Identification of Small-Molecule Modulators of Diguanylate Cyclase by FRET-Based High-Throughput Screening.
Allosteric Regulation
/ drug effects
Caulobacter crescentus
/ enzymology
Dose-Response Relationship, Drug
Enzyme Inhibitors
/ chemical synthesis
Escherichia coli Proteins
/ antagonists & inhibitors
Molecular Structure
Phosphorus-Oxygen Lyases
/ antagonists & inhibitors
Small Molecule Libraries
/ chemical synthesis
Structure-Activity Relationship
FRET
c-di-GMP
diguanylate cyclase inhibitors
high-throughput screening
structure-activity relationships
Journal
Chembiochem : a European journal of chemical biology
ISSN: 1439-7633
Titre abrégé: Chembiochem
Pays: Germany
ID NLM: 100937360
Informations de publication
Date de publication:
01 02 2019
01 02 2019
Historique:
received:
04
10
2018
pubmed:
6
11
2018
medline:
28
11
2019
entrez:
6
11
2018
Statut:
ppublish
Résumé
The bacterial second messenger cyclic diguanosine monophosphate (c-di-GMP) is a key regulator of cellular motility, the cell cycle, and biofilm formation with its resultant antibiotic tolerance, which can make chronic infections difficult to treat. Therefore, diguanylate cyclases, which regulate the spatiotemporal production of c-di-GMP, might be attractive drug targets for control of biofilm formation that is part of chronic infections. We present a FRET-based biochemical high-throughput screening approach coupled with detailed structure-activity studies to identify synthetic small-molecule modulators of the diguanylate cyclase DgcA from Caulobacter crescentus. We identified a set of seven small molecules that regulate DgcA enzymatic activity in the low-micromolar range. Subsequent structure-activity studies on selected scaffolds revealed a remarkable diversity of modulatory behavior, including slight chemical substitutions that reverse the effects from allosteric enzyme inhibition to activation. The compounds identified represent new chemotypes and are potentially developable into chemical genetic tools for the dissection of c-di-GMP signaling networks and alteration of c-di-GMP-associated phenotypes. In sum, our studies underline the importance of detailed mechanism-of-action studies for inhibitors of c-di-GMP signaling and demonstrate the complex interplay between synthetic small molecules and the regulatory mechanisms that control the activity of diguanylate cyclases.
Identifiants
pubmed: 30395379
doi: 10.1002/cbic.201800593
pmc: PMC6509406
mid: NIHMS1019449
doi:
Substances chimiques
Enzyme Inhibitors
0
Escherichia coli Proteins
0
Small Molecule Libraries
0
Phosphorus-Oxygen Lyases
EC 4.6.-
diguanylate cyclase
EC 4.6.1.-
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
394-407Subventions
Organisme : NINDS NIH HHS
ID : R21 NS067579
Pays : United States
Organisme : NIAID NIH HHS
ID : U54 AI057141
Pays : United States
Organisme : NIAID NIH HHS
ID : U54 AI057159
Pays : United States
Informations de copyright
© 2019 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.
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