CombLabel: rational design of optimized sequence-specific combinatorial labeling schemes. Application to backbone assignment of membrane proteins with low stability.

Amino Acid Sequence Humans Membrane Proteins / chemistry NAV1.4 Voltage-Gated Sodium Channel / chemistry Nuclear Magnetic Resonance, Biomolecular / methods Proof of Concept Study Protein Binding Protein Domains Software Staining and Labeling Time Factors
Backbone resonance assignment Cell-free expression Combinatorial selective isotope labeling NMR spectroscopy Na+ channel

Journal

Journal of biomolecular NMR
ISSN: 1573-5001
Titre abrégé: J Biomol NMR
Pays: Netherlands
ID NLM: 9110829

Informations de publication

Date de publication:
Nov 2019
Historique:
received: 13 11 2018
accepted: 19 06 2019
pubmed: 10 7 2019
medline: 16 4 2020
entrez: 9 7 2019
Statut: ppublish

Résumé

Assignment of backbone resonances is a necessary initial step in every protein NMR investigation. Standard assignment procedure is based on the set of 3D triple-resonance (

Identifiants

DOI: 10.1007/s10858-019-00259-z PMID: 31281943
pubmed: 31281943
doi: 10.1007/s10858-019-00259-z
pii: 10.1007/s10858-019-00259-z
doi:

Substances chimiques

Membrane Proteins 0
NAV1.4 Voltage-Gated Sodium Channel 0
SCN4A protein, human 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

531-544

Subventions

Organisme : Russian Science Foundation
ID : 16-14-10338
Organisme : Russian Foundation for Basic Research
ID : 16-34-01309
Organisme : Russian Academy of Sciences
ID : Molecular and Cell Biology Program

Références

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Auteurs

M Yu Myshkin (MY)

Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997. mikhail.myshkin@phystech.edu.
Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701. mikhail.myshkin@phystech.edu.

M A Dubinnyi (MA)

Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.
Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701.

D S Kulbatskii (DS)

Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.
Lomonosov Moscow State University, Leninskie Gory 1, Moscow, Russia, 119991.

E N Lyukmanova (EN)

Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.
Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701.
Lomonosov Moscow State University, Leninskie Gory 1, Moscow, Russia, 119991.

M P Kirpichnikov (MP)

Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997.
Lomonosov Moscow State University, Leninskie Gory 1, Moscow, Russia, 119991.

Z O Shenkarev (ZO)

Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho-Maklaya str., 16/10, Moscow, Russia, 117997. zakhar.shenkarev@nmr.ru.
Moscow Institute of Physics and Technology (State University), Institutskiy Pereulok 9, Dolgoprudny, Moscow Region, Russia, 141701. zakhar.shenkarev@nmr.ru.
ORCID: 0000-0003-1383-3522

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Classifications MeSH

questionsmedicales.fr › Sciences de l'information › Sources d'information › Services d'information › Documentation › Données de séquences moléculaires › Séquence d'acides aminés › CombLabel: rational design of optimized...
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Primates › Haplorhini › Catarrhini › Hominidae › Humains › CombLabel: rational design of optimized...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines membranaires › CombLabel: rational design of optimized...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines membranaires › Protéines de transport membranaire › Canaux ioniques › Canaux sodiques › Canal sodique voltage-dépendant NAV1.4 › CombLabel: rational design of optimized...
questionsmedicales.fr › Techniques d'investigation › Techniques de chimie analytique › Analyse spectrale › Spectroscopie par résonance magnétique › Résonance magnétique nucléaire biomoléculaire › CombLabel: rational design of optimized...
questionsmedicales.fr › Disciplines des sciences naturelles › Science › Recherche › Étude de validation de principe › CombLabel: rational design of optimized...
questionsmedicales.fr › Métabolisme › Liaison aux protéines › CombLabel: rational design of optimized...
questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Conformation moléculaire › Conformation des protéines › Structure tertiaire des protéines › Domaines protéiques › CombLabel: rational design of optimized...
questionsmedicales.fr › Sciences de l'information › Méthodologies informatiques › Logiciel › CombLabel: rational design of optimized...
questionsmedicales.fr › Techniques d'investigation › Techniques de laboratoire clinique › Techniques histologiques › Techniques de préparation histocytologique › Coloration et marquage › CombLabel: rational design of optimized...
questionsmedicales.fr › Phénomènes physiques › Temps › Facteurs temps › CombLabel: rational design of optimized...