Quantitative design rules for protein-resistant surface coatings using machine learning.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
22 01 2019
Historique:
received: 10 09 2018
accepted: 23 11 2018
entrez: 24 1 2019
pubmed: 24 1 2019
medline: 7 7 2020
Statut: epublish

Résumé

Preventing biological contamination (biofouling) is key to successful development of novel surface and nanoparticle-based technologies in the manufacturing industry and biomedicine. Protein adsorption is a crucial mediator of the interactions at the bio - nano -materials interface but is not well understood. Although general, empirical rules have been developed to guide the design of protein-resistant surface coatings, they are still largely qualitative. Herein we demonstrate that this knowledge gap can be addressed by using machine learning approaches to extract quantitative relationships between the material surface chemistry and the protein adsorption characteristics. We illustrate how robust linear and non-linear models can be constructed to accurately predict the percentage of protein adsorbed onto these surfaces using lysozyme or fibrinogen as prototype common contaminants. Our computational models could recapitulate the adsorption of proteins on functionalised surfaces in a test set with an r

Identifiants

pubmed: 30670792
doi: 10.1038/s41598-018-36597-5
pii: 10.1038/s41598-018-36597-5
pmc: PMC6342937
doi:

Substances chimiques

Immobilized Proteins 0
Polymers 0
Fibrinogen 9001-32-5
Muramidase EC 3.2.1.17

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

265

Références

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Auteurs

Tu C Le (TC)

School of Engineering, RMIT University, GPO Box 2476, Melbourne, Victoria, 3001, Australia. Tu.Le@rmit.edu.au.

Matthew Penna (M)

School of Engineering, RMIT University, GPO Box 2476, Melbourne, Victoria, 3001, Australia.
ARC Industrial Transformation Research Hub for Australian Steel Manufacturing, Wollongong, NSW, 2522, Australia.

David A Winkler (DA)

Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, Victoria, 3052, Australia.
La Trobe Institute for Molecular Science, La Trobe University, Bundoora, Victoria, 3084, Australia.
CSIRO Manufacturing, Clayton, Victoria, 3168, Australia.
School of Pharmacy, University of Nottingham, Nottingham, NG7 2RD, UK.

Irene Yarovsky (I)

School of Engineering, RMIT University, GPO Box 2476, Melbourne, Victoria, 3001, Australia. Irene.Yarovsky@rmit.edu.au.
ARC Industrial Transformation Research Hub for Australian Steel Manufacturing, Wollongong, NSW, 2522, Australia. Irene.Yarovsky@rmit.edu.au.

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Classifications MeSH