Examining Tail and Headgroup Effects on Binary and Ternary Gel-Phase Lipid Bilayer Structure.


Journal

The journal of physical chemistry. B
ISSN: 1520-5207
Titre abrégé: J Phys Chem B
Pays: United States
ID NLM: 101157530

Informations de publication

Date de publication:
16 04 2020
Historique:
pubmed: 21 3 2020
medline: 15 5 2021
entrez: 21 3 2020
Statut: ppublish

Résumé

The structural properties of two- and three-component gel-phase bilayers were studied using molecular dynamics simulations. The bilayers contain distearoylphosphatidylcholine (DSPC) phospholipids mixed with alcohols and/or fatty acids of varying tail lengths, with carbon chain lengths of 12, 16, and 24 studied. Changes in both headgroup chemistry and tail length are found to affect the balance between steric repulsion and van der Waals attraction within the bilayers, manifesting in different bilayer structural properties. Lipid components are found to be located at different depths within the bilayer depending on both chain length and headgroup chemistry. The highest bilayer ordering and lowest area per tail are found in systems with medium-length tails. While longer tails can enhance van der Waals attractions, the increased tail-length asymmetry is found to induce disorder and reduce tail packing. Bulkier headgroups further increase steric repulsion, as reflected in increased component offsets and reduced tail packing. These findings help explain how bilayer composition affects the structure of gel-phase bilayers.

Identifiants

pubmed: 32196346
doi: 10.1021/acs.jpcb.0c00490
pmc: PMC9206213
mid: NIHMS1815847
doi:

Substances chimiques

Lipid Bilayers 0
Phosphatidylcholines 0
Phospholipids 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

3043-3053

Subventions

Organisme : NIAMS NIH HHS
ID : R01 AR072679
Pays : United States

Références

J Comput Chem. 2011 Jul 30;32(10):2319-27
pubmed: 21500218
Biophys J. 1993 Apr;64(4):1097-109
pubmed: 8494973
J Phys Chem Lett. 2019 Jul 18;10(14):3991-3997
pubmed: 31265306
J Comput Chem. 2008 Aug;29(11):1859-65
pubmed: 18351591
Chem Phys Lipids. 2015 May;188:61-7
pubmed: 25957868
J Comput Chem. 2010 Apr 30;31(6):1117-25
pubmed: 19827145
J Comput Chem. 2005 Dec;26(16):1701-18
pubmed: 16211538
J Chem Theory Comput. 2008 Mar;4(3):435-47
pubmed: 26620784
Soft Matter. 2018 Dec 19;15(1):78-93
pubmed: 30520494
Biochim Biophys Acta. 1997 Jul 5;1327(1):131-47
pubmed: 9247174
Biophys Chem. 2006 Jan 1;119(1):61-8
pubmed: 16223560
J Phys Chem B. 2015 Jul 16;119(28):8725-33
pubmed: 26109479
Biochim Biophys Acta. 2014 Mar;1841(3):295-313
pubmed: 24252189
J Pharmacol Exp Ther. 1981 Sep;218(3):669-75
pubmed: 7264950
Skin Pharmacol Physiol. 2007;20(4):175-86
pubmed: 17396052
Chem Rev. 2019 May 8;119(9):6227-6269
pubmed: 30785731
Bioinformatics. 2013 Apr 1;29(7):845-54
pubmed: 23407358
Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 2000 May;61(5 Pt B):5634-9
pubmed: 11031619
J Invest Dermatol. 2001 Sep;117(3):710-7
pubmed: 11564181
Biochemistry. 1995 Apr 11;34(14):4684-8
pubmed: 7718572
Phys Rev A Gen Phys. 1985 Mar;31(3):1695-1697
pubmed: 9895674
J Phys Chem B. 2016 Nov 17;120(45):11761-11772
pubmed: 27771953
Biophys J. 1989 Feb;55(2):315-25
pubmed: 2713445
Biophys J. 2006 Apr 15;90(8):2796-807
pubmed: 16443652
J Phys Chem B. 2018 Jul 5;122(26):6744-6754
pubmed: 29870257
J Phys Chem B. 1998 Apr 30;102(18):3586-616
pubmed: 24889800
Chem Phys Lipids. 2019 Jan;218:168-177
pubmed: 30593772
Langmuir. 2019 Sep 3;35(35):11463-11470
pubmed: 31407910
Biochim Biophys Acta. 2008 Jun;1778(6):1517-24
pubmed: 18406341
Biochim Biophys Acta Biomembr. 2018 Aug;1860(8):1489-1501
pubmed: 29709614
Int J Cosmet Sci. 2017 Apr;39(2):206-216
pubmed: 27614102
J Chem Theory Comput. 2008 Jan;4(1):116-22
pubmed: 26619985
Biophys J. 2015 Oct 20;109(8):1528-32
pubmed: 26488642
J Chem Phys. 2016 Jan 28;144(4):041103
pubmed: 26827195
J Phys Chem B. 2016 Dec 22;120(50):12863-12871
pubmed: 27957835
J Phys Chem Lett. 2011;2(13):1526-1532
pubmed: 21760975
J Phys Chem B. 2018 Mar 29;122(12):3113-3123
pubmed: 29504755
Biophys J. 1996 Aug;71(2):885-91
pubmed: 8842227
J Chem Theory Comput. 2013 Nov 12;9(11):5116-5126
pubmed: 24501589
Int J Cosmet Sci. 2012 Dec;34(6):567-74
pubmed: 22882126
J Chem Phys. 2019 Feb 14;150(6):064904
pubmed: 30769992
J Phys Chem B. 2010 Jun 17;114(23):7830-43
pubmed: 20496934
J Mol Biol. 1973 Apr 25;75(4):711-33
pubmed: 4738730
Biophys J. 2016 Mar 29;110(6):1355-66
pubmed: 27028645
Biophys J. 2016 Aug 23;111(4):813-823
pubmed: 27558724
Biophys J. 2004 Aug;87(2):1076-91
pubmed: 15298912
Biochim Biophys Acta Biomembr. 2018 Jun;1860(6):1272-1281
pubmed: 29499188
Int J Cosmet Sci. 2010 Aug;32(4):304-12
pubmed: 20642769
Biophys J. 2011 Aug 17;101(4):847-55
pubmed: 21843475
J Phys Chem B. 2018 Mar 15;122(10):2757-2768
pubmed: 29466860
Biophys J. 1996 Feb;70(2):595-608
pubmed: 8789079
Biophys J. 2004 Aug;87(2):1013-33
pubmed: 15298907
Langmuir. 2019 Feb 12;35(6):2078-2088
pubmed: 30645942
Biochim Biophys Acta. 2011 Jun;1808(6):1529-37
pubmed: 21036143
J Chem Phys. 2006 Oct 14;125(14):144710
pubmed: 17042634
Soft Matter. 2015 Feb 7;11(5):918-26
pubmed: 25503248
Biophys J. 1982 Mar;37(3):657-65
pubmed: 7074191
Biophys J. 2018 Jan 9;114(1):113-125
pubmed: 29320678
Proc Natl Acad Sci U S A. 1976 Nov;73(11):3862-6
pubmed: 1069270
Biochim Biophys Acta. 2015 Jul;1848(7):1552-62
pubmed: 25847499

Auteurs

Alexander Yang (A)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, Tennessee 37212, United States.
Multiscale Modeling and Simulation Center, Vanderbilt University, Nashville, Tennessee 37212, United States.

Timothy C Moore (TC)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, Tennessee 37212, United States.
Multiscale Modeling and Simulation Center, Vanderbilt University, Nashville, Tennessee 37212, United States.

Christopher R Iacovella (CR)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, Tennessee 37212, United States.
Multiscale Modeling and Simulation Center, Vanderbilt University, Nashville, Tennessee 37212, United States.

Michael Thompson (M)

GlaxoSmithKline Consumer Health Care, 184 Liberty Corner Road, Suite 200, Warren, New Jersey 07059, United States.

David J Moore (DJ)

GlaxoSmithKline Consumer Health Care, 184 Liberty Corner Road, Suite 200, Warren, New Jersey 07059, United States.

Clare McCabe (C)

Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, Tennessee 37212, United States.
Multiscale Modeling and Simulation Center, Vanderbilt University, Nashville, Tennessee 37212, United States.
Department of Chemistry, Vanderbilt University, Nashville, Tennessee 37212, United States.

Articles similaires

Photosynthesis Ribulose-Bisphosphate Carboxylase Carbon Dioxide Molecular Dynamics Simulation Cyanobacteria
Fucosyltransferases Drug Repositioning Molecular Docking Simulation Molecular Dynamics Simulation Humans
Receptor, Cannabinoid, CB1 Ligands Molecular Dynamics Simulation Protein Binding Thermodynamics

Amyloid accelerator polyphosphate fits as the mystery density in α-synuclein fibrils.

Philipp Huettemann, Pavithra Mahadevan, Justine Lempart et al.
1.00
Polyphosphates alpha-Synuclein Humans Amyloid Molecular Dynamics Simulation

Classifications MeSH