Biohorology and biomarkers of aging: Current state-of-the-art, challenges and opportunities.


Journal

Ageing research reviews
ISSN: 1872-9649
Titre abrégé: Ageing Res Rev
Pays: England
ID NLM: 101128963

Informations de publication

Date de publication:
07 2020
Historique:
received: 14 09 2019
revised: 06 02 2020
accepted: 22 03 2020
pubmed: 10 4 2020
medline: 4 11 2020
entrez: 10 4 2020
Statut: ppublish

Résumé

The aging process results in multiple traceable footprints, which can be quantified and used to estimate an organism's age. Examples of such aging biomarkers include epigenetic changes, telomere attrition, and alterations in gene expression and metabolite concentrations. More than a dozen aging clocks use molecular features to predict an organism's age, each of them utilizing different data types and training procedures. Here, we offer a detailed comparison of existing mouse and human aging clocks, discuss their technological limitations and the underlying machine learning algorithms. We also discuss promising future directions of research in biohorology - the science of measuring the passage of time in living systems. Overall, we expect deep learning, deep neural networks and generative approaches to be the next power tools in this timely and actively developing field.

Identifiants

pubmed: 32272169
pii: S1568-1637(19)30258-2
doi: 10.1016/j.arr.2020.101050
pii:
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

101050

Informations de copyright

Copyright © 2020 The Authors. Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest FG, PM, AA, AZ work for Insilico Medicine, a for-profit biotechnology company developing the end-to-end target identification and drug discovery pipeline for a broad spectrum of age-related diseases. The company may have commercial interests in this publication. Products of InSilico Medicine include “Young.AI” system mentioned in this article. PM works for Deep Longevity, a for-profit longevity company. JPM is an advisor for Centaura, Longevity Vision Fund and is the founder of Magellan Science Ltd, a company providing consulting services in longevity science.

Auteurs

Fedor Galkin (F)

InSilico Medicine, Science Park, Hong Kong; Integrative Genomics of Ageing Group, Institute of Ageing and Chronic Disease, University of Liverpool, UK.

Polina Mamoshina (P)

Deep Longevity, Science Park, Hong Kong.

Alex Aliper (A)

InSilico Medicine, Science Park, Hong Kong.

João Pedro de Magalhães (JP)

Integrative Genomics of Ageing Group, Institute of Ageing and Chronic Disease, University of Liverpool, UK; Biogerontology Research Foundation, London, UK.

Vadim N Gladyshev (VN)

Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, USA.

Alex Zhavoronkov (A)

InSilico Medicine, Science Park, Hong Kong; Biogerontology Research Foundation, London, UK; Buck Institute for Research on Aging, Novato, USA. Electronic address: alex@insilicomedicine.com.

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Classifications MeSH