Effect of Geographic Isolation on the Nasal Virome of Indigenous Children.
Colombia
children
metagenomics
nasal virome
next-generation sequencing
papillomavirus
rhinovirus
Journal
Journal of virology
ISSN: 1098-5514
Titre abrégé: J Virol
Pays: United States
ID NLM: 0113724
Informations de publication
Date de publication:
01 09 2019
01 09 2019
Historique:
received:
25
04
2019
accepted:
29
05
2019
pubmed:
14
6
2019
medline:
3
6
2020
entrez:
14
6
2019
Statut:
epublish
Résumé
The influence of living in small remote villages on the diversity of viruses in the nasal mucosa was investigated in three Colombian villages with very different levels of geographic isolation. Metagenomic analysis was used to characterize viral nucleic acids in nasal swabs from 63 apparently healthy young children. Sequences from human virus members of the families
Identifiants
pubmed: 31189707
pii: JVI.00681-19
doi: 10.1128/JVI.00681-19
pmc: PMC6694818
pii:
doi:
Types de publication
Journal Article
Multicenter Study
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : NIAID NIH HHS
ID : HHSN272201400006C
Pays : United States
Informations de copyright
Copyright © 2019 American Society for Microbiology.
Références
J Virol. 2012 Oct;86(19):10321-6
pubmed: 22740408
PLoS One. 2012;7(11):e50937
pubmed: 23226428
Cell. 2013 Nov 21;155(5):1178-87
pubmed: 24267896
J Gen Virol. 2012 Jul;93(Pt 7):1573-1582
pubmed: 22495233
BMC Infect Dis. 2018 Oct 29;18(1):537
pubmed: 30373528
PLoS One. 2012;7(2):e30875
pubmed: 22355331
PLoS One. 2012;7(11):e49449
pubmed: 23166671
Science. 1975 Feb 14;187(4176):515-8
pubmed: 163483
J Med Virol. 2010 Jul;82(7):1282-90
pubmed: 20513097
J Infect Dis. 2017 May 1;215(9):1407-1415
pubmed: 28368491
J Am Coll Dent. 2014 Summer;81(3):4-13
pubmed: 25951677
Annu Rev Pathol. 2019 Jan 24;14:319-338
pubmed: 30355154
J Gen Virol. 2012 Feb;93(Pt 2):341-346
pubmed: 22031527
AIDS. 2001 Mar 30;15(5):563-70
pubmed: 11316992
Clin Microbiol Infect. 2017 Aug;23(8):574.e1-574.e6
pubmed: 28192237
Nat Commun. 2018 Oct 15;9(1):4270
pubmed: 30323210
Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):20444-8
pubmed: 22143784
Vet Pathol. 2018 May;55(3):434-441
pubmed: 29421972
BMC Biol. 2014 Sep 10;12:71
pubmed: 25212266
Clin Infect Dis. 2019 May 17;68(11):1847-1855
pubmed: 30239621
Arch Virol. 2019 Feb;164(2):601-605
pubmed: 30488237
J Med Virol. 2017 Dec;89(12):2098-2107
pubmed: 28671295
Nat Microbiol. 2019 Apr;4(4):663-674
pubmed: 30742071
Pediatr Transplant. 2018 Feb;22(1):
pubmed: 29082660
Science. 2008 Feb 22;319(5866):1096-100
pubmed: 18202256
Sci Rep. 2015 Sep 10;5:14032
pubmed: 26354026
PLoS One. 2017 May 23;12(5):e0177340
pubmed: 28542207
J Clin Microbiol. 2016 Apr;54(4):1000-7
pubmed: 26818672
Nucleic Acids Res. 2015 Apr 20;43(7):e46
pubmed: 25586223
PLoS One. 2011 Feb 28;6(2):e17035
pubmed: 21386965
J Virol Methods. 2015 Mar;213:139-46
pubmed: 25497414
Vet Microbiol. 2014 Nov 7;174(1-2):1-8
pubmed: 25263495
J Virol. 2019 Aug 13;93(17):
pubmed: 31189707
Am J Transplant. 2015 Jan;15(1):200-9
pubmed: 25403800
Front Cell Infect Microbiol. 2018 Sep 19;8:334
pubmed: 30283747
Mol Biol Evol. 2013 Dec;30(12):2725-9
pubmed: 24132122
Dig Dis Sci. 2001 Nov;46(11):2401-7
pubmed: 11713943
PLoS One. 2011 Mar 29;6(3):e17780
pubmed: 21479259
Pediatr Allergy Immunol. 2003 Oct;14(5):363-70
pubmed: 14641606
Virology. 2013 Feb 20;436(2):295-303
pubmed: 23276405
J Clin Virol. 2001 May;21(2):135-41
pubmed: 11378494
J Med Virol. 2007 Jan;79(1):1-7
pubmed: 17133553
J Infect Dis. 2011 Dec 1;204(11):1702-10
pubmed: 22013207
J Virol. 2013 Oct;87(19):10912-5
pubmed: 23903845
J Virol. 2009 May;83(9):4642-51
pubmed: 19211756
Arch Pathol Lab Med. 2017 Jun;141(6):776-786
pubmed: 28169558
J Clin Microbiol. 2011 Oct;49(10):3463-9
pubmed: 21813714
J Infect Dis. 2000 May;181(5):1796-9
pubmed: 10823787