Tyrosine metabolism: identification of a key residue in the acquisition of prephenate aminotransferase activity by 1β aspartate aminotransferase.
Amino Acid Motifs
Amino Acid Sequence
Amino Acids, Dicarboxylic
/ biosynthesis
Arabidopsis
/ enzymology
Arabidopsis Proteins
/ chemistry
Aspartate Aminotransferases
/ chemistry
Chloroplasts
/ enzymology
Conserved Sequence
Crystallography, X-Ray
Cyclohexanecarboxylic Acids
/ metabolism
Cyclohexenes
/ metabolism
Models, Molecular
Molecular Dynamics Simulation
Protein Conformation
Recombinant Proteins
/ metabolism
Sequence Alignment
Sequence Homology, Amino Acid
Sinorhizobium meliloti
/ enzymology
Species Specificity
Substrate Specificity
Thermus thermophilus
/ enzymology
Transaminases
/ chemistry
Tyrosine
/ analogs & derivatives
1β aspartate/prephenate aminotransferase
arogenate route
molecular modeling
structure function
tyrosine metabolism
Journal
The FEBS journal
ISSN: 1742-4658
Titre abrégé: FEBS J
Pays: England
ID NLM: 101229646
Informations de publication
Date de publication:
06 2019
06 2019
Historique:
received:
27
07
2018
revised:
30
01
2019
accepted:
14
02
2019
pubmed:
17
2
2019
medline:
6
5
2020
entrez:
17
2
2019
Statut:
ppublish
Résumé
Alternative routes for the post-chorismate branch of the biosynthetic pathway leading to tyrosine exist, the 4-hydroxyphenylpyruvate or the arogenate route. The arogenate route involves the transamination of prephenate into arogenate. In a previous study, we found that, depending on the microorganisms possessing the arogenate route, three different aminotransferases evolved to perform prephenate transamination, that is, 1β aspartate aminotransferase (1β AAT), N-succinyl-l,l-diaminopimelate aminotransferase, and branched-chain aminotransferase. The present work aimed at identifying molecular determinant(s) of 1β AAT prephenate aminotransferase (PAT) activity. To that purpose, we conducted X-ray crystal structure analysis of two PAT competent 1β AAT from Arabidopsis thaliana and Rhizobium meliloti and one PAT incompetent 1β AAT from R. meliloti. This structural analysis supported by site-directed mutagenesis, modeling, and molecular dynamics simulations allowed us to identify a molecular determinant of PAT activity in the flexible N-terminal loop of 1β AAT. Our data reveal that a Lys/Arg/Gln residue in position 12 in the sequence (numbering according to Thermus thermophilus 1β AAT), present only in PAT competent enzymes, could interact with the 4-hydroxyl group of the prephenate substrate, and thus may have a central role in the acquisition of PAT activity by 1β AAT.
Substances chimiques
Amino Acids, Dicarboxylic
0
Arabidopsis Proteins
0
Cyclohexanecarboxylic Acids
0
Cyclohexenes
0
Recombinant Proteins
0
Tyrosine
42HK56048U
pretyrosine
53078-86-7
Transaminases
EC 2.6.1.-
prephenate aminotransferase
EC 2.6.1.-
Aspartate Aminotransferases
EC 2.6.1.1
prephenic acid
Z66B98Z97I
Types de publication
Comparative Study
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
2118-2134Subventions
Organisme : Grenoble Alliance for Integrated Structural Cell Biology
ID : ANR-10-LABEX-04
Pays : International
Informations de copyright
© 2019 Federation of European Biochemical Societies.