A novel CRX variant (p.R98X) is identified in a Chinese family of Retinitis pigmentosa with atypical and mild manifestations.


Journal

Genes & genomics
ISSN: 2092-9293
Titre abrégé: Genes Genomics
Pays: Korea (South)
ID NLM: 101481027

Informations de publication

Date de publication:
03 2019
Historique:
received: 03 09 2018
accepted: 04 11 2018
pubmed: 22 11 2018
medline: 14 5 2019
entrez: 22 11 2018
Statut: ppublish

Résumé

Retinitis pigmentosa (RP) is the most common form of hereditary retinal degeneration that can cause inherited blindness. RP has extreme genetic and clinical heterogeneity, which brings a major obstacle to obtaining an accurate molecular diagnosis. To analyze the genetic defect in a Chinese family of RP with a few atypical manifestations. Whole-exome sequencing (WES) was applied to identify the disease-associated genes. Sanger sequencing was performed to validate the variants of candidate genes in the patient and his parents. In vitro expression analysis was further conducted to examine the potential biological function of the gene variant. A heterozygous nonsense variant c.292C > T (p.R98X) of CRX gene was identified to be present in the affected male. The c.292C > T variant of CRX was absent in all of the searched databases, including the 10,000 Chinese exome database. The nonsense variant was supposed to result in a truncated CRX protein with a destroyed homedomain (HD), which is essential for CRX translation. Interestingly, the following assay showed that the potential truncated protein was not detected, indicating that the variant may cause a loss-of-function mutation of CRX gene. We identified a novel heterozygous null mutation in the CRX gene which was the first evidence of a nonsense mutation in the HD domain of CRX. Our finding suggested that the haploinsufficiency mutation of CRX gene contributed to the atypical and mild manifestations of the autosomal dominant RP in the Chinese family.

Sections du résumé

BACKGROUND
Retinitis pigmentosa (RP) is the most common form of hereditary retinal degeneration that can cause inherited blindness. RP has extreme genetic and clinical heterogeneity, which brings a major obstacle to obtaining an accurate molecular diagnosis.
OBJECTIVE
To analyze the genetic defect in a Chinese family of RP with a few atypical manifestations.
METHODS
Whole-exome sequencing (WES) was applied to identify the disease-associated genes. Sanger sequencing was performed to validate the variants of candidate genes in the patient and his parents. In vitro expression analysis was further conducted to examine the potential biological function of the gene variant.
RESULTS
A heterozygous nonsense variant c.292C > T (p.R98X) of CRX gene was identified to be present in the affected male. The c.292C > T variant of CRX was absent in all of the searched databases, including the 10,000 Chinese exome database. The nonsense variant was supposed to result in a truncated CRX protein with a destroyed homedomain (HD), which is essential for CRX translation. Interestingly, the following assay showed that the potential truncated protein was not detected, indicating that the variant may cause a loss-of-function mutation of CRX gene.
CONCLUSION
We identified a novel heterozygous null mutation in the CRX gene which was the first evidence of a nonsense mutation in the HD domain of CRX. Our finding suggested that the haploinsufficiency mutation of CRX gene contributed to the atypical and mild manifestations of the autosomal dominant RP in the Chinese family.

Identifiants

pubmed: 30460480
doi: 10.1007/s13258-018-0763-4
pii: 10.1007/s13258-018-0763-4
doi:

Substances chimiques

Codon, Nonsense 0
Homeodomain Proteins 0
Trans-Activators 0
cone rod homeobox protein 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

359-366

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Auteurs

Yingchuan Zhu (Y)

Department of Medical Genetics, West China Medical School, West China Hospital, Sichuan University, 1st Keyuan 4 Lu, GaoPeng Da Dao, Chengdu, 610041, Sichuan, China.

Hao Tan (H)

Department of Medical Genetics, West China Medical School, West China Hospital, Sichuan University, 1st Keyuan 4 Lu, GaoPeng Da Dao, Chengdu, 610041, Sichuan, China.

Jiarong Zeng (J)

Department of Medical Genetics, West China Medical School, West China Hospital, Sichuan University, 1st Keyuan 4 Lu, GaoPeng Da Dao, Chengdu, 610041, Sichuan, China.

Dachang Tao (D)

Department of Medical Genetics, West China Medical School, West China Hospital, Sichuan University, 1st Keyuan 4 Lu, GaoPeng Da Dao, Chengdu, 610041, Sichuan, China.

Yongxin Ma (Y)

Department of Medical Genetics, West China Medical School, West China Hospital, Sichuan University, 1st Keyuan 4 Lu, GaoPeng Da Dao, Chengdu, 610041, Sichuan, China.

Yunqiang Liu (Y)

Department of Medical Genetics, West China Medical School, West China Hospital, Sichuan University, 1st Keyuan 4 Lu, GaoPeng Da Dao, Chengdu, 610041, Sichuan, China. yq_liu@scu.edu.cn.

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