Tyrosine metabolism: identification of a key residue in the acquisition of prephenate aminotransferase activity by 1β aspartate aminotransferase.


Journal

The FEBS journal
ISSN: 1742-4658
Titre abrégé: FEBS J
Pays: England
ID NLM: 101229646

Informations de publication

Date de publication:
06 2019
Historique:
received: 27 07 2018
revised: 30 01 2019
accepted: 14 02 2019
pubmed: 17 2 2019
medline: 6 5 2020
entrez: 17 2 2019
Statut: ppublish

Résumé

Alternative routes for the post-chorismate branch of the biosynthetic pathway leading to tyrosine exist, the 4-hydroxyphenylpyruvate or the arogenate route. The arogenate route involves the transamination of prephenate into arogenate. In a previous study, we found that, depending on the microorganisms possessing the arogenate route, three different aminotransferases evolved to perform prephenate transamination, that is, 1β aspartate aminotransferase (1β AAT), N-succinyl-l,l-diaminopimelate aminotransferase, and branched-chain aminotransferase. The present work aimed at identifying molecular determinant(s) of 1β AAT prephenate aminotransferase (PAT) activity. To that purpose, we conducted X-ray crystal structure analysis of two PAT competent 1β AAT from Arabidopsis thaliana and Rhizobium meliloti and one PAT incompetent 1β AAT from R. meliloti. This structural analysis supported by site-directed mutagenesis, modeling, and molecular dynamics simulations allowed us to identify a molecular determinant of PAT activity in the flexible N-terminal loop of 1β AAT. Our data reveal that a Lys/Arg/Gln residue in position 12 in the sequence (numbering according to Thermus thermophilus 1β AAT), present only in PAT competent enzymes, could interact with the 4-hydroxyl group of the prephenate substrate, and thus may have a central role in the acquisition of PAT activity by 1β AAT.

Identifiants

pubmed: 30771275
doi: 10.1111/febs.14789
doi:

Substances chimiques

Amino Acids, Dicarboxylic 0
Arabidopsis Proteins 0
Cyclohexanecarboxylic Acids 0
Cyclohexenes 0
Recombinant Proteins 0
Tyrosine 42HK56048U
pretyrosine 53078-86-7
Transaminases EC 2.6.1.-
prephenate aminotransferase EC 2.6.1.-
Aspartate Aminotransferases EC 2.6.1.1
prephenic acid Z66B98Z97I

Types de publication

Comparative Study Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2118-2134

Subventions

Organisme : Grenoble Alliance for Integrated Structural Cell Biology
ID : ANR-10-LABEX-04
Pays : International

Informations de copyright

© 2019 Federation of European Biochemical Societies.

Auteurs

Cecile Giustini (C)

INRA, CNRS, CEA, BIG-LPCV, University of Grenoble Alpes, France.

Matthieu Graindorge (M)

INRA, CNRS, CEA, BIG-LPCV, University of Grenoble Alpes, France.

David Cobessi (D)

CNRS, CEA, IBS, University of Grenoble Alpes, France.

Serge Crouzy (S)

CEA, CNRS, BIG-LCBM, University of Grenoble Alpes, France.

Adeline Robin (A)

INRA, CNRS, CEA, BIG-LPCV, University of Grenoble Alpes, France.

Gilles Curien (G)

INRA, CNRS, CEA, BIG-LPCV, University of Grenoble Alpes, France.

Michel Matringe (M)

INRA, CNRS, CEA, BIG-LPCV, University of Grenoble Alpes, France.

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Classifications MeSH