Profound analgesia is associated with a truncated peptide resulting from tissue specific alternative splicing of DRG CA8-204 regulated by an exon-level cis-eQTL.
Alternative Splicing
/ genetics
Animals
Biomarkers, Tumor
/ genetics
Calcium Signaling
/ genetics
Cerebellum
/ drug effects
Ganglia, Spinal
/ metabolism
Gene Transfer Techniques
HEK293 Cells
Humans
Inositol 1,4,5-Trisphosphate Receptors
/ genetics
Mice
Mutation
/ genetics
Neurons
/ metabolism
Organ Specificity
Pain
/ genetics
Peptides
/ genetics
Quantitative Trait Loci
/ genetics
RNA Splice Sites
/ genetics
Sciatic Nerve
/ drug effects
Journal
PLoS genetics
ISSN: 1553-7404
Titre abrégé: PLoS Genet
Pays: United States
ID NLM: 101239074
Informations de publication
Date de publication:
06 2019
06 2019
Historique:
received:
05
11
2018
accepted:
31
05
2019
revised:
09
07
2019
pubmed:
15
6
2019
medline:
7
11
2019
entrez:
15
6
2019
Statut:
epublish
Résumé
Carbonic anhydrase-8 (CA8) is an intracellular protein that functions as an allosteric inhibitor of inositol trisphosphate receptor-1 (ITPR1) critical to intracellular Ca++ release, synaptic functions and neuronal excitability. We showed previously that murine nociception and analgesic responses are regulated by the expression of this gene in dorsal root ganglion (DRG) associated with a cis-eQTL. In this report, we identify an exon-level cis-eQTL (rs6471859) that regulates human DRG CA8 alternative splicing, producing a truncated 1,697bp transcript (e.g., CA8-204). Our functional genomic studies show the "G" allele at rs6471859 produces a cryptic 3'UTR splice site regulating expression of CA8-204. We developed constructs to study the expression and function of the naturally occurring CA8-204G transcript (G allele at rs6471859), CA8-204C (C allele at rs6471859 reversion mutation) and CA8-201 (full length transcript). CA8-204G transcript expression occurred predominantly in non-neuronal cells (HEK293), while CA8-204C expression was restricted to neuronal derived cells (NBL) in vitro. CA8-204G produced a stable truncated transcript in HEK293 cells that was barely detectable in NBL cells. We also show CA8-204 produces a stable peptide that inhibits pITPR1 and Ca++ release in HEK293 cells. These results imply homozygous G/G individuals at rs6471859, which are common in the general population, produce exclusively CA8-204G that is barely detectable in neuronal cells. CA8 null mutations that greatly impact neuronal functions are associated with severe forms of spinal cerebellar ataxia, and our data suggest G/G homozygotes should display a similar phenotype. To address this question, we show in vivo using AAV8-FLAG-CA8-204G and AAV8-V5-CA8-201 gene transfer delivered via intra-neural sciatic nerve injection (SN), that these viral constructs are able to transduce DRG cells and produce similar analgesic and anti-hyperalgesic responses to inflammatory pain. Immunohistochemistry (IHC) examinations of DRG tissues further show CA8-204G peptide is expressed in advillin expressing neuronal cells, but to a lesser extent compared to glial cells. These findings explain why G/G homozygotes that exclusively produce this truncated functional peptide in DRG evade a severe phenotype. These genomic studies significantly advance the literature regarding structure-function studies on CA8-ITPR1 critical to calcium signaling pathways, synaptic functioning, neuronal excitability and analgesic responses.
Identifiants
pubmed: 31199789
doi: 10.1371/journal.pgen.1008226
pii: PGENETICS-D-18-02122
pmc: PMC6615631
doi:
Substances chimiques
Biomarkers, Tumor
0
ITPR1 protein, human
0
Inositol 1,4,5-Trisphosphate Receptors
0
Peptides
0
RNA Splice Sites
0
CA8 protein, human
EC 4.2.1.1
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e1008226Subventions
Organisme : NIDCR NIH HHS
ID : R01 DE022903
Pays : United States
Organisme : NINDS NIH HHS
ID : R21 NS105880
Pays : United States
Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
Références
Nucleic Acids Res. 2017 Dec 1;45(21):12214-12240
pubmed: 28981879
Neural Plast. 2017;2017:2480689
pubmed: 28951789
J Biol Chem. 2003 Feb 7;278(6):4048-56
pubmed: 12444087
BMC Genomics. 2007 Feb 26;8:59
pubmed: 17324281
Biochem J. 2003 Jun 1;372(Pt 2):435-41
pubmed: 12611586
Cell Rep. 2018 Apr 3;23(1):282-296.e4
pubmed: 29617667
PLoS Genet. 2009 May;5(5):e1000487
pubmed: 19461874
Nature. 2008 Nov 27;456(7221):470-6
pubmed: 18978772
Biochim Biophys Acta. 2012 Jul;1822(7):1109-13
pubmed: 22426302
J Biol Chem. 2003 Mar 21;278(12):10602-12
pubmed: 12525476
Physiol Rev. 2007 Apr;87(2):593-658
pubmed: 17429043
Nucleic Acids Res. 2011 Aug;39(14):5837-44
pubmed: 21470962
Trends Biochem Sci. 2013 Jun;38(6):312-20
pubmed: 23632313
Nature. 1993 Jan 28;361(6410):315-25
pubmed: 8381210
Nucleic Acids Res. 2009 May;37(9):e67
pubmed: 19339519
Cerebellum Ataxias. 2017 Feb 23;4:3
pubmed: 28250961
PLoS One. 2015 Mar 03;10(3):e0118273
pubmed: 25734498
Gene Ther. 2018 Jul;25(4):297-311
pubmed: 29789638
J Neurosci Res. 2017 Jun;95(6):1271-1281
pubmed: 27452349
Neuron. 2009 Oct 15;64(1):46-54
pubmed: 19840548
J Biol Chem. 2001 Jun 29;276(26):24153-9
pubmed: 11309393
J Biol Chem. 2003 Aug 29;278(35):33492-500
pubmed: 12766172
Genome Res. 2014 Nov;24(11):1774-86
pubmed: 25258385
J Biol Chem. 2009 Jan 2;284(1):372-80
pubmed: 18990696
Mol Ther Nucleic Acids. 2018 Jun 1;11:91-102
pubmed: 29858094
Mol Cell Neurosci. 2007 May;35(1):161-70
pubmed: 17376701
PLoS Biol. 2005 Nov;3(11):e374
pubmed: 16231974
Cell. 2003 Sep 19;114(6):777-89
pubmed: 14505576
Mol Ther Methods Clin Dev. 2016 Aug 03;3:16052
pubmed: 27525291
Neuroreport. 2017 Dec 13;28(18):1215-1220
pubmed: 28902707
RNA. 2004 May;10(5):757-65
pubmed: 15100430
Biochim Biophys Acta. 2009 Jan;1792(1):14-26
pubmed: 18992329
AFCS Nat Mol Pages. 2008;2008:
pubmed: 26023301
Nat Rev Neurosci. 2005 Sep;6(9):671-82
pubmed: 16136171
Cell Rep. 2017 May 30;19(9):1940-1952
pubmed: 28564610
PLoS One. 2014 Mar 07;9(3):e91050
pubmed: 24608243
Hum Mol Genet. 2015 Dec 15;24(24):6910-20
pubmed: 26395459
BMC Genomics. 2019 Feb 19;20(1):147
pubmed: 30782122
Mamm Genome. 2017 Oct;28(9-10):407-415
pubmed: 28547032
Brain. 2012 Mar;135(Pt 3):833-46
pubmed: 22252998
Pain. 1983 Jun;16(2):109-10
pubmed: 6877845