Structural basis for activation of a diguanylate cyclase required for bacterial predation in Bdellovibrio.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
09 09 2019
Historique:
received: 28 09 2018
accepted: 13 08 2019
entrez: 11 9 2019
pubmed: 11 9 2019
medline: 19 12 2019
Statut: epublish

Résumé

The bacterial second messenger cyclic-di-GMP is a widespread, prominent effector of lifestyle change. An example of this occurs in the predatory bacterium Bdellovibrio bacteriovorus, which cycles between free-living and intraperiplasmic phases after entering (and killing) another bacterium. The initiation of prey invasion is governed by DgcB (GGDEF enzyme) that produces cyclic-di-GMP in response to an unknown stimulus. Here, we report the structure of DgcB, and demonstrate that the GGDEF and sensory forkhead-associated (FHA) domains form an asymmetric dimer. Our structures indicate that the FHA domain is a consensus phosphopeptide sensor, and that the ligand for activation is surprisingly derived from the N-terminal region of DgcB itself. We confirm this hypothesis by determining the structure of a FHA:phosphopeptide complex, from which we design a constitutively-active mutant (confirmed via enzyme assays). Our results provide an understanding of the stimulus driving DgcB-mediated prey invasion and detail a unique mechanism of GGDEF enzyme regulation.

Identifiants

pubmed: 31501441
doi: 10.1038/s41467-019-12051-6
pii: 10.1038/s41467-019-12051-6
pmc: PMC6733907
doi:

Substances chimiques

Bacterial Proteins 0
Escherichia coli Proteins 0
Ligands 0
Mutant Proteins 0
Phosphopeptides 0
Phosphorus-Oxygen Lyases EC 4.6.-
diguanylate cyclase EC 4.6.1.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

4086

Subventions

Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/N011945/1
Pays : United Kingdom
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/S010122/1
Pays : United Kingdom

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Auteurs

Richard W Meek (RW)

Institute for Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK.

Ian T Cadby (IT)

Institute for Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK.

Patrick J Moynihan (PJ)

Institute for Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK.

Andrew L Lovering (AL)

Institute for Microbiology and Infection, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK. a.lovering@bham.ac.uk.

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Classifications MeSH