Serotype and clonal distribution dynamics of invasive pneumococcal strains after PCV13 introduction (2011-2016): Surveillance data from 23 sites in Catalonia, Spain.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2020
Historique:
received: 10 07 2019
accepted: 21 01 2020
entrez: 7 2 2020
pubmed: 7 2 2020
medline: 27 5 2020
Statut: epublish

Résumé

The objective of this study is to describe incidence and shifts of serotype and clonal distribution of invasive Streptococcus pneumoniae strains in four different age groups (<5 years, 5-17 years, 18-64 years and >65 years) during a period of intermediate PCV13 vaccination coverage (2011-2016) in Catalonia, Spain. We included all pneumococcal strains systematically sent to the Catalan support laboratory for molecular surveillance of invasive pneumococcal disease (IPD) located at Hospital Sant Joan de Deu, Barcelona. Two study periods were considered: 2011-13, early PCV13 vaccination period (EVP) and 2014-2016, late vaccination period (LVP). A total of 2142 strains were included in the study. Five years after intermediate introduction of PCV13 in our population, a significant decrease of overall incidence of IPD in children <5 years was observed (incidence rate ratio 0.5, 95% confidence interval 0.4-0.8). However, in seniors older than 65 years, a significant increase of overall incidence of IPD was observed (IRR 1.4, 95% CI 1.1-1.7). The contribution of PCV13 vaccine serotypes to IPD declined significantly in all age groups: from 59% to 38.1% in <5 years; 82.7% to 59% in 5-17 years, 47.8% to 34.1% in 18-64 years and 48.2% to 37% in >65 years. Results found when comparing both periods were consistent with IRRs observed year by year. In children <5 years, the three major serotypes detected were 1, 24F and 19A in EVP vs 24F, 14 and 10A in LVP. Among patients 5-17 years the first three serotypes were 1, 12F and 14 both in EVP and LVP. Among adults 18-64, the three major serotypes detected were 1, 12F and 8 vs 8, 12F and 3, respectively. Finally, in patients >65 years the most frequently isolated serotypes were 3, 19A and 7F vs 3, 14 and 12F, respectively. Regarding clonal complexes (CCs) expressing mainly PCV13 serotypes, significant decreases of the proportions of CC306, CC191 and CC320 were observed, while CC156 showed a significant increase. As for CCs expressing mostly non-PCV13 serotypes, significant increases in ST989, CC53 and CC404 were showed. Despite low vaccine coverage in our setting a significant decrease of incidence of IPD was observed in children younger than 5 years. The modest indirect protection against vaccine serotypes causing IPD in elderly indicate the need for the inclusion of more serotypes in future high-valent PCV and vaccinating old adults should be considered.

Sections du résumé

BACKGROUND
The objective of this study is to describe incidence and shifts of serotype and clonal distribution of invasive Streptococcus pneumoniae strains in four different age groups (<5 years, 5-17 years, 18-64 years and >65 years) during a period of intermediate PCV13 vaccination coverage (2011-2016) in Catalonia, Spain.
METHODS
We included all pneumococcal strains systematically sent to the Catalan support laboratory for molecular surveillance of invasive pneumococcal disease (IPD) located at Hospital Sant Joan de Deu, Barcelona. Two study periods were considered: 2011-13, early PCV13 vaccination period (EVP) and 2014-2016, late vaccination period (LVP).
RESULTS
A total of 2142 strains were included in the study. Five years after intermediate introduction of PCV13 in our population, a significant decrease of overall incidence of IPD in children <5 years was observed (incidence rate ratio 0.5, 95% confidence interval 0.4-0.8). However, in seniors older than 65 years, a significant increase of overall incidence of IPD was observed (IRR 1.4, 95% CI 1.1-1.7). The contribution of PCV13 vaccine serotypes to IPD declined significantly in all age groups: from 59% to 38.1% in <5 years; 82.7% to 59% in 5-17 years, 47.8% to 34.1% in 18-64 years and 48.2% to 37% in >65 years. Results found when comparing both periods were consistent with IRRs observed year by year. In children <5 years, the three major serotypes detected were 1, 24F and 19A in EVP vs 24F, 14 and 10A in LVP. Among patients 5-17 years the first three serotypes were 1, 12F and 14 both in EVP and LVP. Among adults 18-64, the three major serotypes detected were 1, 12F and 8 vs 8, 12F and 3, respectively. Finally, in patients >65 years the most frequently isolated serotypes were 3, 19A and 7F vs 3, 14 and 12F, respectively. Regarding clonal complexes (CCs) expressing mainly PCV13 serotypes, significant decreases of the proportions of CC306, CC191 and CC320 were observed, while CC156 showed a significant increase. As for CCs expressing mostly non-PCV13 serotypes, significant increases in ST989, CC53 and CC404 were showed.
CONCLUSIONS
Despite low vaccine coverage in our setting a significant decrease of incidence of IPD was observed in children younger than 5 years. The modest indirect protection against vaccine serotypes causing IPD in elderly indicate the need for the inclusion of more serotypes in future high-valent PCV and vaccinating old adults should be considered.

Identifiants

pubmed: 32027715
doi: 10.1371/journal.pone.0228612
pii: PONE-D-19-19376
pmc: PMC7004304
doi:

Substances chimiques

13-valent pneumococcal vaccine 0
Pneumococcal Vaccines 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0228612

Déclaration de conflit d'intérêts

Competing Interests: Fernando Moraga-Llop reports participation in expert meetings and symposiums organized by Pfizer and GSK. Carmen Muñoz-Almagro reports travel grants, participation in expert meetings and a research grant from Pfizer laboratories outside the submitted work. Magda Campins reports participation as an investigator in clinical trials from GSK and in expert meetings and symposiums organized by Pfizer and GSK. Juan José García-García reports participation in expert meetings from Pfizer. All other authors declare no competing interests.

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Auteurs

Guillermo Ludwig (G)

Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.

Selene Garcia-Garcia (S)

Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.

Miguel Lanaspa (M)

Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.

Pilar Ciruela (P)

CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Agencia de Salut Publica de Catalunya (ASPCAT), Generalitat de Catalunya, Barcelona, Spain.

Cristina Esteva (C)

Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.

Mariona Fernandez de Sevilla (M)

Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.

Alvaro Diaz-Conradi (A)

Hospital de Nens, Barcelona, Spain.

Carmina Marti (C)

Hospital General de Granollers, Granollers, Spain.

Montse Motje (M)

Hospital Universitari de Girona Dr. Josep Trueta, Girona, Spain.

Carme Galles (C)

Hospital Sant Jaume, Calella, Spain.

Montse Morta (M)

Hospital Sant Joan de Deu de Manresa, Barcelona, Spain.

Conchita Izquierdo (C)

Agencia de Salut Publica de Catalunya (ASPCAT), Generalitat de Catalunya, Barcelona, Spain.

Fernando Moraga-Llop (F)

Hospital Universitari Vall d'Hebron, Barcelona, Spain.

Magda Campins (M)

Hospital Universitari Vall d'Hebron, Barcelona, Spain.
Grup de Recerca en Epidemiologia i Salut Pública, Vall d'Hebron Institut de Recerca, Barcelona, Spain.

Luis Salleras (L)

CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Departament de Medicina, Universitat de Barcelona, Barcelona, Spain.

Mireia Jane (M)

CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Agencia de Salut Publica de Catalunya (ASPCAT), Generalitat de Catalunya, Barcelona, Spain.

Angela Dominguez (A)

CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Departament de Medicina, Universitat de Barcelona, Barcelona, Spain.

Juan Jose Garcia-Garcia (JJ)

Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.

Carmen Muñoz-Almagro (C)

Institut de Recerca Sant Joan de Deu, Hospital Sant Joan de Deu, Barcelona, Spain.
CIBER de Epidemiologia y Salud Publica (CIBERESP), Instituto de Salud Carlos III, Madrid, Spain.
Departament de Medicina, Universitat Internacional de Catalunya, Barcelona, Spain.

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