Convergence of theory and experiment on the role of preorganization, quantum tunneling and enzyme motions into flavoenzyme-catalyzed hydride transfer.

Hydride transfer Kinetic Isotope Effects Morphinone Reductase QM/MM molecular dynamics

Journal

ACS catalysis
ISSN: 2155-5435
Titre abrégé: ACS Catal
Pays: United States
ID NLM: 101562209

Informations de publication

Date de publication:
15 May 2019
Historique:
entrez: 4 6 2019
pubmed: 4 6 2019
medline: 4 6 2019
Statut: ppublish

Résumé

Hydride transfer is one of the most common reactions catalyzed by enzymatic systems and it has become an object of study due to possible significant quantum tunneling effects. In the present work, we provide a combination of theoretical QM/MM simulations and experimental measurements of the rate constants and kinetic isotopic effects (KIEs) for the hydride transfer reaction catalyzed by morphinone reductase, MR. Quantum mechanical tunneling coefficients, computed in the framework of variational transition-state theory, play a significant role in this reaction, reaching values of 23.8 ± 5.5 for the lightest isotopologue; one of the largest values reported for enzymatic systems. This prediction is supported by the agreement between the theoretically predicted rate constants and the corresponding experimental values. Simulations indicate that the role of protein motions can be satisfactorily described as equilibrium fluctuations along the reaction coordinate, in line with a high degree of preorganization displayed by this enzyme.

Identifiants

pubmed: 31157122
doi: 10.1021/acscatal.7b00201
pmc: PMC6542656
mid: EMS82896
doi:

Types de publication

Journal Article

Langues

eng

Pagination

3190-3198

Subventions

Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/H021523/1
Pays : United Kingdom

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Auteurs

Manuel Delgado (M)

Department of Physical and Analytical Chemistry, University Jaume I, 12071, Castelló de la Plana, Spain.

Stefan Görlich (S)

Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, United Kingdom.

James E Longbotham (JE)

Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, United Kingdom.

Nigel S Scrutton (NS)

Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, United Kingdom.

Sam Hay (S)

Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, United Kingdom.

Vicent Moliner (V)

Department of Physical and Analytical Chemistry, University Jaume I, 12071, Castelló de la Plana, Spain.
Department of Chemistry, University of Bath, Bath BA2 7AY, United Kingdom.

Iñaki Tuñón (I)

Department of Physical Chemistry, University of València, 46100, Burjassot, Spain.

Classifications MeSH