Centromere protein I (CENPI) is a candidate gene for X-linked steroid sensitive nephrotic syndrome.

Centromere protein I Mutation Steroid sensitive nephrotic syndrome Whole exome sequencing

Journal

Journal of nephrology
ISSN: 1724-6059
Titre abrégé: J Nephrol
Pays: Italy
ID NLM: 9012268

Informations de publication

Date de publication:
Aug 2020
Historique:
received: 24 09 2019
accepted: 21 12 2019
pubmed: 9 1 2020
medline: 3 8 2021
entrez: 9 1 2020
Statut: ppublish

Résumé

Individuals with proteinuria in association with hypoalbuminemia, edema, and hyperlipidemia are considered as having nephrotic syndrome (NS). NS is the most common kidney disease seen in the paediatric age group. NS is usually classified into steroid resistant nephrotic syndrome (SRNS) and steroid sensitive nephrotic syndrome (SSNS). More than 58 genes have been identified as a monogenic cause of SRNS, however, the genetic architecture of childhood SSNS remains poorly understood. Here in this study, we performed sequencing of 66 NS candidate genes followed by whole genome SNP genotyping and whole exome sequencing in SSNS families with multiple affected individuals. NS candidate genes sequencing did not identify any pathogenic variant in the known genes. Homozygosity mapping based on an autosomal recessive model failed to detect any shared loss of heterozygosity region in the genome. An unbiased and hypothesis-free exome data analysis identified a missense variant (c.383G>A; p.Arg128Gln) in the CENPI gene. Sanger sequencing of both parents, unaffected and affected individuals confirmed an X-linked inheritance pattern of the variant (c.383G>A) with SSNS phenotype. The variant (c.383G>A) is very rare and is potentially damaging. Collectively, these observations suggest that a specific pathogenic link between SSNS development and alteration in CENPI exists. However, human mutations in CENPI causing SSNS have not been reported hitherto. Identification of genetic defects underlying SSNS will help in understanding the precise aetiology of SSNS and improved management of children with NS.

Sections du résumé

BACKGROUND BACKGROUND
Individuals with proteinuria in association with hypoalbuminemia, edema, and hyperlipidemia are considered as having nephrotic syndrome (NS). NS is the most common kidney disease seen in the paediatric age group. NS is usually classified into steroid resistant nephrotic syndrome (SRNS) and steroid sensitive nephrotic syndrome (SSNS). More than 58 genes have been identified as a monogenic cause of SRNS, however, the genetic architecture of childhood SSNS remains poorly understood.
METHODS METHODS
Here in this study, we performed sequencing of 66 NS candidate genes followed by whole genome SNP genotyping and whole exome sequencing in SSNS families with multiple affected individuals.
RESULTS RESULTS
NS candidate genes sequencing did not identify any pathogenic variant in the known genes. Homozygosity mapping based on an autosomal recessive model failed to detect any shared loss of heterozygosity region in the genome. An unbiased and hypothesis-free exome data analysis identified a missense variant (c.383G>A; p.Arg128Gln) in the CENPI gene. Sanger sequencing of both parents, unaffected and affected individuals confirmed an X-linked inheritance pattern of the variant (c.383G>A) with SSNS phenotype. The variant (c.383G>A) is very rare and is potentially damaging.
CONCLUSION CONCLUSIONS
Collectively, these observations suggest that a specific pathogenic link between SSNS development and alteration in CENPI exists. However, human mutations in CENPI causing SSNS have not been reported hitherto. Identification of genetic defects underlying SSNS will help in understanding the precise aetiology of SSNS and improved management of children with NS.

Identifiants

pubmed: 31912435
doi: 10.1007/s40620-019-00692-1
pii: 10.1007/s40620-019-00692-1
doi:

Substances chimiques

CENPI protein, human 0
DNA-Binding Proteins 0
Steroids 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

763-769

Subventions

Organisme : King Abdulaziz City for Science and Technology
ID : 13‑MED2088‑05

Auteurs

Sulman Basit (S)

Center for Genetics and Inherited Diseases, Taibah University Almadinah Almunawwarah, Medina, 42318, Kingdom of Saudi Arabia. sbasit.phd@gmail.com.

Howaida Mohammed Al-Edressi (HM)

Department of Nephrology, Madinah Maternity and Children Hospital, Medina, 42319, Kingdom of Saudi Arabia.

Mona Hamza Sairafi (MH)

Department of Nephrology, Madinah Maternity and Children Hospital, Medina, 42319, Kingdom of Saudi Arabia.

Jamil Amjad Hashmi (JA)

Center for Genetics and Inherited Diseases, Taibah University Almadinah Almunawwarah, Medina, 42318, Kingdom of Saudi Arabia.

Essa Alharby (E)

Center for Genetics and Inherited Diseases, Taibah University Almadinah Almunawwarah, Medina, 42318, Kingdom of Saudi Arabia.

Ramzia Safar (R)

Department of Nephrology, Madinah Maternity and Children Hospital, Medina, 42319, Kingdom of Saudi Arabia.

Khushnooda Ramzan (K)

Department of Genetics, King Faisal Specialist Hospital and Research Centre, Riyadh, Kingdom of Saudi Arabia.

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Classifications MeSH