Chitinolytic proteins secreted by Cellulosimicrobium sp. NTK2.


Journal

FEMS microbiology letters
ISSN: 1574-6968
Titre abrégé: FEMS Microbiol Lett
Pays: England
ID NLM: 7705721

Informations de publication

Date de publication:
01 04 2020
Historique:
received: 21 11 2019
accepted: 24 03 2020
pubmed: 3 4 2020
medline: 31 5 2022
entrez: 3 4 2020
Statut: ppublish

Résumé

Cellulosimicrobium sp. NTK2 (NTK2 strain) was isolated as a chitinolytic bacterium from mature compost derived from chitinous waste. The growth of the NTK2 strain was enhanced by supplementation of the culture medium with 2% crystalline chitin. Approximately 70% of the supplemented crystalline chitin was degraded during cultivation. Whole genome analysis of the NTK2 strain identified eight chitinases and two chitin-binding proteins. The NTK2 strain secreted two bacterial extracellular solute-binding proteins, three family 18 glycosyl hydrolases and one lytic polysaccharide monooxygenase specifically in the presence of crystalline chitin. A chitinolytic enzyme with a molecular mass of 29 kDa on SDS-PAGE under native conditions was also secreted. This chitinolytic enzyme exhibited the largest band upon zymography but could not be identified. In an attempt to identify all the chitinases secreted by the NTK2 strain, we expressed recombinant versions of the proteins exhibiting chitinolytic activity in Escherichia coli. Our results suggest that the 29 kDa protein belonging to family 19 glycosyl hydrolase was expressed specifically in the presence of 2% crystalline chitin.

Identifiants

pubmed: 32239207
pii: 5815077
doi: 10.1093/femsle/fnaa055
pii:
doi:

Substances chimiques

Bacterial Proteins 0
Chitin 1398-61-4
Mixed Function Oxygenases EC 1.-
Chitinases EC 3.2.1.14

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© FEMS 2020.

Auteurs

Daisuke Niki (D)

Department of Agricultural Science, Graduate School of Sustainability Science, Tottori University, 4-101 Koyama-Minami, Tottori 680-8553, Japan.

Akari Higashitani (A)

Department of Agricultural Science, Graduate School of Sustainability Science, Tottori University, 4-101 Koyama-Minami, Tottori 680-8553, Japan.

Haruki Osada (H)

Department of Agricultural, Life and Environmental Sciences, Faculty of Agriculture, Tottori University, 4-101 Koyama-Minami, Tottori 680-8553, Japan.

Tomohiro Bito (T)

Department of Agricultural, Life and Environmental Sciences, Faculty of Agriculture, Tottori University, 4-101 Koyama-Minami, Tottori 680-8553, Japan.

Katsuhiko Shimizu (K)

Platform for Community-Based Research and Education, Tottori University, 4-101 Koyama-Minami, Tottori 680-8550, Japan.

Jiro Arima (J)

Department of Agricultural, Life and Environmental Sciences, Faculty of Agriculture, Tottori University, 4-101 Koyama-Minami, Tottori 680-8553, Japan.

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Classifications MeSH