Texture classification of MR images of the brain in ALS using M-CoHOG: A multi-center study.
Amyotrophic Lateral Sclerosis (ALS)
Biomarker
Co-occurrence histograms
Co-occurrence matrix
MRI
Oriented gradients
Texture analysis
Journal
Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
ISSN: 1879-0771
Titre abrégé: Comput Med Imaging Graph
Pays: United States
ID NLM: 8806104
Informations de publication
Date de publication:
01 2020
01 2020
Historique:
received:
04
05
2019
revised:
16
08
2019
accepted:
24
09
2019
pubmed:
2
12
2019
medline:
6
8
2021
entrez:
2
12
2019
Statut:
ppublish
Résumé
Gradient-based texture analysis methods have become popular in computer vision and image processing and has many applications including medical image analysis. This motivates us to develop a texture feature extraction method to discriminate Amyotrophic Lateral Sclerosis (ALS) patients from controls. But, the lack of data in ALS research is a major constraint and can be mitigated by using data from multiple centers. However, multi-center data gives some other challenges such as differing scanner parameters and variation in intensity of the medical images, which motivate the development of the proposed method. To investigate these challenges, we propose a gradient-based texture feature extraction method called Modified Co-occurrence Histograms of Oriented Gradients (M-CoHOG) to extract texture features from 2D Magnetic Resonance Images (MRI). We also propose a new feature-normalization technique before feeding the normalized M-CoHOG features into an ensemble of classifiers, which can accommodate for variation of data from different centers. ALS datasets from four different centers are used in the experiments. We analyze the classification accuracy of single center data as well as that arising from multiple centers. It is observed that the extracted texture features from downsampled images are more significant in distinguishing between patients and controls. Moreover, using an ensemble of classifiers shows improvement in classification accuracy over a single classifier in multi-center data. The proposed method outperforms the state-of-the-art methods by a significant margin.
Identifiants
pubmed: 31786374
pii: S0895-6111(19)30076-X
doi: 10.1016/j.compmedimag.2019.101659
pii:
doi:
Substances chimiques
Biomarkers
0
Types de publication
Journal Article
Multicenter Study
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
101659Subventions
Organisme : NIAMS NIH HHS
ID : F31 AR076874
Pays : United States
Informations de copyright
Copyright © 2019 Elsevier Ltd. All rights reserved.