Rotavirus-associated acute diarrhea outbreak in West Shewa Zone of Oromia Regional State, Ethiopia, 2017.
Acute Disease
Adolescent
Adult
Child
Child, Preschool
Diarrhea
/ epidemiology
Disease Outbreaks
Ethiopia
/ epidemiology
Feces
/ virology
Female
Genotype
Humans
Immunoenzyme Techniques
/ methods
Infant
Infant, Newborn
Male
Middle Aged
Reverse Transcriptase Polymerase Chain Reaction
Rotavirus
/ genetics
Rotavirus Infections
/ epidemiology
Rotavirus Vaccines
/ administration & dosage
Vaccination Coverage
/ statistics & numerical data
Young Adult
Ethiopia
Rotavirus
diarrhea
genotype
outbreak
vaccine
Journal
The Pan African medical journal
ISSN: 1937-8688
Titre abrégé: Pan Afr Med J
Pays: Uganda
ID NLM: 101517926
Informations de publication
Date de publication:
2019
2019
Historique:
received:
17
01
2019
accepted:
07
03
2019
entrez:
18
7
2019
pubmed:
18
7
2019
medline:
25
7
2019
Statut:
epublish
Résumé
Rotavirus causes severe-diarrheal diseases in infants. An estimation of 138 million rotavirus-associated diarrheal cases and 215,000 deaths occur every year globally. In December 2016, West-Shewa zone in Ethiopia reported unidentified gastrointestinal diarrhea outbreak. We investigated to identify the causative agent of the outbreak to support response operations. Medical records were reviewed, and the daily line list was collected from health facilities. Descriptive data analysis was done by time, person and place. Stool specimens were first tested by antigen capture enzyme immunoassay (EIA) technique and further confirmed by reverse-transcription polymerase chain reaction (RT-PCR) as a gold standard. The product of RT-PCR was genotyped for each gene using G1-G4, G8-G9 and G12 primers for VP7 gene and P(4), P(6), P(8) and P(14) primers for VP4 gene. A total of 1,987 diarrheal cases (5.7 per 1000) and five deaths (case-fatality rate 0.25%) were identified and epidemiologically-linked to confirmed rotavirus from December 2016 to February 2017. Among the cases, 1,946 (98%) were < 5 children. Fourteen (74%) of the 19 tested stool specimens were positive for rotavirus by EIA and RT-PCR. Majority of strains detected were G12P(6) (25%) and G-negative P(8) (25%) followed by G9P(8) (19%), G1P(8) (13%) and G3/G2 P(8), G12P(8), and G-negative P(6) (6% each). Diarrheal outbreak which occurred in West-Shewa zone of Ethiopia was associated with rotavirus and relatively more affected districts with low vaccination coverage. Routine rotavirus vaccination quality and coverage should be evaluated and the surveillance system needs to be strengthened to detect, prevent and control a similar outbreak.
Identifiants
pubmed: 31312314
doi: 10.11604/pamj.2019.32.202.18188
pii: PAMJ-32-202
pmc: PMC6620077
doi:
Substances chimiques
Rotavirus Vaccines
0
Types de publication
Journal Article
Langues
eng
Pagination
202Déclaration de conflit d'intérêts
All Authors declared no competing interests.
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