Neonatal Diet Impacts Bioregional Microbiota Composition in Piglets Fed Human Breast Milk or Infant Formula.


Journal

The Journal of nutrition
ISSN: 1541-6100
Titre abrégé: J Nutr
Pays: United States
ID NLM: 0404243

Informations de publication

Date de publication:
01 12 2019
Historique:
received: 19 03 2019
revised: 07 05 2019
accepted: 26 06 2019
pubmed: 3 8 2019
medline: 16 7 2020
entrez: 3 8 2019
Statut: ppublish

Résumé

Early infant diet influences postnatal gut microbial development, which in turn can modulate the developing immune system. The aim of this study was to characterize diet-specific bioregional microbiota differences in piglets fed either human breast milk (HM) or infant formula. Male piglets (White Dutch Landrace Duroc) were raised on HM or cow milk formula (MF) from postnatal day (PND) 2 to PND 21 and weaned to an ad libitum diet until PND 51. Piglets were euthanized on either PND 21 or PND 51, and the gastrointestinal contents were collected for 16s RNA sequencing. Data were analyzed using the Quantitative Insight into Microbial Ecology. Diversity measurements (Chao1 and Shannon) and the Wald test were used to determine relative abundance. At PND 21, the ileal luminal region of HM-fed piglets showed lower Chao1 operational taxonomic unit diversity, while Shannon diversity was lower in cecal, proximal colon (PC), and distal colon (DC) luminal regions, relative to MF-fed piglets. In addition, at PND 51, the HM-fed piglets had lower genera diversity within the jejunum, ileum, PC, and DC luminal regions, relative to MF-fed piglets. At PND 21, Turicibacter was 4- to 5-fold lower in the HM-fed piglets' ileal, cecal, PC, and DC luminal regions, relative to the MF-fed piglets. Campylobacter is 3- to 6-fold higher in HM-fed piglets duodenal, ileal, cecal, PC, and DC luminal regions, in comparison to MF-fed piglets. Furthermore, the large intestine (cecum, PC, and rectum) luminal region of HM-fed piglets showed 4- to 7-fold higher genera that belong to class Bacteroidia, in comparison to MF-fed piglets at PND 21. In addition, at PND 51 distal colon lumen of HM-fed piglets showed 1.5-fold higher genera from class Bacteroidia than the MF-fed piglets. In the large intestinal regions (cecum, PC, and rectum), MF diet alters microbiota composition, relative to HM diet, with sustained effects after weaning from the neonatal diet. These microbiota changes could impact immune system and health outcomes later in life.

Sections du résumé

BACKGROUND
Early infant diet influences postnatal gut microbial development, which in turn can modulate the developing immune system.
OBJECTIVES
The aim of this study was to characterize diet-specific bioregional microbiota differences in piglets fed either human breast milk (HM) or infant formula.
METHODS
Male piglets (White Dutch Landrace Duroc) were raised on HM or cow milk formula (MF) from postnatal day (PND) 2 to PND 21 and weaned to an ad libitum diet until PND 51. Piglets were euthanized on either PND 21 or PND 51, and the gastrointestinal contents were collected for 16s RNA sequencing. Data were analyzed using the Quantitative Insight into Microbial Ecology. Diversity measurements (Chao1 and Shannon) and the Wald test were used to determine relative abundance.
RESULTS
At PND 21, the ileal luminal region of HM-fed piglets showed lower Chao1 operational taxonomic unit diversity, while Shannon diversity was lower in cecal, proximal colon (PC), and distal colon (DC) luminal regions, relative to MF-fed piglets. In addition, at PND 51, the HM-fed piglets had lower genera diversity within the jejunum, ileum, PC, and DC luminal regions, relative to MF-fed piglets. At PND 21, Turicibacter was 4- to 5-fold lower in the HM-fed piglets' ileal, cecal, PC, and DC luminal regions, relative to the MF-fed piglets. Campylobacter is 3- to 6-fold higher in HM-fed piglets duodenal, ileal, cecal, PC, and DC luminal regions, in comparison to MF-fed piglets. Furthermore, the large intestine (cecum, PC, and rectum) luminal region of HM-fed piglets showed 4- to 7-fold higher genera that belong to class Bacteroidia, in comparison to MF-fed piglets at PND 21. In addition, at PND 51 distal colon lumen of HM-fed piglets showed 1.5-fold higher genera from class Bacteroidia than the MF-fed piglets.
CONCLUSIONS
In the large intestinal regions (cecum, PC, and rectum), MF diet alters microbiota composition, relative to HM diet, with sustained effects after weaning from the neonatal diet. These microbiota changes could impact immune system and health outcomes later in life.

Identifiants

pubmed: 31373372
pii: S0022-3166(22)16504-1
doi: 10.1093/jn/nxz170
pmc: PMC6888031
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

2236-2246

Subventions

Organisme : NIGMS NIH HHS
ID : P20 GM121293
Pays : United States

Informations de copyright

Copyright © American Society for Nutrition 2019.

Références

Semin Neonatol. 2002 Aug;7(4):275-81
pubmed: 12401297
Environ Microbiol. 2016 Jul;18(7):2185-95
pubmed: 26626365
J Pediatr Gastroenterol Nutr. 2016 Dec;63(6):688-697
pubmed: 27031373
Immunity. 2015 Sep 15;43(3):541-53
pubmed: 26320660
Sci Rep. 2019 Feb 21;9(1):2434
pubmed: 30792412
Genome Biol. 2012 Apr 30;13(4):r32
pubmed: 22546241
Nutr Res Rev. 2013 Dec;26(2):191-209
pubmed: 24134811
J Pediatr. 1995 Feb;126(2):191-7
pubmed: 7844664
CMAJ. 2013 Mar 19;185(5):385-94
pubmed: 23401405
Environ Microbiol. 2006 Apr;8(4):755-8
pubmed: 16584487
Appl Environ Microbiol. 2013 Sep;79(17):5112-20
pubmed: 23793624
Bioinformatics. 2018 Mar 15;34(6):1050-1052
pubmed: 29087435
Microbiome. 2015 Apr 10;3:13
pubmed: 25922665
J Anim Sci Biotechnol. 2018 Jul 30;9:54
pubmed: 30069307
Gut Microbes. 2017 Mar 4;8(2):143-171
pubmed: 28068209
J Immunol. 2011 Jul 15;187(2):733-47
pubmed: 21666057
Nature. 2019 May;569(7754):126-130
pubmed: 30988509
Acta Physiol (Oxf). 2019 Sep;227(1):e13285
pubmed: 31004464
Int J Mol Sci. 2019 Feb 18;20(4):
pubmed: 30781601
Nestle Nutr Inst Workshop Ser. 2019;90:163-174
pubmed: 30865984
PLoS One. 2013;8(2):e56710
pubmed: 23468874
Pediatrics. 2014 Aug;134(2):e362-72
pubmed: 25002669
Front Cell Infect Microbiol. 2015 Feb 05;5:3
pubmed: 25705611
Genome Biol. 2014;15(12):550
pubmed: 25516281
J Nutr. 2012 Apr;142(4):681-9
pubmed: 22399522
J Pediatr Gastroenterol Nutr. 2015 Jun;60(6):825-33
pubmed: 25651488
Sci Rep. 2018 Aug 24;8(1):12727
pubmed: 30143657
Adv Nutr. 2012 May 01;3(3):450S-5S
pubmed: 22585924
BJOG. 2016 May;123(6):983-93
pubmed: 26412384
Anaerobe. 2011 Dec;17(6):478-82
pubmed: 21497661
Neonatology. 2007;91(4):248-55
pubmed: 17565226
Autophagy. 2016;12(1):1-222
pubmed: 26799652
Clin Exp Allergy. 2014 Jun;44(6):842-50
pubmed: 24330256
Allergy. 2015 Feb;70(2):241-4
pubmed: 25413686
Minerva Pediatr. 2008 Jun;60(3):327-35
pubmed: 18487978
Front Pediatr. 2018 Apr 20;6:91
pubmed: 29732363
Glycobiology. 2012 Sep;22(9):1147-62
pubmed: 22513036
J Nutr. 2017 Aug;147(8):1499-1509
pubmed: 28659406
Br J Nutr. 2016 Feb 28;115(4):605-18
pubmed: 26653138
Science. 2018 May 18;360(6390):795-800
pubmed: 29724905
Ann Allergy Asthma Immunol. 2003 Jun;90(6 Suppl 3):59-63
pubmed: 12839115
Proteomes. 2019 Jan 10;7(1):
pubmed: 30634649
Front Pediatr. 2018 Sep 10;6:239
pubmed: 30250836
J Nutr. 2018 Nov 1;148(11):1860-1870
pubmed: 30247686
PLoS One. 2012;7(8):e44595
pubmed: 22957008
mSphere. 2017 Dec 6;2(6):
pubmed: 29242832
Mucosal Immunol. 2016 Mar;9(2):468-78
pubmed: 26329428
Microbiology. 2011 May;157(Pt 5):1385-1392
pubmed: 21330436
J Nutr. 2013 Jun;143(6):795-803
pubmed: 23616518
Arch Pediatr. 1996;3 Suppl 1:126s-127s
pubmed: 8795989
Acta Paediatr Scand. 1985 Sep;74(5):641-2
pubmed: 4050410
J Pediatr Gastroenterol Nutr. 2012 Jun;54(6):812-6
pubmed: 22228076
Microbiome. 2018 Feb 20;6(1):36
pubmed: 29458413
J Nutr. 2017 Jun;147(6):1041-1047
pubmed: 28490677
FEMS Microbiol Ecol. 2014 Jan;87(1):280-90
pubmed: 24112053
PLoS Comput Biol. 2014 Apr 03;10(4):e1003531
pubmed: 24699258
PLoS One. 2010 Aug 27;5(8):e12459
pubmed: 20805981
J Pediatr Gastroenterol Nutr. 1995 Nov;21(4):387-93
pubmed: 8583289
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
Nat Rev Immunol. 2014 Oct;14(10):667-85
pubmed: 25234148
J Microbiol Biotechnol. 2014 Feb 28;24(2):133-43
pubmed: 24169452
Cell Rep. 2017 Aug 8;20(6):1269-1277
pubmed: 28793252
World Rev Nutr Diet. 1992;67:40-113
pubmed: 1557912
BMC Gastroenterol. 2016 Mar 22;16:40
pubmed: 27005303

Auteurs

Lauren R Brink (LR)

Arkansas Children's Nutrition Center, Little Rock, AR, USA.
Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.

Katelin Matazel (K)

Arkansas Children's Nutrition Center, Little Rock, AR, USA.
Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Arkansas Children's Research Institute, Little Rock, AR, USA.

Brian D Piccolo (BD)

Arkansas Children's Nutrition Center, Little Rock, AR, USA.
Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.

Anne K Bowlin (AK)

Arkansas Children's Nutrition Center, Little Rock, AR, USA.
Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Arkansas Children's Research Institute, Little Rock, AR, USA.

Sree V Chintapalli (SV)

Arkansas Children's Nutrition Center, Little Rock, AR, USA.
Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.

Kartik Shankar (K)

Arkansas Children's Nutrition Center, Little Rock, AR, USA.
Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.

Laxmi Yeruva (L)

Arkansas Children's Nutrition Center, Little Rock, AR, USA.
Department of Pediatrics, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Arkansas Children's Research Institute, Little Rock, AR, USA.

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