which bind the crRNA and form the Cascade complex. The interference machinery requires a seed sequence and can interact with multiple PAM sequences. H. volcanii stands out as the first example of an organism that can tolerate autoimmunity via the CRISPR-Cas system while maintaining a constitutively active system. In addition, the H. volcanii system was successfully developed into a tool for gene regulation.

Identifiants

pubmed: 29649958
doi: 10.1080/15476286.2018.1460994
pmc: PMC6546412
doi:

Substances chimiques

CRISPR-Associated Proteins 0
RNA, Archaeal 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

469-480

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Auteurs

Lisa-Katharina Maier (LK)

a Biology II, Ulm University , Ulm , Germany.

Aris-Edda Stachler (AE)

a Biology II, Ulm University , Ulm , Germany.

Jutta Brendel (J)

a Biology II, Ulm University , Ulm , Germany.

Britta Stoll (B)

a Biology II, Ulm University , Ulm , Germany.

Susan Fischer (S)

a Biology II, Ulm University , Ulm , Germany.

Karina A Haas (KA)

a Biology II, Ulm University , Ulm , Germany.
b Microbiology and Biotechnology, Ulm University , Ulm , Germany.

Thandi S Schwarz (TS)

a Biology II, Ulm University , Ulm , Germany.

Omer S Alkhnbashi (OS)

c Freiburg Bioinformatics Group, Department of Computer Science , University of Freiburg , Georges-Köhler-Allee 106, Freiburg , Germany.

Kundan Sharma (K)

e Max Planck Institute of Biophysical Chemistry , Am Faßberg 11, Göttingen , Germany.
f Ludwig Institute for Cancer Research, University of Oxford , Oxford , United Kingdom.

Henning Urlaub (H)

e Max Planck Institute of Biophysical Chemistry , Am Faßberg 11, Göttingen , Germany.
g Institute for Clinical Chemistry, University Medical Center Göttingen , Robert Koch Straße 10, Göttingen , Germany.

Rolf Backofen (R)

c Freiburg Bioinformatics Group, Department of Computer Science , University of Freiburg , Georges-Köhler-Allee 106, Freiburg , Germany.
d Centre for Biological Signalling Studies (BIOSS), Cluster of Excellence, University of Freiburg , Germany.

Uri Gophna (U)

h School of Molecular Cell Biology & Biotechnology, George S. Wise, Faculty of Life Sciences, Tel Aviv University , Tel Aviv , Israel.

Anita Marchfelder (A)

a Biology II, Ulm University , Ulm , Germany.

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Classifications MeSH