Independent association of whole blood miR-328 expression and polymorphism at 3'UTR of the PAX6 gene with myopia.


Journal

Gene
ISSN: 1879-0038
Titre abrégé: Gene
Pays: Netherlands
ID NLM: 7706761

Informations de publication

Date de publication:
01 Mar 2019
Historique:
received: 01 06 2018
revised: 17 09 2018
accepted: 13 11 2018
pubmed: 20 11 2018
medline: 19 1 2019
entrez: 20 11 2018
Statut: ppublish

Résumé

This study aimed to find associations between miR-328 expression in whole blood, polymorphism at 3'UTR of the PAX6 gene (paired box homeotic gene 6) and myopia. We evaluated 451 individuals (142 individuals with low, 49 with moderate and 13 with high-degree myopia, and 247 healthy individuals). DNA and RNA were extracted from peripheral blood samples. Expression of miR-328 was assessed and genotyping of single-nucleotide polymorphisms (SNPs) of the PAX6 (rs662702) performed using the Applied Biosystems 7900HT Real-Time Polymerase Chain Reaction System. Moderate and high degree myopia showed significant differences between TT and CT genotypes of the PAX6 gene (p < 0.001). In the myopia group, 71.4% of the subjects had the TT genotype and 28.6% had the CT genotype; meanwhile in the control group, 97.1% had the TT genotype and 2.9% had the CT genotype. The odds ratio of having moderate and/or high degree myopia for individuals with the CT genotype was 13.6 (2.865-64.55) 95% CI versus TT genotype (p = 0.001). MiR-328 results showed that ∆Ct values differed statistically significantly between the myopia and control groups. Patients with myopia in the peripheral blood cells had a higher expression of miR-328 than controls (p < 0.05). Significant differences were detected between the PAX6 gene (rs662702) TT and CT genotypes in moderate and high degree myopia; the risk C allele increased the risk for myopia. The expression level of miR-328 in peripheral blood cells was higher in patients with myopia than controls. We did not find the association between expression of mir-328 in the peripheral blood cells and PAX6 gene (rs662702) polymorphism comparing myopia and control groups.

Identifiants

pubmed: 30453065
pii: S0378-1119(18)31174-0
doi: 10.1016/j.gene.2018.11.030
pii:
doi:

Substances chimiques

3' Untranslated Regions 0
Biomarkers 0
MIRN328 microRNA, human 0
MicroRNAs 0
PAX6 Transcription Factor 0
PAX6 protein, human 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

151-155

Informations de copyright

Copyright © 2018 Elsevier B.V. All rights reserved.

Auteurs

Edita Kunceviciene (E)

Institute of Biological Systems and Genetics Research, Lithuanian University of Health Sciences, Tilzes 18, Kaunas, Lithuania. Electronic address: edita.kunceviciene@lsmuni.lt.

Rasa Liutkeviciene (R)

Department of Ophthalmology, Lithuanian University of Health Sciences, Eiveniu 2, Kaunas, Lithuania.

Brigita Budiene (B)

Department of Ophthalmology, Lithuanian University of Health Sciences, Eiveniu 2, Kaunas, Lithuania.

Margarita Sriubiene (M)

Institute of Biological Systems and Genetics Research, Lithuanian University of Health Sciences, Tilzes 18, Kaunas, Lithuania.

Alina Smalinskiene (A)

Institute of Biological Systems and Genetics Research, Lithuanian University of Health Sciences, Tilzes 18, Kaunas, Lithuania.

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Classifications MeSH