Biallelic variants in DNA2 cause microcephalic primordial dwarfism.


Journal

Human mutation
ISSN: 1098-1004
Titre abrégé: Hum Mutat
Pays: United States
ID NLM: 9215429

Informations de publication

Date de publication:
08 2019
Historique:
received: 03 12 2018
revised: 15 03 2019
accepted: 28 04 2019
pubmed: 3 5 2019
medline: 31 3 2020
entrez: 3 5 2019
Statut: ppublish

Résumé

Microcephalic primordial dwarfism (MPD) is a group of rare single-gene disorders characterized by the extreme reduction in brain and body size from early development onwards. Proteins encoded by MPD-associated genes play important roles in fundamental cellular processes, notably genome replication and repair. Here we report the identification of four MPD individuals with biallelic variants in DNA2, which encodes an adenosine triphosphate (ATP)-dependent helicase/nuclease involved in DNA replication and repair. We demonstrate that the two intronic variants (c.1764-38_1764-37ins(53) and c.74+4A>C) found in these individuals substantially impair DNA2 transcript splicing. Additionally, we identify a missense variant (c.1963A>G), affecting a residue of the ATP-dependent helicase domain that is highly conserved between humans and yeast, with the resulting substitution (p.Thr655Ala) predicted to directly impact ATP/ADP (adenosine diphosphate) binding by DNA2. Our findings support the pathogenicity of these variants as biallelic hypomorphic mutations, establishing DNA2 as an MPD disease gene.

Identifiants

pubmed: 31045292
doi: 10.1002/humu.23776
pmc: PMC6773220
doi:

Substances chimiques

DNA Helicases EC 3.6.4.-
DNA2 protein, human EC 3.6.4.12

Types de publication

Case Reports Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1063-1070

Subventions

Organisme : Wellcome Trust
ID : WT098051
Pays : United Kingdom
Organisme : Medical Research Council
ID : MC_UU_00007/5
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/M02122X/1
Pays : United Kingdom
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Medical Research Council
ID : U127580972
Pays : United Kingdom

Informations de copyright

© 2019 The Authors. Human Mutation Published by Wiley Periodicals, Inc.

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Auteurs

Žygimantė Tarnauskaitė (Ž)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

Louise S Bicknell (LS)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

Joseph A Marsh (JA)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

Jennie E Murray (JE)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

David A Parry (DA)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

Clare V Logan (CV)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

Michael B Bober (MB)

Division of Genetics, Department of Pediatrics, Nemours/Alfred I. duPont Hospital for Children, Wilmington, Delaware.

Deepthi C de Silva (DC)

Department of Physiology, Faculty of Medicine, University of Kelaniya, Colombo, Sri Lanka.

Angela L Duker (AL)

Division of Genetics, Department of Pediatrics, Nemours/Alfred I. duPont Hospital for Children, Wilmington, Delaware.

David Sillence (D)

Discipline of Genomic Medicine, Faculty of Medicine and Health, University of Sydney, Sydney, Australia.
Western Sydney Genetics Program, Sydney Children's Hospitals Network, Westmead, Australia.

Carol Wise (C)

Sarah M. and Charles E. Seay Center for Musculoskeletal Research, Texas Scottish, Rite Hospital for Children, Dallas, Texas.
McDermott Center for Human Growth and Development, University of Texas, Southwestern Medical Center, Dallas, Texas.
Department of Orthopaedic Surgery, University of Texas Southwestern Medical Center, Dallas, Texas.
Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, Texas.

Andrew P Jackson (AP)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

Olga Murina (O)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

Martin A M Reijns (MAM)

MRC Human Genetics Unit, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.

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