Identifying Diabetes in Clinical Notes in Hebrew: A Novel Text Classification Approach Based on Word Embedding.


Journal

Studies in health technology and informatics
ISSN: 1879-8365
Titre abrégé: Stud Health Technol Inform
Pays: Netherlands
ID NLM: 9214582

Informations de publication

Date de publication:
21 Aug 2019
Historique:
entrez: 24 8 2019
pubmed: 24 8 2019
medline: 12 9 2019
Statut: ppublish

Résumé

NimbleMiner is a word embedding-based, language-agnostic natural language processing system for clinical text classification. Previously, NimbleMiner was applied in English and this study applied NimbleMiner on a large sample of inpatient clinical notes in Hebrew to identify instances of diabetes mellitus. The study data included 521,278 clinical notes (one admission and one discharge note per patient) for 268,664 hospital admissions to medical-surgical units of a large hospital in Israel. NimbleMiner achieved overall good performance (F-score =.94) when tested on a gold standard human annotated dataset of 800 clinical notes. We found 15% more patients with diabetes mentioned in the clinical notes compared with diagnoses data. Our findings about underreporting of diabetes in the coded diagnoses data highlight the urgent need for tools and algorithms that will help busy providers identify a range of useful information, like having a diabetes.

Identifiants

pubmed: 31437952
pii: SHTI190250
doi: 10.3233/SHTI190250
doi:

Types de publication

Journal Article

Langues

eng

Pagination

393-397

Auteurs

Maxim Topaz (M)

School of Nursing & Data Science Institute, Columbia University, New York City, NY, USA.
Visiting Nurse Service of New York, New York City, NY, USA.

Ludmila Murga (L)

Cheryl Spencer Department of Nursing, University of Haifa, Haifa, Israel.

Chagai Grossman (C)

Sheba Medical Center, Tel Hashomer, Israel.

Daniella Daliyot (D)

Sheba Medical Center, Tel Hashomer, Israel.

Shlomit Jacobson (S)

Sheba Medical Center, Tel Hashomer, Israel.

Noa Rozendorn (N)

Sheba Medical Center, Tel Hashomer, Israel.

Eyal Zimlichman (E)

Sheba Medical Center, Tel Hashomer, Israel.

Nadav Furie (N)

Sheba Medical Center, Tel Hashomer, Israel.

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