The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery.
16S rDNA
DNA extraction method
ITS rDNA
fungal microbiota
gut microbiome
gut microbiota
gut mycobiome
gut mycobiota
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2019
2019
Historique:
received:
26
10
2018
accepted:
01
04
2019
entrez:
7
5
2019
pubmed:
7
5
2019
medline:
7
5
2019
Statut:
epublish
Résumé
Our understanding of human gut microbiota in health and disease depends on accurate and reproducible microbial data acquisition. The critical step in this process is to apply an appropriate methodology to extract microbial DNA, since biases introduced during the DNA extraction process may result in inaccurate microbial representation. In this study, we attempted to find a DNA extraction protocol which could be effectively used to analyze both the bacterial and fungal community. We evaluated the effect of five DNA extraction methods (QIAamp DNA Stool Mini Kit, PureLink
Identifiants
pubmed: 31057522
doi: 10.3389/fmicb.2019.00821
pmc: PMC6479168
doi:
Types de publication
Journal Article
Langues
eng
Pagination
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