Pocket similarity identifies selective estrogen receptor modulators as microtubule modulators at the taxane site.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
04 03 2019
Historique:
received: 27 04 2018
accepted: 19 01 2019
entrez: 6 3 2019
pubmed: 6 3 2019
medline: 24 4 2019
Statut: epublish

Résumé

Taxanes are a family of natural products with a broad spectrum of anticancer activity. This activity is mediated by interaction with the taxane site of beta-tubulin, leading to microtubule stabilization and cell death. Although widely used in the treatment of breast cancer and other malignancies, existing taxane-based therapies including paclitaxel and the second-generation docetaxel are currently limited by severe adverse effects and dose-limiting toxicity. To discover taxane site modulators, we employ a computational binding site similarity screen of > 14,000 drug-like pockets from PDB, revealing an unexpected similarity between the estrogen receptor and the beta-tubulin taxane binding pocket. Evaluation of nine selective estrogen receptor modulators (SERMs) via cellular and biochemical assays confirms taxane site interaction, microtubule stabilization, and cell proliferation inhibition. Our study demonstrates that SERMs can modulate microtubule assembly and raises the possibility of an estrogen receptor-independent mechanism for inhibiting cell proliferation.

Identifiants

pubmed: 30833575
doi: 10.1038/s41467-019-08965-w
pii: 10.1038/s41467-019-08965-w
pmc: PMC6399299
doi:

Substances chimiques

Antineoplastic Agents 0
Bridged-Ring Compounds 0
Ligands 0
Microtubule Proteins 0
Selective Estrogen Receptor Modulators 0
Taxoids 0
Tubulin 0
Tubulin Modulators 0
taxane 1605-68-1
Paclitaxel P88XT4IS4D

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1033

Subventions

Organisme : NIGMS NIH HHS
ID : R35 GM130286
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM102365
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA220284
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM121424
Pays : United States
Organisme : NCRR NIH HHS
ID : S10 RR026780
Pays : United States
Organisme : NHLBI NIH HHS
ID : U54 HL117798
Pays : United States
Organisme : NLM NIH HHS
ID : R01 LM005652
Pays : United States

Références

Nat Rev Drug Discov. 2004 Aug;3(8):673-83
pubmed: 15286734
Nat Methods. 2014 Jul;11(7):731-3
pubmed: 24859753
Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):19108-13
pubmed: 19855003
Proc Natl Acad Sci U S A. 1993 Oct 15;90(20):9552-6
pubmed: 8105478
Proc Natl Acad Sci U S A. 2006 Jul 5;103(27):10166-10173
pubmed: 16801540
Sci Rep. 2017 Sep 12;7(1):11261
pubmed: 28900159
Mol Syst Biol. 2016 Apr 22;12(4):864
pubmed: 27107013
Mol Biol Cell. 1999 Apr;10(4):947-59
pubmed: 10198049
Sci Transl Med. 2014 Mar 26;6(229):229ra43
pubmed: 24670687
Cell Death Dis. 2014 Oct 16;5:e1462
pubmed: 25321469
J Cell Biol. 1998 Sep 21;142(6):1519-32
pubmed: 9744881
Lancet Oncol. 2010 Dec;11(12):1135-41
pubmed: 21087898
Oncologist. 2000;5(5):388-92
pubmed: 11040275
Oncoscience. 2015 Jun 12;2(6):585-95
pubmed: 26244166
ACS Chem Biol. 2008 Mar 20;3(3):167-79
pubmed: 18225860
J Mol Biol. 2017 Mar 10;429(5):633-646
pubmed: 28104363
Cell. 2011 Mar 4;144(5):646-74
pubmed: 21376230
Br J Cancer. 2001 Nov 16;85(10):1472-7
pubmed: 11720431
Chem Biol Interact. 2004 Apr 15;147(3):273-85
pubmed: 15135083
Int J Mol Sci. 2017 Aug 09;18(8):
pubmed: 28792473
Mutat Res. 1991 Aug;263(4):269-76
pubmed: 1861692
Mol Biol Cell. 2014 Sep 15;25(18):2677-81
pubmed: 25213191
Trends Pharmacol Sci. 2013 Sep;34(9):508-17
pubmed: 23928289
PLoS Comput Biol. 2011 Dec;7(12):e1002326
pubmed: 22219723
J Cell Biol. 1984 Sep;99(3):940-6
pubmed: 6147357
Cell Cycle. 2005 Oct;4(10):1385-8
pubmed: 16138009
Nat Chem Biol. 2017 Jan;13(1):111-118
pubmed: 27870835
J Natl Cancer Inst. 2015 Mar 30;107(6):djv048
pubmed: 25825511
Bioinformatics. 2019 Jan 15;35(2):235-242
pubmed: 29985971
Mol Cancer Ther. 2006 Feb;5(2):270-8
pubmed: 16505100
Curr Biol. 1995 Aug 1;5(8):900-8
pubmed: 7583148
Adv Drug Deliv Rev. 2001 Mar 1;46(1-3):3-26
pubmed: 11259830
J Biol Chem. 1985 Mar 10;260(5):2819-25
pubmed: 3972806
Biochemistry. 1996 Jan 30;35(4):1304-10
pubmed: 8573587
J Biol Chem. 1997 Jul 4;272(27):17118-25
pubmed: 9202030
Lancet Oncol. 2011 Nov;12(12):1101-8
pubmed: 22018631
Nature. 1984 Nov 15-21;312(5991):237-42
pubmed: 6504138
Nat Rev Drug Discov. 2010 Oct;9(10):790-803
pubmed: 20885410
J Comput Chem. 2010 Jan 30;31(2):455-61
pubmed: 19499576
Nat Rev Clin Oncol. 2011 Feb 01;8(4):244-50
pubmed: 21283127
J Chem Inf Model. 2015 Aug 24;55(8):1663-72
pubmed: 26226489
Cancer Res. 1995 May 1;55(9):1863-8
pubmed: 7728754
Proc Natl Acad Sci U S A. 2001 Apr 24;98(9):5312-6
pubmed: 11309480
Sign Transduct Insights. 2016 Feb 10;5:1-7
pubmed: 26989346
Clin Cancer Res. 2008 Nov 15;14(22):7167-72
pubmed: 19010832
Cancer Res. 1985 Jun;45(6):2741-7
pubmed: 3986806
PLoS Comput Biol. 2015 Mar 31;11(3):e1004153
pubmed: 25826798
ChemMedChem. 2007 Jul;2(7):920-42
pubmed: 17530726
Cancer Biol Ther. 2004 May;3(5):460-7
pubmed: 15020841
Mol Endocrinol. 2010 Jun;24(6):1287-96
pubmed: 20375240
ACS Chem Biol. 2016 Aug 19;11(8):2244-53
pubmed: 27285961
Science. 2013 Feb 1;339(6119):587-90
pubmed: 23287720

Auteurs

Yu-Chen Lo (YC)

Department of Bioengineering, Stanford University, Stanford, CA, USA.

Olga Cormier (O)

Department of Biology, Stanford University, Stanford, CA, USA.

Tianyun Liu (T)

Department of Bioengineering, Stanford University, Stanford, CA, USA.
Department of Genetics, Stanford University, Stanford, CA, USA.

Kendall W Nettles (KW)

Department of Integrative Structural and Computational Biology, Scripps Research Institute, Jupiter, FL, USA.

John A Katzenellenbogen (JA)

Department of Chemistry, University of Illinois-Urbana Champaign, Champaign, IL, USA.

Tim Stearns (T)

Department of Biology, Stanford University, Stanford, CA, USA.
Department of Genetics, Stanford University, Stanford, CA, USA.

Russ B Altman (RB)

Department of Bioengineering, Stanford University, Stanford, CA, USA. Russ.Altman@stanford.edu.
Department of Genetics, Stanford University, Stanford, CA, USA. Russ.Altman@stanford.edu.

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Classifications MeSH