Texture classification of MR images of the brain in ALS using M-CoHOG: A multi-center study.


Journal

Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
ISSN: 1879-0771
Titre abrégé: Comput Med Imaging Graph
Pays: United States
ID NLM: 8806104

Informations de publication

Date de publication:
01 2020
Historique:
received: 04 05 2019
revised: 16 08 2019
accepted: 24 09 2019
pubmed: 2 12 2019
medline: 6 8 2021
entrez: 2 12 2019
Statut: ppublish

Résumé

Gradient-based texture analysis methods have become popular in computer vision and image processing and has many applications including medical image analysis. This motivates us to develop a texture feature extraction method to discriminate Amyotrophic Lateral Sclerosis (ALS) patients from controls. But, the lack of data in ALS research is a major constraint and can be mitigated by using data from multiple centers. However, multi-center data gives some other challenges such as differing scanner parameters and variation in intensity of the medical images, which motivate the development of the proposed method. To investigate these challenges, we propose a gradient-based texture feature extraction method called Modified Co-occurrence Histograms of Oriented Gradients (M-CoHOG) to extract texture features from 2D Magnetic Resonance Images (MRI). We also propose a new feature-normalization technique before feeding the normalized M-CoHOG features into an ensemble of classifiers, which can accommodate for variation of data from different centers. ALS datasets from four different centers are used in the experiments. We analyze the classification accuracy of single center data as well as that arising from multiple centers. It is observed that the extracted texture features from downsampled images are more significant in distinguishing between patients and controls. Moreover, using an ensemble of classifiers shows improvement in classification accuracy over a single classifier in multi-center data. The proposed method outperforms the state-of-the-art methods by a significant margin.

Identifiants

pubmed: 31786374
pii: S0895-6111(19)30076-X
doi: 10.1016/j.compmedimag.2019.101659
pii:
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article Multicenter Study Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

101659

Subventions

Organisme : NIAMS NIH HHS
ID : F31 AR076874
Pays : United States

Informations de copyright

Copyright © 2019 Elsevier Ltd. All rights reserved.

Auteurs

G M Mashrur E Elahi (GMM)

Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada.

Sanjay Kalra (S)

Departments of Medicine (Neurology) and Computing Science, University of Alberta, Edmonton, Alberta, Canada.

Lorne Zinman (L)

Sunnybrook Health Sciences Centre, University of Toronto, Toronto, Ontario, Canada.

Angela Genge (A)

Montreal Neurological Institute and Hospital, McGill University, Montreal, Quebec, Canada.

Lawrence Korngut (L)

Department of Clinical Neurosciences, University of Calgary, Calgary, Alberta, Canada.

Yee-Hong Yang (YH)

Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada.

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