Integrated analysis of in vitro data and the adverse outcome pathway framework for prioritization and regulatory applications: An exploratory case study using publicly available data on piperonyl butoxide and liver models.
Adverse outcome pathways
Transcriptomics
in silico methods
in vitro data
Journal
Toxicology in vitro : an international journal published in association with BIBRA
ISSN: 1879-3177
Titre abrégé: Toxicol In Vitro
Pays: England
ID NLM: 8712158
Informations de publication
Date de publication:
Feb 2019
Feb 2019
Historique:
received:
09
05
2018
revised:
31
08
2018
accepted:
03
09
2018
pubmed:
10
9
2018
medline:
15
1
2019
entrez:
10
9
2018
Statut:
ppublish
Résumé
The integration of existing knowledge to support the risk assessment of chemicals is an ongoing challenge for scientists, risk assessors and risk managers. In addition, European Union regulations limiting the use of new animal testing in cosmetics makes already existing information even more valuable. Applying a previous SEURAT-1 program framework to derive predictions of in vivo toxicity responses for a compound, we selected piperonyl butoxide (PBO) as a case study for identification of knowledge and methodology gaps in understanding a compound's effects on the human liver. This is investigated through integration of data from human in vitro transcriptomics studies, biological pathway analysis, chemical and disease associations, and adverse outcome pathway (AOP) information. The outcomes of the analysis are used to generate AOPs of liver-related endpoints, identifying areas of concern for risk assessors and regulators. We demonstrate that integration of data through already existing and publicly available tools can produce outcomes comparable to those that may be found through more conventional time- and resource-intensive methods. It is also expected that, with more refinement, this approach could in the future provide evidence to support chemical risk assessment, while also identifying data gaps for which additional testing may be needed.
Identifiants
pubmed: 30196099
pii: S0887-2333(18)30523-X
doi: 10.1016/j.tiv.2018.09.002
pii:
doi:
Substances chimiques
Pesticide Synergists
0
Piperonyl Butoxide
LWK91TU9AH
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
23-32Informations de copyright
Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.