An
biocontrol
bioinoculant
natural products
Journal
Applied and environmental microbiology
ISSN: 1098-5336
Titre abrégé: Appl Environ Microbiol
Pays: United States
ID NLM: 7605801
Informations de publication
Date de publication:
01 04 2020
01 04 2020
Historique:
received:
17
12
2019
accepted:
11
02
2020
pubmed:
23
2
2020
medline:
21
10
2020
entrez:
23
2
2020
Statut:
epublish
Résumé
Huanglongbing (HLB) is a destructive citrus disease that is lethal to all commercial citrus plants, making it the most serious citrus disease and one of the most serious plant diseases. Because of the severity of HLB and the paucity of effective control measures, we structured this study to encompass the entirety of the citrus microbiome and the chemistries associated with that microbial community. We describe the spatial niche diversity of bacteria and fungi associated with citrus roots, stems, and leaves using traditional microbial culturing integrated with culture-independent methods. Using the culturable sector of the citrus microbiome, we created a microbial repository using a high-throughput bulk culturing and microbial identification pipeline. We integrated an
Identifiants
pubmed: 32086307
pii: AEM.02883-19
doi: 10.1128/AEM.02883-19
pmc: PMC7117939
pii:
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : NIH HHS
ID : S10 OD016290
Pays : United States
Informations de copyright
Copyright © 2020 Blacutt et al.
Références
Phytochemistry. 2004 Jul;65(14):2107-11
pubmed: 15279980
Mycologia. 2018 Jan-Feb;110(1):47-62
pubmed: 29863996
Stud Mycol. 2012 Jun 15;72(1):1-401
pubmed: 22815589
Nucleic Acids Res. 2016 Jan 4;44(D1):D7-19
pubmed: 26615191
Cell. 2018 Nov 1;175(4):973-983.e14
pubmed: 30388454
Int J Syst Evol Microbiol. 2014 Jul;64(Pt 7):2461-6
pubmed: 24786353
Phytopathology. 2019 Dec;109(12):2046-2054
pubmed: 31369360
Nat Commun. 2018 Nov 20;9(1):4894
pubmed: 30459421
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
Ann Agric Environ Med. 2016;23(1):6-29
pubmed: 27007514
Science. 2015 Aug 21;349(6250):860-4
pubmed: 26184915
ISME J. 2012 Feb;6(2):363-83
pubmed: 21796220
Phytopathology. 2018 Apr;108(4):424-435
pubmed: 28990481
New Phytol. 2016 Jan;209(2):798-811
pubmed: 26467257
Indian J Microbiol. 2011 Oct;51(4):430-44
pubmed: 23024404
Front Plant Sci. 2018 Jan 09;8:2223
pubmed: 29375600
J Appl Microbiol. 2011 Mar;110(3):746-56
pubmed: 21205105
PLoS One. 2013 Apr 22;8(4):e61217
pubmed: 23630581
FEMS Microbiol Ecol. 2017 May 1;93(5):
pubmed: 28430944
Appl Environ Microbiol. 2017 May 17;83(11):
pubmed: 28341678
Nat Methods. 2013 Oct;10(10):996-8
pubmed: 23955772
Front Microbiol. 2017 Dec 07;8:2415
pubmed: 29375487
J Eukaryot Microbiol. 1999 Jul-Aug;46(4):327-38
pubmed: 10461381
Appl Environ Microbiol. 2007 Aug;73(16):5261-7
pubmed: 17586664
Phytopathology. 2010 Dec;100(12):1330-9
pubmed: 20839963
Phytopathology. 2019 Jul;109(7):1092-1101
pubmed: 30998129
Annu Rev Phytopathol. 2017 Aug 4;55:451-482
pubmed: 28637377
J Org Chem. 2017 Oct 6;82(19):9946-9954
pubmed: 28853887
Bioinformatics. 2010 Oct 1;26(19):2460-1
pubmed: 20709691
Phytopathology. 2010 Jun;100(6):567-72
pubmed: 20465412
FEMS Microbiol Lett. 2013 Nov;348(1):1-10
pubmed: 23895412
Nat Rev Microbiol. 2012 Dec;10(12):828-40
pubmed: 23154261
Plant Dis. 2009 Apr;93(4):386-394
pubmed: 30764219
Phytopathology. 2009 Dec;99(12):1346-54
pubmed: 19900000
J Microbiol Methods. 2014 Oct;105:82-7
pubmed: 25034229
Mol Plant Microbe Interact. 2015 Oct;28(10):1117-29
pubmed: 26075828
Appl Environ Microbiol. 2010 Jun;76(11):3427-36
pubmed: 20382817
Genome Biol. 2013 Jun 25;14(6):209
pubmed: 23805896
Phytopathology. 2017 Jun;107(6):662-668
pubmed: 28398165
Nucleic Acids Res. 2014 Jan;42(Database issue):D633-42
pubmed: 24288368
J Food Sci. 2010 Mar;75(2):C199-207
pubmed: 20492226
Plant Mol Biol. 2016 Apr;90(6):575-87
pubmed: 26729479
Nature. 2019 Mar;567(7748):283
pubmed: 30890810
Phytopathology. 2017 Mar;107(3):256-263
pubmed: 27898265
Sensors (Basel). 2013 Oct 16;13(10):13969-77
pubmed: 24135990
Crit Rev Microbiol. 2018 Nov;44(6):759-778
pubmed: 30369284
Plant Dis. 2013 Feb;97(2):283
pubmed: 30722341
BMC Bioinformatics. 2014 Sep 25;15:317
pubmed: 25252611
Genome Announc. 2017 Apr 13;5(15):
pubmed: 28408682
Mol Ecol. 2013 Nov;22(21):5271-7
pubmed: 24112409
Mol Plant Microbe Interact. 2015 Mar;28(3):212-7
pubmed: 25514681
Nat Rev Gastroenterol Hepatol. 2017 Jan;14(1):3
pubmed: 27876768
Microbiome. 2017 Jan 17;5(1):2
pubmed: 28095877
Appl Environ Microbiol. 1995 Mar;61(3):1104-9
pubmed: 7793912
Mol Plant Microbe Interact. 2003 Nov;16(11):983-93
pubmed: 14601666
Appl Environ Microbiol. 2019 Oct 16;85(21):
pubmed: 31420343
Gene. 2018 Apr 5;649:14-22
pubmed: 29369787
FEMS Microbiol Rev. 2015 Nov;39(6):968-84
pubmed: 26109597
Microb Ecol. 2011 Aug;62(2):324-36
pubmed: 21360139
Plant Cell. 1996 Aug;8(8):1225-37
pubmed: 8776893
J Mol Biol. 1990 Oct 5;215(3):403-10
pubmed: 2231712
Mol Plant Microbe Interact. 2017 Mar;30(3):190-193
pubmed: 28051350
J Integr Plant Biol. 2016 Apr;58(4):373-87
pubmed: 26466921