The fecal virome of red-crowned cranes.
Journal
Archives of virology
ISSN: 1432-8798
Titre abrégé: Arch Virol
Pays: Austria
ID NLM: 7506870
Informations de publication
Date de publication:
Jan 2019
Jan 2019
Historique:
received:
20
06
2018
accepted:
29
08
2018
pubmed:
19
9
2018
medline:
6
2
2019
entrez:
19
9
2018
Statut:
ppublish
Résumé
The red-crowned crane is one of the rarest crane species, and its population is decreasing due to loss of habitat, poisoning, and infections. Using a viral metagenomics approach, we analyzed the virome of feces from wild and captive red-crowned cranes, which were pooled separately. Vertebrate viruses belonging to the families Picornaviridae, Parvoviridae, Circoviridae, and Caliciviridae were detected. Among the members of the family Picornaviridae, we found three that appear to represent new genera. Six nearly complete genomes from members of the family Parvoviridae were also obtained, including four new members of the proposed genus "Chapparvovirus", and two members of the genus Aveparvovirus. Six small circular DNA genomes were also characterized. One nearly complete genome showing a low level of sequence identity to caliciviruses was also characterized. Numerous viruses believed to infect insects, plants, and crustaceans were also identified, which were probably derived from the diet of red-crowned cranes. This study increases our understanding of the enteric virome of red-crowned cranes and provides a baseline for comparison to those of other birds or following disease outbreaks.
Identifiants
pubmed: 30225519
doi: 10.1007/s00705-018-4037-x
pii: 10.1007/s00705-018-4037-x
pmc: PMC7086969
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
3-16Subventions
Organisme : National Key Research and Development Programs of China
ID : No. 2017YFC1200201
Organisme : National Natural Science Foundation of China
ID : No. 81741062
Organisme : Jiangsu Provincial Key Research and Development Projects
ID : No. BE2017693
Organisme : the Professional Research Foundation for Advanced Talents of Jiangsu University
ID : No. 12JDG085
Organisme : the Professional Research Foundation for Advanced Talents of Jiangsu University
ID : No. 13JDG087
Organisme : the Postdoctoral Foundation of Jiangsu Province
ID : No. 1302058C
Organisme : the Postdoctoral Foundation of Jiangsu Province
ID : No. 1302057C
Organisme : Postdoctoral Research Foundation of China
ID : No. 2014M561597
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