Priors and Posteriors in Bayesian Timing of Divergence Analyses: The Age of Butterflies Revisited.
Butterflies
Early Cretaceous
Papilionoidea
fossils
host plants
marginal prior
time-calibration
Journal
Systematic biology
ISSN: 1076-836X
Titre abrégé: Syst Biol
Pays: England
ID NLM: 9302532
Informations de publication
Date de publication:
01 09 2019
01 09 2019
Historique:
received:
05
02
2018
revised:
11
01
2019
accepted:
15
01
2019
pubmed:
29
1
2019
medline:
10
1
2020
entrez:
29
1
2019
Statut:
ppublish
Résumé
The need for robust estimates of times of divergence is essential for downstream analyses, yet assessing this robustness is still rare. We generated a time-calibrated genus-level phylogeny of butterflies (Papilionoidea), including 994 taxa, up to 10 gene fragments and an unprecedented set of 12 fossils and 10 host-plant node calibration points. We compared marginal priors and posterior distributions to assess the relative importance of the former on the latter. This approach revealed a strong influence of the set of priors on the root age but for most calibrated nodes posterior distributions shifted from the marginal prior, indicating significant information in the molecular data set. Using a very conservative approach we estimated an origin of butterflies at 107.6 Ma, approximately equivalent to the latest Early Cretaceous, with a credibility interval ranging from 89.5 Ma (mid Late Cretaceous) to 129.5 Ma (mid Early Cretaceous). In addition, we tested the effects of changing fossil calibration priors, tree prior, different sets of calibrations and different sampling fractions but our estimate remained robust to these alternative assumptions. With 994 genera, this tree provides a comprehensive source of secondary calibrations for studies on butterflies.
Identifiants
pubmed: 30690622
pii: 5300234
doi: 10.1093/sysbio/syz002
pmc: PMC6893297
doi:
Banques de données
Dryad
['10.5061/dryad.fb88292']
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
797-813Informations de copyright
© The Author(s) 2019. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.
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