Unique Sjögren's syndrome patient subsets defined by molecular features.
Adult
Antibodies, Antinuclear
/ immunology
Autoantibodies
/ immunology
B-Cell Activating Factor
/ genetics
Chemokine CXCL10
/ genetics
Chemokine CXCL13
/ genetics
Chemokine CXCL9
/ genetics
Cytokines
/ genetics
Enzyme-Linked Immunosorbent Assay
Female
Gene Expression
Gene Regulatory Networks
Humans
Inflammation
/ genetics
Interferons
/ genetics
Interleukin-1alpha
/ genetics
Interleukins
/ genetics
Male
Middle Aged
Models, Statistical
Phenotype
Sjogren's Syndrome
/ classification
Tumor Necrosis Factor Ligand Superfamily Member 14
/ genetics
Sjögren’s syndrome
biomarkers
interferon
precision medicine
Journal
Rheumatology (Oxford, England)
ISSN: 1462-0332
Titre abrégé: Rheumatology (Oxford)
Pays: England
ID NLM: 100883501
Informations de publication
Date de publication:
01 04 2020
01 04 2020
Historique:
received:
12
11
2018
revised:
23
06
2019
pubmed:
10
9
2019
medline:
22
8
2020
entrez:
10
9
2019
Statut:
ppublish
Résumé
To address heterogeneity complicating primary SS (pSS) clinical trials, research and care by characterizing and clustering patients by their molecular phenotypes. pSS patients met American-European Consensus Group classification criteria and had at least one systemic manifestation and stimulated salivary flow of ⩾0.1 ml/min. Correlated transcriptional modules were derived from gene expression microarray data from blood (n = 47 with appropriate samples). Patients were clustered based on this molecular information using an unbiased random forest modelling approach. In addition, multiplex, bead-based assays and ELISAs were used to assess 30 serum cytokines, chemokines and soluble receptors. Eleven autoantibodies, including anti-Ro/SSA and anti-La/SSB, were measured by Bio-Rad Bioplex 2200. Transcriptional modules distinguished three clusters of pSS patients. Cluster 1 showed no significant elevation of IFN or inflammation modules. Cluster 2 showed strong IFN and inflammation modular network signatures, as well as high plasma protein levels of IP-10/CXCL10, MIG/CXCL9, BLyS (BAFF) and LIGHT. Cluster 3 samples exhibited moderately elevated IFN modules, but with suppressed inflammatory modules, increased IP-10/CXCL10 and B cell-attracting chemokine 1/CXCL13 and trends toward increased MIG/CXCL9, IL-1α, and IL-21. Anti-Ro/SSA and anti-La/SSB were present in all three clusters. Molecular profiles encompassing IFN, inflammation and other signatures can be used to separate patients with pSS into distinct clusters. In the future, such profiles may inform patient selection for clinical trials and guide treatment decisions.
Identifiants
pubmed: 31497844
pii: 5565247
doi: 10.1093/rheumatology/kez335
pmc: PMC7188221
doi:
Substances chimiques
Antibodies, Antinuclear
0
Autoantibodies
0
B-Cell Activating Factor
0
CXCL10 protein, human
0
CXCL13 protein, human
0
CXCL9 protein, human
0
Chemokine CXCL10
0
Chemokine CXCL13
0
Chemokine CXCL9
0
Cytokines
0
IL1A protein, human
0
Interleukin-1alpha
0
Interleukins
0
SS-A antibodies
0
SS-B antibodies
0
TNFSF13B protein, human
0
TNFSF14 protein, human
0
Tumor Necrosis Factor Ligand Superfamily Member 14
0
Interferons
9008-11-1
interleukin-21
MKM3CA6LT1
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
860-868Subventions
Organisme : NIGMS NIH HHS
ID : U54 GM104938
Pays : United States
Organisme : NIAMS NIH HHS
ID : P30 AR053483
Pays : United States
Organisme : NIAID NIH HHS
ID : UM1 AI144292
Pays : United States
Organisme : NIAID NIH HHS
ID : UM2 AI117870
Pays : United States
Organisme : NIDCR NIH HHS
ID : R01 DE012354
Pays : United States
Organisme : NIAMS NIH HHS
ID : P30 AR073750
Pays : United States
Organisme : NIAID NIH HHS
ID : UM1 AI110503
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI082715
Pays : United States
Organisme : NIAID NIH HHS
ID : HHSN272200900057C
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI082714
Pays : United States
Organisme : NIGMS NIH HHS
ID : P30 GM103510
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI056363
Pays : United States
Organisme : NIAID NIH HHS
ID : U01 AI101934
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI110491
Pays : United States
Informations de copyright
© The Author(s) 2019. Published by Oxford University Press on behalf of the British Society for Rheumatology. All rights reserved. For permissions, please email: journals.permissions@oup.com.
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