Computational and experimental analysis of the glycophosphatidylinositol-anchored proteome of the human parasitic nematode Brugia malayi.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2019
Historique:
received: 26 04 2019
accepted: 20 08 2019
entrez: 13 9 2019
pubmed: 13 9 2019
medline: 10 3 2020
Statut: epublish

Résumé

Further characterization of essential systems in the parasitic filarial nematode Brugia malayi is needed to better understand its biology, its interaction with its hosts, and to identify critical components that can be exploited to develop novel treatments. The production of glycophosphatidylinositol-anchored proteins (GPI-APs) is essential for eukaryotic cellular and physiological function. In addition, GPI-APs perform many important roles for cells. In this study, we characterized the B. malayi GPI-anchored proteome using both computational and experimental approaches. We used bioinformatic strategies to show the presence or absence of B. malayi GPI-AP biosynthetic pathway genes and to compile a putative B. malayi GPI-AP proteome using available prediction programs. We verified these in silico analyses using proteomics to identify GPI-AP candidates prepared from the surface of intact worms and from membrane enriched extracts. Our study represents the first description of the GPI-anchored proteome in B. malayi and lays the groundwork for further exploration of this essential protein modification as a target for novel anthelmintic therapeutic strategies.

Identifiants

pubmed: 31513600
doi: 10.1371/journal.pone.0216849
pii: PONE-D-19-11928
pmc: PMC6742230
doi:

Substances chimiques

GPI-Linked Proteins 0
Helminth Proteins 0
Proteome 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0216849

Déclaration de conflit d'intérêts

FBM, LKC, ANL, CMM, CIR, CHT, JMF have received funding and were employed by New England Biolabs at the time that work was done. LC is now an employee of Scholar Rock. This affiliation does not alter our adherence to all the PLOS ONE's policies on sharing data and materials.

Références

Biochemistry. 2008 Jul 8;47(27):6991-7000
pubmed: 18557633
PLoS Negl Trop Dis. 2011 Mar 29;5(3):e998
pubmed: 21468315
Proc Natl Acad Sci U S A. 2011 Jun 7;108(23):9649-54
pubmed: 21606368
Mol Cell Proteomics. 2006 Jul;5(7):1286-99
pubmed: 16603573
Plant Cell. 2005 Apr;17(4):1128-40
pubmed: 15772281
Mol Biochem Parasitol. 1987 Dec;26(3):257-65
pubmed: 3123928
Nucleic Acids Res. 2017 Jan 4;45(D1):D158-D169
pubmed: 27899622
J Biochem. 1997 Aug;122(2):251-7
pubmed: 9378699
PLoS Negl Trop Dis. 2008;2(10):e326
pubmed: 18958170
J Proteomics. 2011 Feb 1;74(2):242-53
pubmed: 21070894
Proteomics. 2014 Nov;14(21-22):2471-84
pubmed: 25262930
Proc Natl Acad Sci U S A. 1987 Nov;84(22):7817-21
pubmed: 3479767
PLoS Negl Trop Dis. 2016 Apr 05;10(4):e0004586
pubmed: 27045170
J Mol Biol. 1999 Sep 24;292(3):741-58
pubmed: 10497036
Biochem J. 1976 Jan 15;154(1):203-8
pubmed: 1275908
Biochem J. 1977 Oct 1;167(1):281-4
pubmed: 588258
Yeast. 1997 Dec;13(15):1477-89
pubmed: 9434352
PLoS One. 2014 Jan 29;9(1):e87673
pubmed: 24489949
FEBS J. 2005 Oct;272(20):5101-9
pubmed: 16218944
Mol Biol Cell. 2012 Mar;23(6):982-95
pubmed: 22298425
Clin Vaccine Immunol. 2017 Nov 6;24(11):
pubmed: 28877929
Bioinformatics. 2005 May 1;21(9):1846-52
pubmed: 15691858
Am J Trop Med Hyg. 2005 Aug;73(2):234-8
pubmed: 16103581
Mol Cell Proteomics. 2014 Oct;13(10):2673-86
pubmed: 25038065
Lab Invest. 1999 Mar;79(3):293-9
pubmed: 10092065
Korean J Parasitol. 2009 Sep;47(3):197-204
pubmed: 19724691
FEBS Lett. 1986 Apr 21;199(2):182-6
pubmed: 2422055
Nat Methods. 2011 Sep 29;8(10):785-6
pubmed: 21959131
J Lipid Res. 2016 Jan;57(1):6-24
pubmed: 26563290
PLoS Negl Trop Dis. 2015 Sep 14;9(9):e0004054
pubmed: 26367142
J Biol Chem. 1998 Jan 23;273(4):2355-60
pubmed: 9442081
PLoS Biol. 2005 Oct;3(10):e312
pubmed: 16122351
IEEE Trans Vis Comput Graph. 2014 Dec;20(12):1983-92
pubmed: 26356912
Mol Biochem Parasitol. 2004 Oct;137(2):361-4
pubmed: 15383308
EMBO J. 2004 Nov 24;23(23):4701-8
pubmed: 15526036
ScientificWorldJournal. 2002 Jun 14;2:1638-42
pubmed: 12806153
N Engl J Med. 2018 Nov 8;379(19):1871-1872
pubmed: 30403953
J Biol Chem. 2004 Aug 20;279(34):36083-92
pubmed: 15208306
Proc Natl Acad Sci U S A. 1997 Jul 22;94(15):7873-8
pubmed: 9223280
Biochim Biophys Acta. 2007 Mar;1771(3):405-20
pubmed: 16859984
WormBook. 2006 Feb 11;:1-11
pubmed: 18050451
FEBS Lett. 2002 Feb 13;512(1-3):249-54
pubmed: 11852090
BMC Bioinformatics. 2008 Sep 23;9:392
pubmed: 18811934
Nucleic Acids Res. 2019 Jan 8;47(D1):D442-D450
pubmed: 30395289
PLoS Negl Trop Dis. 2018 Apr 16;12(4):e0006438
pubmed: 29659599
EMBO J. 2000 Jun 1;19(11):2475-82
pubmed: 10835346
J Mol Biol. 2001 Jan 19;305(3):567-80
pubmed: 11152613
Mol Biol Cell. 2005 Nov;16(11):5236-46
pubmed: 16162815
Nucleic Acids Res. 2016 Jan 4;44(D1):D279-85
pubmed: 26673716
Nucleic Acids Res. 2017 Jan 4;45(D1):D200-D203
pubmed: 27899674
N Engl J Med. 2018 Nov 8;379(19):1801-1810
pubmed: 30403937
Science. 1988 Feb 12;239(4841 Pt 1):753-9
pubmed: 3340856
Carbohydr Res. 2012 Nov 15;362:62-9
pubmed: 23085221
FEBS Lett. 1977 Oct 1;82(1):143-6
pubmed: 913568
Nucleic Acids Res. 2018 Jan 4;46(D1):D869-D874
pubmed: 29069413
J Lipid Res. 2007 May;48(5):993-1011
pubmed: 17361015
PLoS Genet. 2015 Mar 25;11(3):e1005082
pubmed: 25807459
WormBook. 2015 Jun 18;:1-31
pubmed: 26087236
Lancet. 2010 Oct 2;376(9747):1175-85
pubmed: 20739055
J Biol Chem. 1985 Nov 25;260(27):14547-55
pubmed: 4055788
J Cell Sci. 2008 Sep 15;121(Pt 18):3099-108
pubmed: 18768936
PLoS Negl Trop Dis. 2009;3(4):e410
pubmed: 19352421
Mol Syst Biol. 2009;5:261
pubmed: 19357640
FEBS Lett. 1999 Nov 12;461(1-2):63-7
pubmed: 10561497
Nucleic Acids Res. 2018 Jan 4;46(D1):D8-D13
pubmed: 29140470

Auteurs

Fana B Mersha (FB)

New England Biolabs, Ipswich MA, United States of America.

Leslie K Cortes (LK)

New England Biolabs, Ipswich MA, United States of America.

Ashley N Luck (AN)

New England Biolabs, Ipswich MA, United States of America.

Colleen M McClung (CM)

New England Biolabs, Ipswich MA, United States of America.

Cristian I Ruse (CI)

New England Biolabs, Ipswich MA, United States of America.

Christopher H Taron (CH)

New England Biolabs, Ipswich MA, United States of America.

Jeremy M Foster (JM)

New England Biolabs, Ipswich MA, United States of America.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH