Ontology-Driven Real World Evidence Extraction from Clinical Narratives.

Data Warehousing Italy Narration Natural Language Processing
Biomedical Ontologies Data Warehousing Natural Language Processing

Journal

Studies in health technology and informatics
ISSN: 1879-8365
Titre abrégé: Stud Health Technol Inform
Pays: Netherlands
ID NLM: 9214582

Informations de publication

Date de publication:
21 Aug 2019
Historique:
entrez: 24 8 2019
pubmed: 24 8 2019
medline: 4 9 2019
Statut: ppublish

Résumé

Unstructured clinical notes contain a huge amount of information. We investigated the possibility of harvesting such information through an NLP-based approach. A manually curated ontology is the only resource required to handle all the steps of the process leading from clinical narrative to a structured data warehouse (i2b2). We have tested our approach at the Papa Giovanni XXIII hospital in Bergamo (Italy) on pathology reports collected since 2008.

Identifiants

DOI: 10.3233/SHTI190474 PMID: 31438171
pubmed: 31438171
pii: SHTI190474
doi: 10.3233/SHTI190474
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1441-1442

Auteurs

L Chiudinelli (L)

Laboratory for Biomedical Informatics "Mario Stefanelli", University of Pavia, Italy.
Hospital "ASST Papa Giovanni XXIII", Bergamo, Italy.

M Gabetta (M)

BIOMERIS (BIOMEdical Research Informatics Solutions), Pavia, Italy.

G Centorrino (G)

BIOMERIS (BIOMEdical Research Informatics Solutions), Pavia, Italy.

N Viani (N)

Laboratory for Biomedical Informatics "Mario Stefanelli", University of Pavia, Italy.
Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.

C Tasca (C)

Hospital "ASST Papa Giovanni XXIII", Bergamo, Italy.

A Zambelli (A)

Hospital "ASST Papa Giovanni XXIII", Bergamo, Italy.

M Bucalo (M)

BIOMERIS (BIOMEdical Research Informatics Solutions), Pavia, Italy.

A Ghirardi (A)

Hospital "ASST Papa Giovanni XXIII", Bergamo, Italy.

N Barbarini (N)

BIOMERIS (BIOMEdical Research Informatics Solutions), Pavia, Italy.

E Sfreddo (E)

Hospital "ASST Papa Giovanni XXIII", Bergamo, Italy.

C Tondini (C)

Hospital "ASST Papa Giovanni XXIII", Bergamo, Italy.

R Bellazzi (R)

Laboratory for Biomedical Informatics "Mario Stefanelli", University of Pavia, Italy.

L Sacchi (L)

Laboratory for Biomedical Informatics "Mario Stefanelli", University of Pavia, Italy.

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Classifications MeSH

questionsmedicales.fr › Sciences de l'information › Mémorisation et recherche des informations › Entreposage de données › Ontology-Driven Real World Evidence Extraction...
questionsmedicales.fr › Régions géographiques › Europe › Italie › Ontology-Driven Real World Evidence Extraction...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Collecte de données › Narration › Ontology-Driven Real World Evidence Extraction...
questionsmedicales.fr › Sciences de l'information › Méthodologies informatiques › Algorithmes › Intelligence artificielle › Traitement du langage naturel › Ontology-Driven Real World Evidence Extraction...