The role of hydrophobicity in the cold denaturation of proteins under high pressure: A study on apomyoglobin.


Journal

The Journal of chemical physics
ISSN: 1089-7690
Titre abrégé: J Chem Phys
Pays: United States
ID NLM: 0375360

Informations de publication

Date de publication:
21 Feb 2019
Historique:
entrez: 24 2 2019
pubmed: 24 2 2019
medline: 8 3 2019
Statut: ppublish

Résumé

An exciting debate arises when microscopic mechanisms involved in the denaturation of proteins at high pressures are explained. In particular, the issue emerges when the hydrophobic effect is invoked, given that hydrophobicity cannot elucidate by itself the volume changes measured during protein unfolding. In this work, we study by the use of molecular dynamics simulations and essential dynamics analysis the relation between the solvation dynamics, volume, and water structure when apomyoglobin is subjected to a hydrostatic pressure regime. Accordingly, the mechanism of cold denaturation of proteins under high-pressure can be related to the disruption of the hydrogen-bond network of water favoring the coexistence of two states, low-density and high-density water, which directly implies in the formation of a molten globule once the threshold of 200 MPa has been overcome.

Identifiants

pubmed: 30795674
doi: 10.1063/1.5080942
doi:

Substances chimiques

Apoproteins 0
Myoglobin 0
Solvents 0
apomyoglobin 0
Water 059QF0KO0R

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

075102

Auteurs

Yanis R Espinosa (YR)

Instituto de Física de Líquidos y Sistemas Biológicos (CONICET-UNLP), Calle 59 Nro 789, B1900BTE La Plata, Argentina.

Ernesto R Caffarena (ER)

Programa de Computação Científica (PROCC), Fundação Oswaldo Cruz, Manguinhos, CEP 21040-360 Rio de Janeiro, Brazil.

J Raúl Grigera (JR)

CEQUINOR, Universidad de La Plata and CONICET, 47 y 115, B1900 La Plata, Argentina.

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Classifications MeSH