A Novel Orthohepadnavirus Identified in a Dead Maxwell's Duiker (

Animals Antelopes / virology Cote d'Ivoire Genetic Variation Genome, Viral Orthohepadnavirus / classification Parks, Recreational Phylogeny
Orthohepadnavirus artiodactyls bovid discovery hepadnavirus hybridization capture sequencing virus

Journal

Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722

Informations de publication

Date de publication:
19 03 2019
Historique:
received: 28 02 2019
revised: 11 03 2019
accepted: 16 03 2019
entrez: 22 3 2019
pubmed: 22 3 2019
medline: 18 12 2019
Statut: epublish

Résumé

New technologies enable viral discovery in a diversity of hosts, providing insights into viral evolution. We used one such approach, the virome capture sequencing for vertebrate viruses (VirCapSeq-VERT) platform, on 21 samples originating from six dead Maxwell's duikers (

Identifiants

DOI: 10.3390/v11030279 PMID: 30893858 PMC: PMC6466360
pubmed: 30893858
pii: v11030279
doi: 10.3390/v11030279
pmc: PMC6466360
pii:
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : NIAID NIH HHS
ID : U19 AI109761
Pays : United States
Organisme : NIH HHS
ID : AI109761
Pays : United States

Références

Proc Natl Acad Sci U S A. 1980 May;77(5):2941-5
pubmed: 6930677
Syst Biol. 2018 Sep 1;67(5):901-904
pubmed: 29718447
Emerg Infect Dis. 2005 Feb;11(2):283-90
pubmed: 15752448
J Virol. 1996 Jul;70(7):4210-9
pubmed: 8676441
BMC Evol Biol. 2007 Nov 08;7:214
pubmed: 17996036
Hepatology. 2003 Jun;37(6):1309-19
pubmed: 12774009
Virology. 2003 Sep 15;314(1):381-93
pubmed: 14517090
PLoS Negl Trop Dis. 2017 Sep 21;11(9):e0005960
pubmed: 28934219
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
Cell Host Microbe. 2017 Sep 13;22(3):387-399.e6
pubmed: 28867387
Virus Evol. 2016 Apr 09;2(1):vew007
pubmed: 27774300
Mol Biol Evol. 2017 Sep 1;34(9):2422-2424
pubmed: 28472384
Mol Biol Evol. 2010 Feb;27(2):221-4
pubmed: 19854763
Ecohealth. 2016 Sep;13(3):499-510
pubmed: 27436109
Virology. 2014 Jul;460-461:147-53
pubmed: 25010280
Proc Natl Acad Sci U S A. 1998 May 12;95(10):5757-61
pubmed: 9576957
Virology. 2018 Jan 15;514:88-97
pubmed: 29153861
Proc Natl Acad Sci U S A. 2013 Oct 1;110(40):16151-6
pubmed: 24043818
Virus Evol. 2018 Jun 08;4(1):vey016
pubmed: 29942656
Mol Biol Evol. 2013 Apr;30(4):772-80
pubmed: 23329690
Viruses. 2018 May 17;10(5):
pubmed: 29772771
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Science. 2004 Jan 16;303(5656):387-90
pubmed: 14726594
Lancet. 1995 May 20;345(8960):1271-4
pubmed: 7746057
Arch Virol. 2015 Jan;160(1):335-7
pubmed: 25193071
Virology. 2000 Feb 1;267(1):58-64
pubmed: 10648183
J Virol. 1984 Aug;51(2):367-75
pubmed: 6086950
Mol Cell Probes. 2010 Apr;24(2):110-3
pubmed: 19879351
Curr Opin Virol. 2016 Feb;16:86-94
pubmed: 26897577
Emerg Infect Dis. 2014 Jun;20(6):1009-11
pubmed: 24857667
Bioinformatics. 2012 Jun 15;28(12):1647-9
pubmed: 22543367
J Virol. 2000 May;74(10):4483-94
pubmed: 10775584
J Virol. 1987 May;61(5):1318-24
pubmed: 3573141
Emerg Infect Dis. 2013 Apr;19(4):638-40
pubmed: 23631923
Cold Spring Harb Perspect Med. 2016 Jan 04;6(1):a021360
pubmed: 26729756
Virol J. 2017 Feb 22;14(1):40
pubmed: 28222808
J Clin Virol. 2003 May;27(1):30-7
pubmed: 12727526
J Hepatol. 2018 Jun;68(6):1114-1122
pubmed: 29428874
Proc Natl Acad Sci U S A. 1978 Sep;75(9):4533-7
pubmed: 212758
J Virol. 2000 Jun;74(11):5377-81
pubmed: 10799618
mBio. 2015 Sep 22;6(5):e01491-15
pubmed: 26396248
Nature. 2017 Aug 2;548(7665):82-86
pubmed: 28770842
J Virol. 2016 Aug 12;90(17):7920-33
pubmed: 27334580

Auteurs

Jan F Gogarten (JF)

Epidemiology of Highly Pathogenic Microorganisms, Robert Koch Institute, 13353 Berlin, Germany. jan.gogarten@gmail.com.
Viral Evolution, Robert Koch Institute, 13353 Berlin, Germany. jan.gogarten@gmail.com.
Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. jan.gogarten@gmail.com.
Institute of Microbiology and Epizootics, Freie Universität Berlin, 14163 Berlin, Germany. jan.gogarten@gmail.com.
ORCID: 0000-0003-1889-4113

Markus Ulrich (M)

Epidemiology of Highly Pathogenic Microorganisms, Robert Koch Institute, 13353 Berlin, Germany. UlrichM@rki.de.

Nishit Bhuva (N)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. npb2123@cumc.columbia.edu.

Joel Garcia (J)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. jg2876@cumc.columbia.edu.

Komal Jain (K)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. kj2230@cumc.columbia.edu.

Bohyun Lee (B)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. bl2493@cumc.columbia.edu.

Therese Löhrich (T)

Epidemiology of Highly Pathogenic Microorganisms, Robert Koch Institute, 13353 Berlin, Germany. tloehrich@wwfcar.org.
World Wide Fund for Nature, Dzanga-Sangha Protected Areas, Bangui BP 1053, Central African Republic. tloehrich@wwfcar.org.

Alexandra Oleynik (A)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. ap2811@cumc.columbia.edu.

Emmanuel Couacy-Hymann (E)

Laboratoire National D'appui au Développement Agricole/Laboratoire Central de Pathologie Animale, Bingerville BP206, Côte d'Ivoire. chymann@hotmail.com.

Terence Fuh Neba (T)

World Wide Fund for Nature, Dzanga-Sangha Protected Areas, Bangui BP 1053, Central African Republic. TNeba@wwfcar.org.

Nischay Mishra (N)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. nm2641@cumc.columbia.edu.

Thomas Briese (T)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. tb2047@cumc.columbia.edu.

Sébastien Calvignac-Spencer (S)

Epidemiology of Highly Pathogenic Microorganisms, Robert Koch Institute, 13353 Berlin, Germany. CalvignacS@rki.de.
Viral Evolution, Robert Koch Institute, 13353 Berlin, Germany. CalvignacS@rki.de.

W Ian Lipkin (WI)

Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10027, USA. wil2001@cumc.columbia.edu.

Fabian H Leendertz (FH)

Epidemiology of Highly Pathogenic Microorganisms, Robert Koch Institute, 13353 Berlin, Germany. LeendertzF@rki.de.
Viral Evolution, Robert Koch Institute, 13353 Berlin, Germany. LeendertzF@rki.de.

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