Unique Sjögren's syndrome patient subsets defined by molecular features.


Journal

Rheumatology (Oxford, England)
ISSN: 1462-0332
Titre abrégé: Rheumatology (Oxford)
Pays: England
ID NLM: 100883501

Informations de publication

Date de publication:
01 04 2020
Historique:
received: 12 11 2018
revised: 23 06 2019
pubmed: 10 9 2019
medline: 22 8 2020
entrez: 10 9 2019
Statut: ppublish

Résumé

To address heterogeneity complicating primary SS (pSS) clinical trials, research and care by characterizing and clustering patients by their molecular phenotypes. pSS patients met American-European Consensus Group classification criteria and had at least one systemic manifestation and stimulated salivary flow of ⩾0.1 ml/min. Correlated transcriptional modules were derived from gene expression microarray data from blood (n = 47 with appropriate samples). Patients were clustered based on this molecular information using an unbiased random forest modelling approach. In addition, multiplex, bead-based assays and ELISAs were used to assess 30 serum cytokines, chemokines and soluble receptors. Eleven autoantibodies, including anti-Ro/SSA and anti-La/SSB, were measured by Bio-Rad Bioplex 2200. Transcriptional modules distinguished three clusters of pSS patients. Cluster 1 showed no significant elevation of IFN or inflammation modules. Cluster 2 showed strong IFN and inflammation modular network signatures, as well as high plasma protein levels of IP-10/CXCL10, MIG/CXCL9, BLyS (BAFF) and LIGHT. Cluster 3 samples exhibited moderately elevated IFN modules, but with suppressed inflammatory modules, increased IP-10/CXCL10 and B cell-attracting chemokine 1/CXCL13 and trends toward increased MIG/CXCL9, IL-1α, and IL-21. Anti-Ro/SSA and anti-La/SSB were present in all three clusters. Molecular profiles encompassing IFN, inflammation and other signatures can be used to separate patients with pSS into distinct clusters. In the future, such profiles may inform patient selection for clinical trials and guide treatment decisions.

Identifiants

pubmed: 31497844
pii: 5565247
doi: 10.1093/rheumatology/kez335
pmc: PMC7188221
doi:

Substances chimiques

Antibodies, Antinuclear 0
Autoantibodies 0
B-Cell Activating Factor 0
CXCL10 protein, human 0
CXCL13 protein, human 0
CXCL9 protein, human 0
Chemokine CXCL10 0
Chemokine CXCL13 0
Chemokine CXCL9 0
Cytokines 0
IL1A protein, human 0
Interleukin-1alpha 0
Interleukins 0
SS-A antibodies 0
SS-B antibodies 0
TNFSF13B protein, human 0
TNFSF14 protein, human 0
Tumor Necrosis Factor Ligand Superfamily Member 14 0
Interferons 9008-11-1
interleukin-21 MKM3CA6LT1

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

860-868

Subventions

Organisme : NIGMS NIH HHS
ID : U54 GM104938
Pays : United States
Organisme : NIAMS NIH HHS
ID : P30 AR053483
Pays : United States
Organisme : NIAID NIH HHS
ID : UM1 AI144292
Pays : United States
Organisme : NIAID NIH HHS
ID : UM2 AI117870
Pays : United States
Organisme : NIDCR NIH HHS
ID : R01 DE012354
Pays : United States
Organisme : NIAMS NIH HHS
ID : P30 AR073750
Pays : United States
Organisme : NIAID NIH HHS
ID : UM1 AI110503
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI082715
Pays : United States
Organisme : NIAID NIH HHS
ID : HHSN272200900057C
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI082714
Pays : United States
Organisme : NIGMS NIH HHS
ID : P30 GM103510
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI056363
Pays : United States
Organisme : NIAID NIH HHS
ID : U01 AI101934
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI110491
Pays : United States

Informations de copyright

© The Author(s) 2019. Published by Oxford University Press on behalf of the British Society for Rheumatology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

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Auteurs

Judith A James (JA)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.
Department of Medicine.
Department of Pathology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.

Joel M Guthridge (JM)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.
Department of Medicine.

Hua Chen (H)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Rufei Lu (R)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.
Department of Medicine.

Rebecka L Bourn (RL)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Krista Bean (K)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Melissa E Munroe (ME)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Miles Smith (M)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Eliza Chakravarty (E)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Alan N Baer (AN)

Division of Rheumatology, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.

Ghaith Noaiseh (G)

Division of Rheumatology and Clinical Immunology, Department of Medicine, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.

Ann Parke (A)

Division of Rheumatic Diseases, University of Connecticut, Farmington, CT, USA.

Karen Boyle (K)

Rho Federal Systems Division, Chapel Hill, NC, USA.

Lynette Keyes-Elstein (L)

Rho Federal Systems Division, Chapel Hill, NC, USA.

Andreea Coca (A)

Department of Medicine, University of Rochester Medical Center, Rochester, NY, USA.

Tammy Utset (T)

Department of Medicine, University of Chicago, Chicago, IL, USA.

Mark C Genovese (MC)

Immunology and Rheumatology, Stanford University School of Medicine, Stanford, CA, USA.

Virginia Pascual (V)

Drukier Institute for Children's Health, Weill Cornell Medicine, New York, NY, USA.

Paul J Utz (PJ)

Immunology and Rheumatology, Stanford University School of Medicine, Stanford, CA, USA.

V Michael Holers (VM)

Division of Rheumatology, University of Colorado School of Medicine, Aurora,CO, USA.

Kevin D Deane (KD)

Division of Rheumatology, University of Colorado School of Medicine, Aurora,CO, USA.

Kathy L Sivils (KL)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Teresa Aberle (T)

Arthritis and Clinical Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA.

Daniel J Wallace (DJ)

Department of Medicine, Cedars-Sinai Medical Center, West Hollywood, CA, USA.

James McNamara (J)

Division of Allergy, Immunology, and Transplantation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.

Nathalie Franchimont (N)

Biogen, Cambridge, MA, USA.

E William St Clair (EW)

Division of Rheumatology and Immunology, Department of Medicine, Duke University School of Medicine, Durham, NC, USA.

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