Comparison of the Clinical Sensitivity of the Idylla Platform and the OncoBEAM RAS CRC Assay for KRAS Mutation Detection in Liquid Biopsy Samples.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
20 06 2019
Historique:
received: 28 02 2019
accepted: 07 06 2019
entrez: 22 6 2019
pubmed: 22 6 2019
medline: 22 10 2020
Statut: epublish

Résumé

KRAS mutations are common in colorectal cancer (CRC). In this setting, mutation status determination in circulating-free DNA from blood samples (liquid biopsy) has been shown to be a viable alternative to tissue testing. The objective of this study was to compare the sensitivity of two liquid biopsy methods for detecting KRAS mutations in plasma samples from metastatic CRC patients. Samples with a positive (KRAS-MUT+) result and a mutant allelic fraction (MAF) < 5% according to the OncoBEAM RAS CRC assay were pairly analyzed by the Idylla ctKRAS Mutation Test (n = 116). In a cohort of 71 patients with at least 1 year of follow-up, the progression-free survival (PFS) was determined according to MAF values. Idylla detected KRAS mutations in 81/116 OncoBEAM KRAS-MUT+ samples with MAF < 5% and in 48/79 samples with MAF < 1%. Concordance between OncoBEAM and Idylla significantly improved at higher MAF values. PFS rates at 6 and 12 months tended to be lower in patients with MAF levels between 1% and 5% than in those with levels <1%. OncoBEAM demonstrated greater sensitivity for plasma detection of KRAS mutations than Idylla. Importantly, our data identified a "gray zone" below 1% MAF where Idylla showed reduced KRAS mutation detection, highlighting the importance of an accurate method to provide the mutational status of CRC patients.

Identifiants

pubmed: 31222012
doi: 10.1038/s41598-019-45616-y
pii: 10.1038/s41598-019-45616-y
pmc: PMC6586620
doi:

Substances chimiques

Biomarkers, Tumor 0
Cell-Free Nucleic Acids 0
KRAS protein, human 0
Proto-Oncogene Proteins p21(ras) EC 3.6.5.2

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

8976

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Auteurs

Ana Vivancos (A)

Cancer Genomics Group, Vall d'Hebron Institute of Oncology, Barcelona, Spain. avivancos@vhio.net.

Enrique Aranda (E)

Department of Medical Oncology, Reina Sofía University Hospital, CIBERONC, Córdoba, Spain.

Manuel Benavides (M)

Department of Medical Oncology, Hospital Universitario Regional y Virgen de la Victoria, Málaga, Spain.

Elena Élez (E)

Department of Medical Oncology Vall d'Hebron Institute of Oncology (CIBERONC), Barcelona, Spain.

Maria Auxiliadora Gómez-España (MA)

Department of Medical Oncology, Reina Sofía University Hospital, CIBERONC, Córdoba, Spain.

Marta Toledano (M)

IMIBIC Instituto Maimonides Investigación Biomédica de Córdoba, Córdoba, Spain.

Martina Alvarez (M)

Laboratorio de Biología Molecular del Cáncer. Centro de Investigaciones Médico Sanitarias, Universidad de Málaga, Málaga, Spain.

Maria Rosario Chica Parrado (MRC)

Laboratorio de Biología Molecular del Cáncer. Centro de Investigaciones Médico Sanitarias, Universidad de Málaga, Málaga, Spain.

Vanesa García-Barberán (V)

Laboratorio de Investigación Traslacional, IdISSC, Hospital Clínico San Carlos, CIBERONC, Madrid, Spain.

Eduardo Diaz-Rubio (E)

Laboratorio de Investigación Traslacional, IdISSC, Hospital Clínico San Carlos, CIBERONC, Madrid, Spain.

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Classifications MeSH